BLASTX nr result

ID: Coptis24_contig00017374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017374
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19280.3| unnamed protein product [Vitis vinifera]               85   5e-15
ref|XP_002283768.1| PREDICTED: uncharacterized protein LOC100248...    85   5e-15
emb|CAN68129.1| hypothetical protein VITISV_043707 [Vitis vinifera]    85   5e-15
ref|XP_004134583.1| PREDICTED: geranylgeranyl transferase type-2...    83   2e-14
ref|XP_003563406.1| PREDICTED: uncharacterized protein LOC100838...    79   3e-13

>emb|CBI19280.3| unnamed protein product [Vitis vinifera]
          Length = 269

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 47/102 (46%), Positives = 58/102 (56%), Gaps = 9/102 (8%)
 Frame = +1

Query: 1   SYGAWYHRKWILNK---------RLLSSYDQEADGRNFHA*NYRRWLSGFGWGKVP*CAV 153
           SYGAW+HRKW+L+K         +LL  + Q AD RNFHA NYRR               
Sbjct: 104 SYGAWHHRKWVLSKGHSSVDHELQLLDRF-QRADSRNFHAWNYRR--------------- 147

Query: 154 TLSFLLSFSKFVAALKNVPKEEEIKFTTEMICHNFSNYSAWH 279
                     F+AALK +P EEE+K+TT++I  NFSNYSAWH
Sbjct: 148 ----------FIAALKGIPDEEELKYTTKLIETNFSNYSAWH 179


>ref|XP_002283768.1| PREDICTED: uncharacterized protein LOC100248920 [Vitis vinifera]
          Length = 704

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 47/102 (46%), Positives = 58/102 (56%), Gaps = 9/102 (8%)
 Frame = +1

Query: 1   SYGAWYHRKWILNK---------RLLSSYDQEADGRNFHA*NYRRWLSGFGWGKVP*CAV 153
           SYGAW+HRKW+L+K         +LL  + Q AD RNFHA NYRR               
Sbjct: 104 SYGAWHHRKWVLSKGHSSVDHELQLLDRF-QRADSRNFHAWNYRR--------------- 147

Query: 154 TLSFLLSFSKFVAALKNVPKEEEIKFTTEMICHNFSNYSAWH 279
                     F+AALK +P EEE+K+TT++I  NFSNYSAWH
Sbjct: 148 ----------FIAALKGIPDEEELKYTTKLIETNFSNYSAWH 179


>emb|CAN68129.1| hypothetical protein VITISV_043707 [Vitis vinifera]
          Length = 542

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 47/102 (46%), Positives = 58/102 (56%), Gaps = 9/102 (8%)
 Frame = +1

Query: 1   SYGAWYHRKWILNK---------RLLSSYDQEADGRNFHA*NYRRWLSGFGWGKVP*CAV 153
           SYGAW+HRKW+L+K         +LL  + Q AD RNFHA NYRR               
Sbjct: 104 SYGAWHHRKWVLSKGHSSVDHELQLLDRF-QRADSRNFHAWNYRR--------------- 147

Query: 154 TLSFLLSFSKFVAALKNVPKEEEIKFTTEMICHNFSNYSAWH 279
                     F+AALK +P EEE+K+TT++I  NFSNYSAWH
Sbjct: 148 ----------FIAALKGIPDEEELKYTTKLIETNFSNYSAWH 179


>ref|XP_004134583.1| PREDICTED: geranylgeranyl transferase type-2 subunit alpha-like
           [Cucumis sativus] gi|449490592|ref|XP_004158649.1|
           PREDICTED: geranylgeranyl transferase type-2 subunit
           alpha-like [Cucumis sativus]
          Length = 695

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 47/102 (46%), Positives = 58/102 (56%), Gaps = 9/102 (8%)
 Frame = +1

Query: 1   SYGAWYHRKWILNK---------RLLSSYDQEADGRNFHA*NYRRWLSGFGWGKVP*CAV 153
           SYGAWYHRK+IL+K         RLL  + Q+ D RNFHA NYRR               
Sbjct: 104 SYGAWYHRKYILSKGHSSTDHELRLLGKF-QKLDARNFHAWNYRR--------------- 147

Query: 154 TLSFLLSFSKFVAALKNVPKEEEIKFTTEMICHNFSNYSAWH 279
                     FVA L N+P+++E+K+TT+MI  NFSNYSAWH
Sbjct: 148 ----------FVAGLMNIPEDKELKYTTDMIDTNFSNYSAWH 179


>ref|XP_003563406.1| PREDICTED: uncharacterized protein LOC100838450 [Brachypodium
           distachyon]
          Length = 696

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/103 (41%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
 Frame = +1

Query: 1   SYGAWYHRKWILNKRLLS-SYDQE---------ADGRNFHA*NYRRWLSGFGWGKVP*CA 150
           SYGAWYHRKW+LN++L    + +E          D RNFH  NYRR+L+ F         
Sbjct: 103 SYGAWYHRKWLLNQKLTPVDFKREFGLLDKLLKVDARNFHGWNYRRFLAKF--------- 153

Query: 151 VTLSFLLSFSKFVAALKNVPKEEEIKFTTEMICHNFSNYSAWH 279
                             VP+EEE+K+T + IC NFSNYSAWH
Sbjct: 154 ----------------MGVPEEEELKYTMDKICDNFSNYSAWH 180


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