BLASTX nr result

ID: Coptis24_contig00017510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017510
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264351.2| PREDICTED: uncharacterized protein LOC100241...   214   9e-54
emb|CBI18109.3| unnamed protein product [Vitis vinifera]              214   9e-54
ref|XP_002526678.1| breast cancer type 2 susceptibility protein ...   214   1e-53
ref|XP_002320595.1| predicted protein [Populus trichocarpa] gi|2...   202   3e-50
ref|NP_195783.3| breast cancer 2 susceptibility protein [Arabido...   196   3e-48

>ref|XP_002264351.2| PREDICTED: uncharacterized protein LOC100241398 [Vitis vinifera]
          Length = 1126

 Score =  214 bits (545), Expect = 9e-54
 Identities = 106/192 (55%), Positives = 129/192 (67%)
 Frame = -2

Query: 576  RATVKDSFGRPPCHTNQLEHVPPEVRCMNAESAATYMFHDASHLDGIGAESFHNMLAQCG 397
            R  +K+ FG  P + N LEH+  EVR MN ++A  YMF D   L  IG +  +  LAQ G
Sbjct: 466  RMYIKEYFGVLPFNKNVLEHLSDEVRWMNPDNAEKYMFPDEYGLGFIGVDDLYQRLAQSG 525

Query: 396  VSMQYVSRGWVENHYKWIVWKLACYERSYPTKATGKYLTVSNVLEELKYRYEREVNHAHR 217
             SMQY S+ W+ NHYKWI+WKLACYER YP K  G++LT+SNVLEELKYRYEREVNH HR
Sbjct: 526  ASMQYASKEWIANHYKWIIWKLACYERFYPAKHMGRFLTMSNVLEELKYRYEREVNHGHR 585

Query: 216  SALKRILEGDASPSSMVVLCISAIRFNPQKRLEQECVMAPSGDGNRFTGSKMAENCGVAK 37
            SA+KRILEGDASPS+MVVLC+SAI      ++           G        +EN   AK
Sbjct: 586  SAIKRILEGDASPSTMVVLCVSAIHSTCDMKI-----------GTHSVSINGSENSNAAK 634

Query: 36   IELTDGWYAMDA 1
            +ELTDGWY++DA
Sbjct: 635  VELTDGWYSIDA 646


>emb|CBI18109.3| unnamed protein product [Vitis vinifera]
          Length = 1134

 Score =  214 bits (545), Expect = 9e-54
 Identities = 106/192 (55%), Positives = 129/192 (67%)
 Frame = -2

Query: 576  RATVKDSFGRPPCHTNQLEHVPPEVRCMNAESAATYMFHDASHLDGIGAESFHNMLAQCG 397
            R  +K+ FG  P + N LEH+  EVR MN ++A  YMF D   L  IG +  +  LAQ G
Sbjct: 489  RMYIKEYFGVLPFNKNVLEHLSDEVRWMNPDNAEKYMFPDEYGLGFIGVDDLYQRLAQSG 548

Query: 396  VSMQYVSRGWVENHYKWIVWKLACYERSYPTKATGKYLTVSNVLEELKYRYEREVNHAHR 217
             SMQY S+ W+ NHYKWI+WKLACYER YP K  G++LT+SNVLEELKYRYEREVNH HR
Sbjct: 549  ASMQYASKEWIANHYKWIIWKLACYERFYPAKHMGRFLTMSNVLEELKYRYEREVNHGHR 608

Query: 216  SALKRILEGDASPSSMVVLCISAIRFNPQKRLEQECVMAPSGDGNRFTGSKMAENCGVAK 37
            SA+KRILEGDASPS+MVVLC+SAI      ++           G        +EN   AK
Sbjct: 609  SAIKRILEGDASPSTMVVLCVSAIHSTCDMKI-----------GTHSVSINGSENSNAAK 657

Query: 36   IELTDGWYAMDA 1
            +ELTDGWY++DA
Sbjct: 658  VELTDGWYSIDA 669


>ref|XP_002526678.1| breast cancer type 2 susceptibility protein brca2, putative [Ricinus
            communis] gi|223533978|gb|EEF35700.1| breast cancer type
            2 susceptibility protein brca2, putative [Ricinus
            communis]
          Length = 1156

 Score =  214 bits (544), Expect = 1e-53
 Identities = 105/195 (53%), Positives = 137/195 (70%)
 Frame = -2

Query: 585  QVARATVKDSFGRPPCHTNQLEHVPPEVRCMNAESAATYMFHDASHLDGIGAESFHNMLA 406
            Q +R  +KD F  P    + LEH   +V C+  ++   Y F D S L G+G+E+FH+ML 
Sbjct: 474  QGSRMYIKDYFRVPSFDKSMLEHFAGQVICIKPDTVEKYTFWDESGLSGLGSEAFHDMLV 533

