BLASTX nr result

ID: Coptis24_contig00017363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017363
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315722.1| predicted protein [Populus trichocarpa] gi|2...   216   2e-54
ref|XP_002529323.1| transferase, putative [Ricinus communis] gi|...   210   2e-52
emb|CAN70913.1| hypothetical protein VITISV_002996 [Vitis vinifera]   210   2e-52
ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G...   209   3e-52
emb|CBI26389.3| unnamed protein product [Vitis vinifera]              209   5e-52

>ref|XP_002315722.1| predicted protein [Populus trichocarpa] gi|222864762|gb|EEF01893.1|
           predicted protein [Populus trichocarpa]
          Length = 857

 Score =  216 bits (551), Expect = 2e-54
 Identities = 112/224 (50%), Positives = 149/224 (66%), Gaps = 2/224 (0%)
 Frame = +3

Query: 9   QKEMDAKHPLHVSQVHHPSATINKIQALVFSISXXXXXXXRFSTLFVNKNRE--IPTFPW 182
           +K M+   PLH+  V   S  IN++  L+ SI+       R S LF     +  +P   W
Sbjct: 43  EKLMEISPPLHLCHVSKTSIFINRLHGLLHSIAIAFLIYYRASFLFQEPQTKATVPMLLW 102

Query: 183 LLVAVSELANSLYYISSKAYRWKPVSRTVFPKRLPSDEKLPSIDVFICTCDPNKEPTLQV 362
           LLV V+EL  S  ++  +AY W PVSRTVFP+RLP D+KLP+IDVFICT DP+KEPTL V
Sbjct: 103 LLVFVAELLLSFIWLIGQAYHWHPVSRTVFPERLPEDDKLPAIDVFICTVDPDKEPTLDV 162

Query: 363 MNTVISAMCLDYPTDKLSLYLSDDAGAPITLYGTREAYKFAMKWIPFCKKYGIKTSAPEA 542
           MNTV+SAM LDYP +KL+LYLSDD GA +TL+G +EA++FA  W+PFCKKYGIKT  P+A
Sbjct: 163 MNTVLSAMALDYPAEKLNLYLSDDGGAAVTLHGMKEAWRFAKSWLPFCKKYGIKTRCPKA 222

Query: 543 YFSKLQLIDGEEQPQLSTDKFLNNLKEIKSNYELFKKCLEKARE 674
           YFS     D       S+++F+ + + I+  YE FK+ + + RE
Sbjct: 223 YFSATSKDDDSFG---SSNEFMADRQIIQEKYEDFKERVMRFRE 263


>ref|XP_002529323.1| transferase, putative [Ricinus communis]
           gi|223531247|gb|EEF33092.1| transferase, putative
           [Ricinus communis]
          Length = 570

 Score =  210 bits (534), Expect = 2e-52
 Identities = 114/224 (50%), Positives = 142/224 (63%), Gaps = 5/224 (2%)
 Frame = +3

Query: 18  MDAKHPLHV--SQVHHPSATINKIQALVFSISXXXXXXXRFSTLFVNK---NREIPTFPW 182
           MD   PLH+    VH     I+K  A V  I+       R S LF N     R I T PW
Sbjct: 1   MDDSFPLHICNKNVHTLFIIISKSHAFVHCIAITFLIHYRTSFLFHNPIGIGRLIVTIPW 60

Query: 183 LLVAVSELANSLYYISSKAYRWKPVSRTVFPKRLPSDEKLPSIDVFICTCDPNKEPTLQV 362
           LLV  SE+     ++   AYRW+P+SRTVFP+RLP D KLP IDVFICT DPNKEPT+ V
Sbjct: 61  LLVFFSEILLFFAWLLGLAYRWRPISRTVFPERLPEDGKLPGIDVFICTADPNKEPTIDV 120

Query: 363 MNTVISAMCLDYPTDKLSLYLSDDAGAPITLYGTREAYKFAMKWIPFCKKYGIKTSAPEA 542
           MNTV+SAM LDYP +KL +YLSDD GA ITL+G +EA++FA  W+PFC++YGIKT  P+A
Sbjct: 121 MNTVLSAMALDYPAEKLHIYLSDDGGASITLHGIKEAWQFARWWLPFCRRYGIKTRCPKA 180

Query: 543 YFSKLQLIDGEEQPQLSTDKFLNNLKEIKSNYELFKKCLEKARE 674
           YFS       E+    +T +F+ +  +IK  YE  K  + KARE
Sbjct: 181 YFSGAAA--AEDNIFDNTPEFVADRLKIKDKYEKMKDNIMKARE 222


>emb|CAN70913.1| hypothetical protein VITISV_002996 [Vitis vinifera]
          Length = 643

 Score =  210 bits (534), Expect = 2e-52
 Identities = 106/220 (48%), Positives = 142/220 (64%), Gaps = 3/220 (1%)
 Frame = +3

Query: 18  MDAKHPLHVSQVHHPSATINKIQALVFSISXXXXXXXRFSTLFVN---KNREIPTFPWLL 188
           M+   P H+  V   SA IN+  AL+ S +       R S L  N   ++   P  PWLL
Sbjct: 1   MEGSLPRHLCHVQKSSAIINRFHALIHSTALIALIYYRASFLLQNNDTRSGHTPIIPWLL 60

