BLASTX nr result

ID: Coptis24_contig00017362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017362
         (1502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281488.1| PREDICTED: tRNA (guanine-N(1)-)-methyltransf...   117   8e-24
sp|F6HH45.1|TRM52_VITVI RecName: Full=tRNA (guanine(37)-N1)-meth...   108   4e-21
emb|CBI28113.3| unnamed protein product [Vitis vinifera]              108   4e-21
gb|ACN36901.1| unknown [Zea mays]                                     107   1e-20
ref|NP_001142466.1| uncharacterized protein LOC100274674 [Zea ma...   107   1e-20

>ref|XP_002281488.1| PREDICTED: tRNA (guanine-N(1)-)-methyltransferase,
           mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  117 bits (293), Expect = 8e-24
 Identities = 72/147 (48%), Positives = 86/147 (58%), Gaps = 6/147 (4%)
 Frame = +1

Query: 1   LDERKFELKLHLWALRIPRELCKHVTRLLNGYMLDKPRIKHLNPSLKIPRVTKIVLLYYL 180
           LDE KF+L+L LWALRIP +LCK  +R+LNGY+LDKPR+K   P  + P       +   
Sbjct: 3   LDESKFDLQLKLWALRIPSQLCKVASRILNGYLLDKPRVK---PITEDPTCETNRYIILS 59

Query: 181 SRFKTLIYQRFQPKHFVR*RICAALMLCLIR*VLGTPIGA*------ILPLGVEVPSSFE 342
            R K               ++   + +      LG    +       ILP GVEVPSSFE
Sbjct: 60  ERIKNPDLSDIPEDKRDELKVLCKIEVVPYSLTLGYSYWSADHVLKQILPDGVEVPSSFE 119

Query: 343 TIGHIAHLNITGELLSYKDVIAKVIYD 423
           TIGHIAHLNITGELL YKDVIAKVIYD
Sbjct: 120 TIGHIAHLNITGELLPYKDVIAKVIYD 146


>sp|F6HH45.1|TRM52_VITVI RecName: Full=tRNA (guanine(37)-N1)-methyltransferase 2; AltName:
           Full=M1G-methyltransferase 2; AltName: Full=tRNA [GM37]
           methyltransferase 2; AltName: Full=tRNA
           methyltransferase 5 homolog 2
          Length = 510

 Score =  108 bits (270), Expect = 4e-21
 Identities = 71/151 (47%), Positives = 85/151 (56%), Gaps = 10/151 (6%)
 Frame = +1

Query: 1   LDERKFELKLHLWALRIPRELCKHVTRLLNGYMLDKPRIKHLNPSLKIPRVTKIVLLYYL 180
           LDE KF+L+L LWALRIP +LCK  +R+LNGY+LDKPR+K   P  + P       +   
Sbjct: 3   LDESKFDLQLKLWALRIPSQLCKVASRILNGYLLDKPRVK---PITEDPTCETNRYIILS 59

Query: 181 SRFKTLIYQRFQPKHFVR*RICAALMLCLIR*VLGTPIGA*------ILPLGVEVPSSFE 342
            R K               ++   + +      LG    +       ILP GVEVPSSFE
Sbjct: 60  ERIKNPDLSDIPEDKRDELKVLCKIEVVPYSLTLGYSYWSADHVLKQILPDGVEVPSSFE 119

Query: 343 TIG----HIAHLNITGELLSYKDVIAKVIYD 423
           TI     HIAHLNITGELL YKDVIAKVIYD
Sbjct: 120 TITFSLCHIAHLNITGELLPYKDVIAKVIYD 150


>emb|CBI28113.3| unnamed protein product [Vitis vinifera]
          Length = 983

 Score =  108 bits (270), Expect = 4e-21
 Identities = 71/151 (47%), Positives = 85/151 (56%), Gaps = 10/151 (6%)
 Frame = +1

