BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017513
         (1759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   230   8e-58
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub...   194   6e-47
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   194   8e-47
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]           187   6e-45
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...   187   6e-45

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
            predicted protein [Populus trichocarpa]
          Length = 517

 Score =  230 bits (587), Expect = 8e-58
 Identities = 120/393 (30%), Positives = 201/393 (51%), Gaps = 4/393 (1%)
 Frame = +1

Query: 22   KVVDDINKIFRNFLWTDPDCKQSHALIGWDDICYPYEEGGLGIRNIEKVNQAATMKPLWK 201
            +V+ ++ +I ++FLW+  D + + A + WD +C P +EGGLGI++I++ N+ A +K +W 
Sbjct: 121  QVIKNVEQIMKSFLWSGSDMRTTGAKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKHIWN 180

Query: 202  LITRTD-NLWVQWVQKYLVRRRGFWQLKVPSDCSSSWRNILKVRKEASSIVLHQIGNGRE 378
            L   +D ++W  W++  L+R R FW +K P +CS +W  ILK+R  A   + + IG+G  
Sbjct: 181  LCNDSDGSIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMT 240

Query: 379  TSFWDEPWHPFGILREMFPQGLLYNSSCNKQAKVANCISNGKWVFTNNVRRHISEITDAA 558
            TS W + WHP   L + + +  +Y+S   K AKV   I N +W            I +A 
Sbjct: 241  TSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAI 300

Query: 559  -ENEVEIMGDEDNIVWSAATHGEYNMKDTYDSLRGMRQEVQWHKLVWFTNKIPRHSFISW 735
              N    MG +D +VW  + +  +++K  ++ LR  RQ V+WH +VWF N +PRHSF+ W
Sbjct: 301  PSNSNPKMGQKDELVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLW 360

Query: 736  MALSGGLKTLQKMKAQKVVDSDTCIFCWRETETVEHLFHSCLIPQSLWGILLQKMGYHRT 915
            MA+   L T  K+    +   + C  C R  E   HLF  C   +++W  +  +    R 
Sbjct: 361  MAVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPR- 419

Query: 916  IETTWQGEILWIASVAQGKGIEHDTMRLMWNGFNYWIWKSRNDRIFDNKVVNVQQIARVL 1095
            +   W   I W      GK   + + +L +    Y +W+ RN RIF         +   +
Sbjct: 420  MTKGWDEWIRWATVSWHGKSFVNFSCKLSFAATVYHVWQERNARIFAGMSRTPNLVLNQI 479

Query: 1096 IGDVRSKLKVIQ--IKMNNGPEVERFTDIWNVD 1188
               +R KL +++  +  N    ++R   +  +D
Sbjct: 480  ECIIRDKLDLMRNVVPTNENTRIQRAWRVNTID 512


>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score =  194 bits (493), Expect = 6e-47
 Identities = 112/389 (28%), Positives = 199/389 (51%), Gaps = 13/389 (3%)
 Frame = +1

Query: 10   RKTSKVVDDINKIFRNFLWTDPDCKQSHALIGWDDICYPYEEGGLGIRNIEKVNQAATMK 189
            R  +  + +I+ +   FLW+ P+  +  A + W+D+C P EEGGLG+R++ + N+   +K
Sbjct: 50   RLPNACIKEIDGLCSAFLWSGPELNRKKAKVSWNDVCMPKEEGGLGLRSLTEANKVCCLK 109

Query: 190  PLWKLITRTDNLWVQWVQKYLVRRRGFWQLKVPSDCSS-SWRNILKVRKEASSIVLHQIG 366
             +W+L++ + +LWVQW+++Y++R+  FW L+  S   S  WR +LK R  AS    ++I 
Sbjct: 110  LIWRLLS-SSSLWVQWLRQYVIRKGSFWSLRDTSTLGSWMWRKLLKYRHLASGFTQYEIR 168

Query: 367  NGRETSFWDEPWHPFGILREMFPQGLLYNSSCNKQAKVANCISNGKWVFTNNVRRHISEI 546
            NG+  SFW + W P G L  +       +   +  A VA  +       T+  RRH ++ 
Sbjct: 169  NGKGVSFWHDNWSPLGPLIAISGTRGCIDMGIDIHATVAEAL-------THRRRRHRADH 221

Query: 547  TDAAENEVE------IMGDEDNIVWSAAT---HGEYNMKDTYDSLRGMRQEVQWHKLVWF 699
             +  E ++E      ++  ED ++W          ++ K+T+   R  +   +W++ +WF
Sbjct: 222  LNQMEAQLEELRTKGLVETEDVVLWKGKGGRFKPSFSTKETWADTREQKPRNEWYQGIWF 281