Query: 189 VAVSELANSLYYISSKAYRWKPVSRTVFPKRLPSDEKLPSIDVFICTCDPNKEPTLQVMN 368
           V   EL  S  ++  +A+RW+PV+R VFP+RLP D++LPSID FICT DP KEPTL+VMN
Sbjct: 61  VFAGELVLSFIWLLDQAFRWRPVTRAVFPERLPEDKQLPSIDXFICTVDPKKEPTLEVMN 120

Query: 369 TVISAMCLDYPTDKLSLYLSDDAGAPITLYGTREAYKFAMKWIPFCKKYGIKTSAPEAYF 548
           TVISAM LDYP +KL +Y+SDD G+ +TLYG +EA++FA  W+PFC+ +GIKT  P+AYF
Sbjct: 121 TVISAMALDYPPEKLHVYVSDDGGSSLTLYGMKEAWEFARSWVPFCRTHGIKTPCPKAYF 180

Query: 549 SKLQLIDGEEQPQLSTDKFLNNLKEIKSNYELFKKCLEKA 668
           S L+  DG+    L T+ F+   + ++  YE FK  L  A
Sbjct: 181 SSLE--DGDGSEFLGTE-FMAERRRVQIEYEKFKATLRTA 217


>ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera]
          Length = 733

 Score =  209 bits (533), Expect = 3e-52
 Identities = 107/221 (48%), Positives = 144/221 (65%), Gaps = 2/221 (0%)
 Frame = +3

Query: 18  MDAKHPLHVSQVHHPSATINKIQALVFSISXXXXXXXRFSTLFVN-KNR-EIPTFPWLLV 191
           MD+  PL +  V   +A IN+   L+ S +       R S LF N +NR   PT PWLLV
Sbjct: 1   MDSSLPLQLCYVRKSTAIINRWYTLIHSTALMALVYYRASFLFQNPENRAHTPTSPWLLV 60

Query: 192 AVSELANSLYYISSKAYRWKPVSRTVFPKRLPSDEKLPSIDVFICTCDPNKEPTLQVMNT 371
              EL  S  ++  +AYRW+PV+RT+FP+RLP D+ LP+IDVFICT DP +EPT  VMNT
Sbjct: 61  FAGELILSFIWLLGQAYRWRPVTRTLFPERLPEDKHLPAIDVFICTADPKREPTFGVMNT 120

Query: 372 VISAMCLDYPTDKLSLYLSDDAGAPITLYGTREAYKFAMKWIPFCKKYGIKTSAPEAYFS 551
           VISAM LDYP ++L +Y+SDD G+ +TLYG +EA+ FA  W+PFC+ +GIKT  PEAYFS
Sbjct: 121 VISAMALDYPPERLHVYVSDDGGSSLTLYGMKEAWAFARSWLPFCRTHGIKTRCPEAYFS 180

Query: 552 KLQLIDGEEQPQLSTDKFLNNLKEIKSNYELFKKCLEKARE 674
                + +E   L   +F    K+IK  +ELF++ + +A E
Sbjct: 181 S---AENDEGADLRGTEFFEERKKIKKEFELFRERVMRATE 218


>emb|CBI26389.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  209 bits (531), Expect = 5e-52
 Identities = 106/223 (47%), Positives = 145/223 (65%), Gaps = 3/223 (1%)
 Frame = +3

Query: 9   QKEMDAKHPLHVSQVHHPSATINKIQALVFSISXXXXXXXRFSTLFVN---KNREIPTFP 179
           ++ M+   P H+  V   SA I++  AL+ S +       R S L  N   ++   P  P
Sbjct: 47  KEAMEGSLPRHLCHVQKSSAIIHRFHALIHSTALIALIYYRASFLLQNNDTRSGHTPIIP 106

Query: 180 WLLVAVSELANSLYYISSKAYRWKPVSRTVFPKRLPSDEKLPSIDVFICTCDPNKEPTLQ 359
           WLLV   EL  S  ++  +A+RW+PV+R VFP+RLP D++LPSIDVFICT DP KEPTL+
Sbjct: 107 WLLVFAGELVLSFIWLLEQAFRWRPVTRAVFPERLPEDKQLPSIDVFICTVDPKKEPTLE 166

Query: 360 VMNTVISAMCLDYPTDKLSLYLSDDAGAPITLYGTREAYKFAMKWIPFCKKYGIKTSAPE 539
           VMNTVISAM LDYP +KL +Y+SDD G+ +TLYG +EA++FA  W+PFC+ +GIKT  P+
Sbjct: 167 VMNTVISAMALDYPPEKLHVYVSDDGGSSLTLYGMKEAWEFARLWVPFCRTHGIKTPCPK 226

Query: 540 AYFSKLQLIDGEEQPQLSTDKFLNNLKEIKSNYELFKKCLEKA 668
           AYFS L+  DG+    L T+ F+   + ++  YE FK  L  A
Sbjct: 227 AYFSSLE--DGDGSEILGTE-FMAERRRVQIEYEKFKARLRTA 266


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