BLASTX nr result

ID: Coptis24_contig00017495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017495
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273879.1| PREDICTED: riboflavin biosynthesis protein R...   286   9e-76
emb|CAB45891.1| putative protein [Arabidopsis thaliana] gi|72688...   279   1e-73
gb|AAM67209.1| probable riboflavin biosynthesis related protein ...   279   1e-73
ref|NP_567618.1| diaminohydroxyphosphoribosylaminopyrimidine dea...   279   1e-73
ref|XP_002869918.1| cytidine/deoxycytidylate deaminase family pr...   279   2e-73

>ref|XP_002273879.1| PREDICTED: riboflavin biosynthesis protein RibD-like [Vitis
           vinifera]
          Length = 379

 Score =  286 bits (733), Expect = 9e-76
 Identities = 135/169 (79%), Positives = 153/169 (90%), Gaps = 6/169 (3%)
 Frame = -1

Query: 491 MRNQISLFGVKCE------DDAFYMRRCVEIANKAIGCTTPNPMVGCVIVKDGSIVGQGF 330
           +R+   L  V+CE      DD FYMRRCVE+A KAIGCT+PNPMVGCVIVKDG +VG+GF
Sbjct: 8   LRSYGGLVSVRCEALQGKEDDGFYMRRCVELARKAIGCTSPNPMVGCVIVKDGKVVGEGF 67

Query: 329 HPKAGQPHAEVFALRDAGDLAENATAYVSLEPCNHYGRTPPCTEALIRAKVRRVVVGMVD 150
           HPKAGQPH EVFALRDAGDLAENATAYVSLEPCNHYGRTPPCTEALI+AKV++VV+GMVD
Sbjct: 68  HPKAGQPHGEVFALRDAGDLAENATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVIGMVD 127

Query: 149 PNPIVASKGVERLKESGIDVTVGVEEELCKKLNEAYIHRMLTGKPFLTL 3
           PNPIVASKGV+RL+++GI+VTV VEEELCKKLNEAYIH+MLTGKPF+TL
Sbjct: 128 PNPIVASKGVDRLRDAGIEVTVAVEEELCKKLNEAYIHQMLTGKPFVTL 176


>emb|CAB45891.1| putative protein [Arabidopsis thaliana] gi|7268893|emb|CAB79096.1|
           putative protein [Arabidopsis thaliana]
           gi|45268463|gb|AAS55854.1| pyrimidine deaminase
           [synthetic construct]
          Length = 363

 Score =  279 bits (714), Expect = 1e-73
 Identities = 129/150 (86%), Positives = 142/150 (94%)
 Frame = -1

Query: 452 DDAFYMRRCVEIANKAIGCTTPNPMVGCVIVKDGSIVGQGFHPKAGQPHAEVFALRDAGD 273
           DD+FYMR+CVE+A +AIGCT+PNPMVGCVIVKDG IVGQGFHPKAGQPHAEVFALRDAG+
Sbjct: 10  DDSFYMRKCVELAKRAIGCTSPNPMVGCVIVKDGDIVGQGFHPKAGQPHAEVFALRDAGE 69

Query: 272 LAENATAYVSLEPCNHYGRTPPCTEALIRAKVRRVVVGMVDPNPIVASKGVERLKESGID 93
           LAENATAYVSLEPCNHYGRTPPCTEALI+AKVRRVV+GMVDPNPIV S G+ RLK++GID
Sbjct: 70  LAENATAYVSLEPCNHYGRTPPCTEALIKAKVRRVVIGMVDPNPIVFSSGISRLKDAGID 129

Query: 92  VTVGVEEELCKKLNEAYIHRMLTGKPFLTL 3
           VTV VEEELCKK+NE +IHRMLTGKPFL L
Sbjct: 130 VTVSVEEELCKKMNEGFIHRMLTGKPFLAL 159


>gb|AAM67209.1| probable riboflavin biosynthesis related protein [Arabidopsis
           thaliana]
          Length = 426

 Score =  279 bits (714), Expect = 1e-73
 Identities = 129/150 (86%), Positives = 142/150 (94%)
 Frame = -1