Query: 1   LDERKFELKLHLWALRIPRELCKHVTRLLNGYMLDKPRIKHLNPSLKIPRVTKIVLLYYL 180
           LDE KF+L+L LWALRIP +LCK  +R+LNGY+LDKPR+K   P  + P       +   
Sbjct: 3   LDESKFDLQLKLWALRIPSQLCKVASRILNGYLLDKPRVK---PITEDPTCETNRYIILS 59

Query: 181 SRFKTLIYQRFQPKHFVR*RICAALMLCLIR*VLGTPIGA*------ILPLGVEVPSSFE 342
            R K               ++   + +      LG    +       ILP GVEVPSSFE
Sbjct: 60  ERIKNPDLSDIPEDKRDELKVLCKIEVVPYSLTLGYSYWSADHVLKQILPDGVEVPSSFE 119

Query: 343 TIG----HIAHLNITGELLSYKDVIAKVIYD 423
           TI     HIAHLNITGELL YKDVIAKVIYD
Sbjct: 120 TITFSLCHIAHLNITGELLPYKDVIAKVIYD 150


>gb|ACN36901.1| unknown [Zea mays]
          Length = 490

 Score =  107 bits (266), Expect = 1e-20
 Identities = 74/153 (48%), Positives = 90/153 (58%), Gaps = 12/153 (7%)
 Frame = +1

Query: 1   LDERKFELKLHLWALRIPRELCKHVTRLL-NGYMLDKPRIKHLNPSLKIPRVTKIVLLYY 177
           LDE KFE +L L ALRIPREL   VTRLL +GY+LDKPR+K   P ++ P   K  L+  
Sbjct: 4   LDESKFEQRLELLALRIPRELASAVTRLLRSGYLLDKPRVK---PVVEDPEGDKNRLVIL 60

Query: 178 LSRFKTLIYQRFQPKHFVR*RICAALMLCLIR*VLGT-----------PIGA*ILPLGVE 324
             R      Q+       +  + +   LC +  V  T            I   ILP GVE
Sbjct: 61  SERI-----QKPDLSDMSQQALDSLKQLCNVEVVPYTLTLGYSYWSADHILKRILPAGVE 115

Query: 325 VPSSFETIGHIAHLNITGELLSYKDVIAKVIYD 423
           VPSSFETIGH+AHLNI+ +LL+YKDVIAKVIYD
Sbjct: 116 VPSSFETIGHVAHLNISDDLLAYKDVIAKVIYD 148


>ref|NP_001142466.1| uncharacterized protein LOC100274674 [Zea mays]
           gi|195604722|gb|ACG24191.1| hypothetical protein [Zea
           mays]
          Length = 196

 Score =  107 bits (266), Expect = 1e-20
 Identities = 74/153 (48%), Positives = 90/153 (58%), Gaps = 12/153 (7%)
 Frame = +1

Query: 1   LDERKFELKLHLWALRIPRELCKHVTRLL-NGYMLDKPRIKHLNPSLKIPRVTKIVLLYY 177
           LDE KFE +L L ALRIPREL   VTRLL +GY+LDKPR+K   P ++ P   K  L+  
Sbjct: 4   LDESKFEQRLELLALRIPRELASAVTRLLRSGYLLDKPRVK---PVVEDPEGDKNRLVIL 60

Query: 178 LSRFKTLIYQRFQPKHFVR*RICAALMLCLIR*VLGT-----------PIGA*ILPLGVE 324
             R      Q+       +  + +   LC +  V  T            I   ILP GVE
Sbjct: 61  SERI-----QKPDLSDMSQQALDSLKQLCNVEVVPYTLTLGYSYWSADHILKRILPAGVE 115

Query: 325 VPSSFETIGHIAHLNITGELLSYKDVIAKVIYD 423
           VPSSFETIGH+AHLNI+ +LL+YKDVIAKVIYD
Sbjct: 116 VPSSFETIGHVAHLNISDDLLAYKDVIAKVIYD 148


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