Query: 700  TNKIPRHSFISWMALSGGLKTLQKMKAQKVVDSDTCIFCWRETETVEHLFHSCLIPQSLW 879
            ++  P++SFI+W+A    L T  +M +     + +C+FC  +TET  HLF +C   + +W
Sbjct: 282  SHATPKYSFITWLATKNRLSTGDRMMSWNAGVNLSCVFCQEQTETRNHLFFTCRYSREVW 341

Query: 880  GILLQKMGYHRTIETTWQGEILWIASVAQGKGIEHDTMRLMWNGFN---YWIWKSRNDRI 1050
              L  K+   R   T W      I  +   K + ++ + L+   F    Y IWK RN R 
Sbjct: 342  SGLTSKL-LTRHYSTDW----TTILKLLTDKTLGNNRLFLLRYAFQILVYSIWKERNSRR 396

Query: 1051 FDNKVVNVQQIARVLIGDVRSKLKVIQIK 1137
               + +    + + L  +VR+KL  I+ K
Sbjct: 397  HGEEPLPSALLLKRLDKEVRNKLSTIRDK 425


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  194 bits (492), Expect = 8e-47
 Identities = 109/385 (28%), Positives = 194/385 (50%), Gaps = 9/385 (2%)
 Frame = +1

Query: 10   RKTSKVVDDINKIFRNFLWTDPDCKQSHALIGWDDICYPYEEGGLGIRNIEKVNQAATMK 189
            R   K + ++ K+   FLW+  +   + A I W  +C P +EGGLG+R++++ N    +K
Sbjct: 830  RLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLK 889

Query: 190  PLWKLITRTDNLWVQWVQKYLVRRRGFWQLK-VPSDCSSSWRNILKVRKEASSIVLHQIG 366
             +WK+++ +++LWV+WV ++L+R   FW++K   S  S  W+ +LK R+ A ++   ++G
Sbjct: 890  LVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWIWKKLLKYREVAKTLSKVEVG 949

Query: 367  NGRETSFWDEPWHPFGILREMFPQGLLYNSSCNKQAKVANCISNGKWVFTNNVRRHISEI 546
            NG++TSFW + W   G L E      L +   +++  V    +N         RRH +++
Sbjct: 950  NGKQTSFWYDNWSDLGQLLERTGDRGLIDLGISRRMTVEEAWTN------RRQRRHRNDV 1003

Query: 547  TDAAENEVEIMGD-----EDNIVW---SAATHGEYNMKDTYDSLRGMRQEVQWHKLVWFT 702
             +  E+ ++   D     ED ++W   S      ++ +DT+   R     V WHK++WF+
Sbjct: 1004 YNVIEDALKKSWDTRTETEDKVLWRGKSDVFRTTFSTRDTWHHTRSTSARVPWHKVIWFS 1063

Query: 703  NKIPRHSFISWMALSGGLKTLQKMKAQKVVDSDTCIFCWRETETVEHLFHSCLIPQSLWG 882
            +  P++SF SW+A  G L T  +M       +  CIFC    ET +HLF +C     +W 
Sbjct: 1064 HATPKYSFCSWLAAHGRLPTGDRMINWANGIATDCIFCQGTLETRDHLFFTCSFTSVIWV 1123

Query: 883  ILLQKMGYHRTIETTWQGEILWIASVAQGKGIEHDTMRLMWNGFNYWIWKSRNDRIFDNK 1062
             L +  G  +T  T+    I+   + +Q   +E    R ++    Y +W+ RN R     
Sbjct: 1124 DLAR--GIFKTQYTSHWQSIIEAITNSQHHRVEWFLRRYVFQATIYIVWRERNGRRHGEP 1181

Query: 1063 VVNVQQIARVLIGDVRSKLKVIQIK 1137
                 Q+   +   +R++L  I +K
Sbjct: 1182 PNTASQLVGWIDKQIRNQLSSICLK 1206


>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
          Length = 478

 Score =  187 bits (476), Expect = 6e-45
 Identities = 112/389 (28%), Positives = 189/389 (48%), Gaps = 15/389 (3%)
 Frame = +1

Query: 10   RKTSKVVDDINKIFRNFLWTDPDCKQSHALIGWDDICYPYEEGGLGIRNIEKVNQAATMK 189
            R  S  + +I+ I  +FLW+ P+     A + W D+C P +EGGLGIR++++ N+ + +K
Sbjct: 86   RLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGIRSLKEANKVSLLK 145

Query: 190  PLWKLITRTDNLWVQWVQKYLVRRRGFWQLKVPSDCSS-SWRNILKVRKEASSIVLHQIG 366
             +W++++ T +LWVQW++ YL+R+  FW +   +   S  W+ ILK R  AS  V H I 
Sbjct: 146  LIWRMLSST-SLWVQWLRLYLLRKGSFWSISGNTTLGSWMWKKILKHRALASGFVKHDIH 204