Query: 452 DDAFYMRRCVEIANKAIGCTTPNPMVGCVIVKDGSIVGQGFHPKAGQPHAEVFALRDAGD 273
           DD+FYMR+CVE+A +AIGCT+PNPMVGCVIVKDG IVGQGFHPKAGQPHAEVFALRDAG+
Sbjct: 73  DDSFYMRKCVELAKRAIGCTSPNPMVGCVIVKDGDIVGQGFHPKAGQPHAEVFALRDAGE 132

Query: 272 LAENATAYVSLEPCNHYGRTPPCTEALIRAKVRRVVVGMVDPNPIVASKGVERLKESGID 93
           LAENATAYVSLEPCNHYGRTPPCTEALI+AKVRRVV+GMVDPNPIV S G+ RLK++GID
Sbjct: 133 LAENATAYVSLEPCNHYGRTPPCTEALIKAKVRRVVIGMVDPNPIVFSSGISRLKDAGID 192

Query: 92  VTVGVEEELCKKLNEAYIHRMLTGKPFLTL 3
           VTV VEEELCKK+NE +IHRMLTGKPFL L
Sbjct: 193 VTVSVEEELCKKMNEGFIHRMLTGKPFLAL 222


>ref|NP_567618.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Arabidopsis thaliana] gi|26452452|dbj|BAC43311.1|
           unknown protein [Arabidopsis thaliana]
           gi|29824151|gb|AAP04036.1| unknown protein [Arabidopsis
           thaliana] gi|332658979|gb|AEE84379.1|
           diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Arabidopsis thaliana]
          Length = 426

 Score =  279 bits (714), Expect = 1e-73
 Identities = 129/150 (86%), Positives = 142/150 (94%)
 Frame = -1

Query: 452 DDAFYMRRCVEIANKAIGCTTPNPMVGCVIVKDGSIVGQGFHPKAGQPHAEVFALRDAGD 273
           DD+FYMR+CVE+A +AIGCT+PNPMVGCVIVKDG IVGQGFHPKAGQPHAEVFALRDAG+
Sbjct: 73  DDSFYMRKCVELAKRAIGCTSPNPMVGCVIVKDGDIVGQGFHPKAGQPHAEVFALRDAGE 132

Query: 272 LAENATAYVSLEPCNHYGRTPPCTEALIRAKVRRVVVGMVDPNPIVASKGVERLKESGID 93
           LAENATAYVSLEPCNHYGRTPPCTEALI+AKVRRVV+GMVDPNPIV S G+ RLK++GID
Sbjct: 133 LAENATAYVSLEPCNHYGRTPPCTEALIKAKVRRVVIGMVDPNPIVFSSGISRLKDAGID 192

Query: 92  VTVGVEEELCKKLNEAYIHRMLTGKPFLTL 3
           VTV VEEELCKK+NE +IHRMLTGKPFL L
Sbjct: 193 VTVSVEEELCKKMNEGFIHRMLTGKPFLAL 222


>ref|XP_002869918.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297315754|gb|EFH46177.1|
           cytidine/deoxycytidylate deaminase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 426

 Score =  279 bits (713), Expect = 2e-73
 Identities = 129/150 (86%), Positives = 143/150 (95%)
 Frame = -1

Query: 452 DDAFYMRRCVEIANKAIGCTTPNPMVGCVIVKDGSIVGQGFHPKAGQPHAEVFALRDAGD 273
           DD+FYMR+CVE+A +AIGCT+PNPMVGCVIVKDG IVGQGFHPKAGQPHAEVFALRDAG+
Sbjct: 73  DDSFYMRKCVELAKRAIGCTSPNPMVGCVIVKDGDIVGQGFHPKAGQPHAEVFALRDAGE 132

Query: 272 LAENATAYVSLEPCNHYGRTPPCTEALIRAKVRRVVVGMVDPNPIVASKGVERLKESGID 93
           LAENATAYVSLEPCNHYGRTPPCTEALI+AKV+RVVVGMVDPNPIV+S G+ RLK++GID
Sbjct: 133 LAENATAYVSLEPCNHYGRTPPCTEALIKAKVKRVVVGMVDPNPIVSSSGISRLKDAGID 192

Query: 92  VTVGVEEELCKKLNEAYIHRMLTGKPFLTL 3
           VTVGVEEELCKK+NE +IHRMLT KPFL L
Sbjct: 193 VTVGVEEELCKKMNEGFIHRMLTEKPFLAL 222


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