BLASTX nr result

ID: Coptis24_contig00017499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017499
         (1279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24395.3| unnamed protein product [Vitis vinifera]              346   6e-93
ref|XP_002328213.1| predicted protein [Populus trichocarpa] gi|2...   339   8e-91
gb|EEC68130.1| hypothetical protein OsI_36043 [Oryza sativa Indi...   338   2e-90
gb|EEE52312.1| hypothetical protein OsJ_34326 [Oryza sativa Japo...   337   3e-90
ref|XP_002272646.2| PREDICTED: uncharacterized protein LOC100259...   330   4e-88

>emb|CBI24395.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  346 bits (888), Expect = 6e-93
 Identities = 163/344 (47%), Positives = 210/344 (61%), Gaps = 10/344 (2%)
 Frame = +2

Query: 2    KQAGDDVEAVEVLE----------NNIVLRKLLRGPRYFDPQDKSWGACYNCGEEGHNAV 151
            ++ G+  +A+E+L+          +NIVLRKLLRGPRYFDP D  WGACYNCGEEGHNAV
Sbjct: 78   EKKGESDKALEILKMVEPYPVEGSDNIVLRKLLRGPRYFDPPDSGWGACYNCGEEGHNAV 137

Query: 152  NCTAKKRKKPCFICGSFDHGIRNCTQGQDCFICKKRGHRAKCCPEKHQENSRENKICLRC 331
            NC + KRKKPCF+CGS +H  + C +GQDCFICKK GHRAK CPEKH+  S+ +KICL+C
Sbjct: 138  NCASVKRKKPCFVCGSLEHNAKQCMKGQDCFICKKGGHRAKDCPEKHRSGSQNSKICLKC 197

Query: 332  GDQGHLMSTCSKDYDLGDLKDIQCYVCKRPGHLCCVDSIDPGPREVSCYNCGQSDHIGAG 511
            GD  H M +C  DY   DLK+IQCY+CK  GHLCC++ +D GP E SCY CGQ  H G  
Sbjct: 198  GDSRHDMFSCRNDYSPEDLKEIQCYICKSFGHLCCINYVDTGPIEPSCYKCGQLGHTGLA 257

Query: 512  CAKQRGEVSGAPPATLCYKCGEEGHFARGCTSFSKPDRWMAESSSPTQKNSKKGRHSSGF 691
            CA+   E +     + CY+CGE+GHFAR C S +K  +  +E S+ +++  K+ +   GF
Sbjct: 258  CARLNAETADVQTPSSCYRCGEQGHFARECKSSTKVSKRYSEVSTQSRRFLKEDKDKLGF 317

Query: 692  QSAPPDLNKNHKKKSIEYEERDFANGGRSNRKGRWIMDDPGEQERDFETGGRSKQRGGWI 871
            +SAP DL    K+K   YEER      +  ++G WI +DP                    
Sbjct: 318  KSAPKDLGMGRKRKKPWYEERGNITPRKPKQRGGWITEDP-------------------- 357

Query: 872  PDDLGDRPKRKATDSGWRSPSTSTKKAHRNTDLNIGGLNSNSQS 1003
                GD P+RKA    WRSP+T T K H+   L  G   S+  S
Sbjct: 358  ----GDSPQRKAKVKSWRSPATPTNKNHKRPMLTAGHYTSSQSS 397


>ref|XP_002328213.1| predicted protein [Populus trichocarpa] gi|222837728|gb|EEE76093.1|
            predicted protein [Populus trichocarpa]
          Length = 683

 Score =  339 bits (870), Expect = 8e-91
 Identities = 183/450 (40%), Positives = 252/450 (56%), Gaps = 41/450 (9%)
 Frame = +2

Query: 20   VEAVEVLEN----------NIVLRKLLRGPRYFDPQDKSWGACYNCGEEGHNAVNC-TAK 166
            VEA E++E+          N+VLRKLLRGPRYFDP D  W  CYNCGEEGH AVNC T  
Sbjct: 156  VEAAELVESGGATADEESVNVVLRKLLRGPRYFDPPDSGWSTCYNCGEEGHMAVNCPTPM 215

Query: 167  KRKKPCFICGSFDHGIRNCTQGQDCFICKKRGHRAKCCPEKHQENSRENKICLRCGDQGH 346
            K+ KPCF+CGS +HG + C++G+DCFICKK GHRAK CP+K+    + +KICL CG+ GH
Sbjct: 216  KKIKPCFVCGSLEHGAKQCSKGRDCFICKKSGHRAKNCPDKYNATPQSSKICLNCGESGH 275

Query: 347  LMSTCSKDYDLGDLKDIQCYVCKRPGHLCCVDSIDPGPREVSCYNCGQSDHIGAGCAKQR 526
             M +C KDY   DLK+IQCY+CK  GHLCCV S D   R+VSCY CG+  H G  C +  
Sbjct: 276  EMFSCKKDYSPNDLKEIQCYICKSFGHLCCVTSGDDSLRQVSCYRCGELGHSGLECGRLN 335