Query: 405  QCGVSMQYVSRGWVENHYKWIVWKLACYERSYPTKATGKYLTVSNVLEELKYRYEREVNH 226
            Q G S+Q+ S+ WV NHYKWIVWKLACY R YP K+  ++LTVSNVLEELKYRYEREVNH
Sbjct: 534  QSGASVQFASKEWVTNHYKWIVWKLACYGRFYPLKSATRFLTVSNVLEELKYRYEREVNH 593

Query: 225  AHRSALKRILEGDASPSSMVVLCISAIRFNPQKRLEQECVMAPSGDGNRFTGSKMAENCG 46
             HRSA+KRILEGDA PSSM++LCISAIR + Q ++E      P+ DG+ ++ ++      
Sbjct: 594  GHRSAIKRILEGDAPPSSMLILCISAIRISCQPKIE-----TPALDGSDYSNAE------ 642

Query: 45   VAKIELTDGWYAMDA 1
              K+ELTDGWY++DA
Sbjct: 643  --KVELTDGWYSVDA 655


>ref|XP_002320595.1| predicted protein [Populus trichocarpa] gi|222861368|gb|EEE98910.1|
            predicted protein [Populus trichocarpa]
          Length = 1186

 Score =  202 bits (515), Expect = 3e-50
 Identities = 107/195 (54%), Positives = 133/195 (68%)
 Frame = -2

Query: 585  QVARATVKDSFGRPPCHTNQLEHVPPEVRCMNAESAATYMFHDASHLDGIGAESFHNMLA 406
            QV R  +K+ FG         E+   +VR + + +A  YMF D S  D IGAE+F++ML 
Sbjct: 537  QVPRMYIKEYFGGHLSDKRLSEYFTDQVRQIKSNNADKYMFCDESGRDSIGAEAFYDMLL 596

Query: 405  QCGVSMQYVSRGWVENHYKWIVWKLACYERSYPTKATGKYLTVSNVLEELKYRYEREVNH 226
            Q G   QY S+ WV NHYKWIVWKLACYER  P K+  K+L+VSNVLEELKYRYEREVNH
Sbjct: 597  QSGALSQYASKEWVINHYKWIVWKLACYERCCPEKSAAKFLSVSNVLEELKYRYEREVNH 656

Query: 225  AHRSALKRILEGDASPSSMVVLCISAIRFNPQKRLEQECVMAPSGDGNRFTGSKMAENCG 46
             HRSA+KRILEGDA PSSM+VLCIS+I F  + ++E   V + + DG        AE+  
Sbjct: 657  GHRSAIKRILEGDAPPSSMMVLCISSIYFGCEPKVE---VPSVALDG--------AEHSN 705

Query: 45   VAKIELTDGWYAMDA 1
             AK+ELTDGWY++DA
Sbjct: 706  AAKLELTDGWYSVDA 720


>ref|NP_195783.3| breast cancer 2 susceptibility protein [Arabidopsis thaliana]
            gi|31335362|emb|CAD32572.1| breast cancer susceptibility
            protein 2b [Arabidopsis thaliana]
            gi|332002986|gb|AED90369.1| breast cancer 2
            susceptibility protein [Arabidopsis thaliana]
          Length = 1155

 Score =  196 bits (497), Expect = 3e-48
 Identities = 98/192 (51%), Positives = 128/192 (66%)
 Frame = -2

Query: 576  RATVKDSFGRPPCHTNQLEHVPPEVRCMNAESAATYMFHDASHLDGIGAESFHNMLAQCG 397
            R  +K+ FG  P  T ++++VP  VR + + +A  Y+F D S  + +GAE+F  MLA+ G
Sbjct: 508  RVYIKEFFGMHPTATTRMDYVPDHVRRIKSSNADKYVFCDESSSNKVGAETFLQMLAESG 567

Query: 396  VSMQYVSRGWVENHYKWIVWKLACYERSYPTKATGKYLTVSNVLEELKYRYEREVNHAHR 217
             S+Q+ SR WV NHY+WIVWKLACY+  YP K  G +LT++NVLEELKYRYEREVNH H 
Sbjct: 568  ASLQHASRKWVTNHYRWIVWKLACYDIYYPAKCRGNFLTITNVLEELKYRYEREVNHGHC 627

Query: 216  SALKRILEGDASPSSMVVLCISAIRFNPQKRLEQECVMAPSGDGNRFTGSKMAENCGVAK 37
            SA+KRIL GDA  SSM+VLCISAI  NP+               N    +  ++NC   K
Sbjct: 628  SAIKRILSGDAPASSMMVLCISAI--NPR-------------TDNGSQEAHCSDNCSNVK 672

Query: 36   IELTDGWYAMDA 1
            +ELTDGWY+M+A
Sbjct: 673  VELTDGWYSMNA 684


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