Query: 367  NGRETSFWDEPWHPFGILREMFPQGLLYNSSCNKQAKVANCISNGKWVFTNNVRRHISEI 546
            NG  TSFW + W   G L ++       +      A VA  + N      +  RRH  + 
Sbjct: 205  NGSNTSFWFDNWSKIGRLIDVTGHRGCIDMGITLHASVAEAVVN------HRPRRHRHDT 258

Query: 547  TDAAENEVE------IMGDEDNIVWSAATHGE-----YNMKDTYDSLRGMRQEVQWHKLV 693
                E+ +       +   ED + W    +G+     +N K+T+ + R  + +V W+K V
Sbjct: 259  LLRIEDVIAEVRHQGLTSGEDTVRWKG--NGDIFKPCFNTKETWAATREPKLKVNWYKGV 316

Query: 694  WFTNKIPRHSFISWMALSGGLKTLQKMKAQKVVDSDTCIFCWRETETVEHLFHSCLIPQS 873
            WF++  P++S ++W+A+   L T  +M +       +C+ C    ET +HLF +C     
Sbjct: 317  WFSHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSSCVLCHHLVETRDHLFFTCPYSAE 376

Query: 874  LWGILLQKMGYHRTIETTWQGEILWIASVAQGKGIEHDTMRLMWNGFN---YWIWKSRND 1044
            +W  L +K+   +     W+     I  +   K + H+   L    F    + +WK RN 
Sbjct: 377  VWSTLTRKL-LSQHFTNRWEA----ILKLLTNKSLGHEVPFLTRYTFQLTLHSLWKERNG 431

Query: 1045 RIFDNKVVNVQQIARVLIGDVRSKLKVIQ 1131
            R          Q+ R L   VR+++  IQ
Sbjct: 432  RRHGEVPQAAAQMVRFLDKQVRNRISSIQ 460


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  187 bits (476), Expect = 6e-45
 Identities = 111/383 (28%), Positives = 184/383 (48%), Gaps = 10/383 (2%)
 Frame = +1

Query: 10   RKTSKVVDDINKIFRNFLWTDPDCKQSHALIGWDDICYPYEEGGLGIRNIEKVNQAATMK 189
            R  S  + +IN I   FLW+ P+  +  A + WDDIC P +EGGLG+R++ + N  + +K
Sbjct: 235  RLPSACLKEINSICSAFLWSGPELHRRKAKVSWDDICKPKQEGGLGLRSLTEANVVSVLK 294

Query: 190  PLWKLITRTDNLWVQWVQKYLVRRRGFWQLKVPSDCSS-SWRNILKVRKEASSIVLHQIG 366
             +W++ +  D+LWV+W +  L+++  FW L   S   S  W+ +LK R+ A      ++ 
Sbjct: 295  LIWRVTSNDDSLWVKWSKMNLLKQESFWSLTPNSSLGSWMWKKMLKYRETAKPFSRVEVN 354

Query: 367  NGRETSFWDEPWHPFGILREMFPQGLLYNSSCNKQAKVANCISNGKWVFTNNVRRHISEI 546
            NG  TSFW + W   G L ++  Q    +   ++   VA   SN         R+H +E 
Sbjct: 355  NGARTSFWFDNWSGMGHLMDVTGQRGQIDLGISRNKTVAEAWSN------RRRRKHRTEQ 408

Query: 547  TDAAENEVEIMGDEDNIVWSAAT---------HGEYNMKDTYDSLRGMRQEVQWHKLVWF 699
             +  E  +       N++   AT            ++ KDT++ +R    EV W+K VWF
Sbjct: 409  LNDIEAALNQKYQTRNLLREDATLWRGKGDVFKTSFSTKDTWNQVRKKSNEVAWYKGVWF 468

Query: 700  TNKIPRHSFISWMALSGGLKTLQKMKAQKVVDSDTCIFCWRETETVEHLFHSCLIPQSLW 879
            ++  P++ F +W+AL   L T  +M+         C FC    ET +HLF SC    ++W
Sbjct: 469  SHSTPKYQFCTWLALRNRLSTGYRMQLWNNGSDVKCTFCSTSIETRDHLFFSCSYASAIW 528

Query: 880  GILLQKMGYHRTIETTWQGEILWIASVAQGKGIEHDTMRLMWNGFNYWIWKSRNDRIFDN 1059
              + + +  HR   T WQ  + +I S  Q   I     R ++    + +WK RNDR    
Sbjct: 529  TAIAKNVLQHR-FSTDWQTIVNYI-SETQTDRIRSFLSRYIFQLTVHTVWKERNDRRHGE 586

Query: 1060 KVVNVQQIARVLIGDVRSKLKVI 1128
            +      +   +   +R++L +I
Sbjct: 587  EPRTSANLISWMDKQIRNQLSII 609