Query: 527  GEVSGAPPATLCYKCGEEGHFARGCTSFSKPDRWMAESSSPTQKNSKKGRHSSGFQSAPP 706
             E + A   +LCY+CGE GHFAR CT  +K  +   E S+PT K+ ++   S G +SAP 
Sbjct: 336  EEATMAESPSLCYRCGEGGHFARECTRSAKGGKRSRELSTPTLKSHRENNKSMGIKSAPH 395

Query: 707  DLNKNHKKKSIEYEER-DFANGGRSNRKGR----------------------WIMDDPGE 817
            DL K+ KK+  + +E+ + A+  +S  KGR                      WI DDPG+
Sbjct: 396  DLGKSRKKRKTKSKEKGNDASLQKSKHKGRRIAEDQGNLSQSTPKKSKHRGGWITDDPGD 455

Query: 818  QERDFETGGRSKQRGGWIPDDLGDRPKRKATDSGWRSPSTSTKKAHRNTDLNIG----GL 985
              +   T  +SK +GGWI +D GD  + K   + ++SPST + K H+ + +  G    G 
Sbjct: 456  IFKSTPT--KSKHKGGWISEDPGDASQSKYKKNHFKSPSTPSYKGHKISPMTSGHHMSGS 513

Query: 986  NSNSQSPWKSHNHIRRTPISHVPNYHATPLNYNSTPRTPISHVSAYPRVPITPNSHSS-- 1159
             +++ + W S +       S  P  H   L+    P     +         + ++HS+  
Sbjct: 514  QTSNNNKW-SQSGTSAFEGSATPYQHGYSLSRFGNPGNAFGN---------SGHAHSNMG 563

Query: 1160 -AYPHFPMTQGSGSAYPHIPRTPNSHGSAY 1246
             A+ HF     SG AY +  +  ++   AY
Sbjct: 564  HAHSHFSHGYNSGHAYSNSSQAYSNSSHAY 593


>gb|EEC68130.1| hypothetical protein OsI_36043 [Oryza sativa Indica Group]
          Length = 492

 Score =  338 bits (867), Expect = 2e-90
 Identities = 169/328 (51%), Positives = 205/328 (62%), Gaps = 1/328 (0%)
 Frame = +2

Query: 38   LENNIVLRKLLRGPRYFDPQDKSWGACYNCGEEGHNAVNCTAKKRKKPCFICGSFDHGIR 217
            L +NIVLRKLLR PRYFDP +     C+NCGEEGH AVNC  +KRK+PCF+CG F H  +
Sbjct: 157  LSDNIVLRKLLRIPRYFDPGETLLETCFNCGEEGHVAVNCPMEKRKRPCFVCGLFGHNSK 216

Query: 218  NCTQGQDCFICKKRGHRAKCCPEKHQENSRENKICLRCGDQGHLMSTCSKDYDLGDLKDI 397
             CTQGQDCFICKK GH AK CPEKH  N++++  CLRCG+ GH M  C+ DY   D+K+I
Sbjct: 217  QCTQGQDCFICKKGGHIAKDCPEKHNRNTQQSTFCLRCGESGHDMFGCANDYPRDDVKEI 276

Query: 398  QCYVCKRPGHLCCVDSIDPGPREVSCYNCGQSDHIGAGCAKQRGEVSGAPPATLCYKCGE 577
            +CYVC + GHLCC D  D  P+EVSCYNC Q  H G GCAKQR EVS A   TLCYKCGE
Sbjct: 277  KCYVCNQKGHLCCADFSDICPKEVSCYNCAQPGHTGLGCAKQRREVSTAATPTLCYKCGE 336

Query: 578  EGHFARGCTSFSKPDRWMAESSSPTQKNSKKGRHSSGFQSAPPDLNKNHKKKSIEYEERD 757
            EGHFARGCT  +K DR   ESS+ ++K   KG+   G +SAP D  K  K+KS  +EER 
Sbjct: 337  EGHFARGCTKNTKSDRMNGESSAYSRKKG-KGKKDFGTRSAPHDARKTSKRKSPLFEERR 395

Query: 758  FANGGRSNRKGRWIMDDPGEQERDFETGGRSKQRGGWIPDDLGDRPKRKATDSGWRSPST 937
             ++  +S  +G                        GWI DD  D+P +K   + W SPST
Sbjct: 396  NSSHFKSKARG------------------------GWIADDADDQPYKKYKPNVWASPST 431

Query: 938  STKKAHRNTDLNIGGLNSNSQSP-WKSH 1018
              KK + N   + GG  S  QS  W+ H
Sbjct: 432  -PKKQYNNHQFSSGGDYSTPQSSRWQKH 458


>gb|EEE52312.1| hypothetical protein OsJ_34326 [Oryza sativa Japonica Group]
          Length = 800

 Score =  337 bits (865), Expect = 3e-90
 Identities = 168/328 (51%), Positives = 204/328 (62%), Gaps = 1/328 (0%)
 Frame = +2

Query: 38   LENNIVLRKLLRGPRYFDPQDKSWGACYNCGEEGHNAVNCTAKKRKKPCFICGSFDHGIR 217
            L +NIVLRKLLR PRYFDP +     C+NCGEEGH AVNC  +KRK+PCF+CG F H  +
Sbjct: 194  LSDNIVLRKLLRIPRYFDPGETLLETCFNCGEEGHVAVNCPMEKRKRPCFVCGLFGHNSK 253

Query: 218  NCTQGQDCFICKKRGHRAKCCPEKHQENSRENKICLRCGDQGHLMSTCSKDYDLGDLKDI 397
             CTQGQDCFICKK GH AK CPEKH  N++++  CLRCG+ GH M  C+ DY   D+K+I
Sbjct: 254  QCTQGQDCFICKKGGHIAKDCPEKHNRNTQQSTFCLRCGESGHDMFGCANDYPRDDVKEI 313

Query: 398  QCYVCKRPGHLCCVDSIDPGPREVSCYNCGQSDHIGAGCAKQRGEVSGAPPATLCYKCGE 577
            +CYVC + GHLCC D  D  P+EVSCYNC Q  H G GCAKQR E S A   TLCYKCGE
Sbjct: 314  KCYVCNQKGHLCCADFSDICPKEVSCYNCAQPGHTGLGCAKQRREASTAATPTLCYKCGE 373

Query: 578  EGHFARGCTSFSKPDRWMAESSSPTQKNSKKGRHSSGFQSAPPDLNKNHKKKSIEYEERD 757
            EGHFARGCT  +K DR   ESS+ ++K   KG+   G +SAP D  K  K+KS  +EER 
Sbjct: 374  EGHFARGCTKNTKSDRMNGESSAYSRKKG-KGKKDFGTRSAPHDARKTSKRKSPLFEERR 432

Query: 758  FANGGRSNRKGRWIMDDPGEQERDFETGGRSKQRGGWIPDDLGDRPKRKATDSGWRSPST 937
             ++  +S  +G                        GWI DD  D+P +K   + W SPST
Sbjct: 433  NSSHFKSKARG------------------------GWIADDADDQPYKKCKPNVWASPST 468

Query: 938  STKKAHRNTDLNIGGLNSNSQSP-WKSH 1018
              KK + N   + GG  S  QS  W+ H
Sbjct: 469  -PKKQYNNHQFSSGGDYSTPQSSRWQKH 495


>ref|XP_002272646.2| PREDICTED: uncharacterized protein LOC100259916 [Vitis vinifera]
          Length = 481

 Score =  330 bits (847), Expect = 4e-88
 Identities = 158/344 (45%), Positives = 204/344 (59%), Gaps = 10/344 (2%)
 Frame = +2

Query: 2    KQAGDDVEAVEVLE----------NNIVLRKLLRGPRYFDPQDKSWGACYNCGEEGHNAV 151
            ++ G+  +A+E+L+          +NIVLRKLLRGPRYFDP D  WGACYNCGEEGHNAV
Sbjct: 127  EKKGESDKALEILKMVEPYPVEGSDNIVLRKLLRGPRYFDPPDSGWGACYNCGEEGHNAV 186

Query: 152  NCTAKKRKKPCFICGSFDHGIRNCTQGQDCFICKKRGHRAKCCPEKHQENSRENKICLRC 331
            NC + KRKKPCF+CGS +H  + C +GQDCFICKK GHRAK CPEKH+  S+ +KICL+C
Sbjct: 187  NCASVKRKKPCFVCGSLEHNAKQCMKGQDCFICKKGGHRAKDCPEKHRSGSQNSKICLKC 246

Query: 332  GDQGHLMSTCSKDYDLGDLKDIQCYVCKRPGHLCCVDSIDPGPREVSCYNCGQSDHIGAG 511
            GD  H M +C  DY   DLK+IQCY+CK  GHLCC++ +D GP E SCY CGQ  H G  
Sbjct: 247  GDSRHDMFSCRNDYSPEDLKEIQCYICKSFGHLCCINYVDTGPIEPSCYKCGQLGHTGLA 306

Query: 512  CAKQRGEVSGAPPATLCYKCGEEGHFARGCTSFSKPDRWMAESSSPTQKNSKKGRHSSGF 691
            CA+   E +     + CY+CGE+GHF           +  +E S+ +++  K+ +   GF
Sbjct: 307  CARLNAETADVQTPSSCYRCGEQGHFV---------SKRYSEVSTQSRRFLKEDKDKLGF 357

Query: 692  QSAPPDLNKNHKKKSIEYEERDFANGGRSNRKGRWIMDDPGEQERDFETGGRSKQRGGWI 871
            +SAP DL    K+K   YEER      +  ++G WI +DP                    
Sbjct: 358  KSAPKDLGMGRKRKKPWYEERGNITPRKPKQRGGWITEDP-------------------- 397

Query: 872  PDDLGDRPKRKATDSGWRSPSTSTKKAHRNTDLNIGGLNSNSQS 1003
                GD P+RKA    WRSP+T T K H+   L  G   S+  S
Sbjct: 398  ----GDSPQRKAKVKSWRSPATPTNKNHKRPMLTAGHYTSSQSS 437


Top