BLASTX nr result
ID: Coptis24_contig00017362
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017362 (1502 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281488.1| PREDICTED: tRNA (guanine-N(1)-)-methyltransf... 117 8e-24 sp|F6HH45.1|TRM52_VITVI RecName: Full=tRNA (guanine(37)-N1)-meth... 108 4e-21 emb|CBI28113.3| unnamed protein product [Vitis vinifera] 108 4e-21 gb|ACN36901.1| unknown [Zea mays] 107 1e-20 ref|NP_001142466.1| uncharacterized protein LOC100274674 [Zea ma... 107 1e-20 >ref|XP_002281488.1| PREDICTED: tRNA (guanine-N(1)-)-methyltransferase, mitochondrial-like [Vitis vinifera] Length = 506 Score = 117 bits (293), Expect = 8e-24 Identities = 72/147 (48%), Positives = 86/147 (58%), Gaps = 6/147 (4%) Frame = +1 Query: 1 LDERKFELKLHLWALRIPRELCKHVTRLLNGYMLDKPRIKHLNPSLKIPRVTKIVLLYYL 180 LDE KF+L+L LWALRIP +LCK +R+LNGY+LDKPR+K P + P + Sbjct: 3 LDESKFDLQLKLWALRIPSQLCKVASRILNGYLLDKPRVK---PITEDPTCETNRYIILS 59 Query: 181 SRFKTLIYQRFQPKHFVR*RICAALMLCLIR*VLGTPIGA*------ILPLGVEVPSSFE 342 R K ++ + + LG + ILP GVEVPSSFE Sbjct: 60 ERIKNPDLSDIPEDKRDELKVLCKIEVVPYSLTLGYSYWSADHVLKQILPDGVEVPSSFE 119 Query: 343 TIGHIAHLNITGELLSYKDVIAKVIYD 423 TIGHIAHLNITGELL YKDVIAKVIYD Sbjct: 120 TIGHIAHLNITGELLPYKDVIAKVIYD 146 >sp|F6HH45.1|TRM52_VITVI RecName: Full=tRNA (guanine(37)-N1)-methyltransferase 2; AltName: Full=M1G-methyltransferase 2; AltName: Full=tRNA [GM37] methyltransferase 2; AltName: Full=tRNA methyltransferase 5 homolog 2 Length = 510 Score = 108 bits (270), Expect = 4e-21 Identities = 71/151 (47%), Positives = 85/151 (56%), Gaps = 10/151 (6%) Frame = +1 Query: 1 LDERKFELKLHLWALRIPRELCKHVTRLLNGYMLDKPRIKHLNPSLKIPRVTKIVLLYYL 180 LDE KF+L+L LWALRIP +LCK +R+LNGY+LDKPR+K P + P + Sbjct: 3 LDESKFDLQLKLWALRIPSQLCKVASRILNGYLLDKPRVK---PITEDPTCETNRYIILS 59 Query: 181 SRFKTLIYQRFQPKHFVR*RICAALMLCLIR*VLGTPIGA*------ILPLGVEVPSSFE 342 R K ++ + + LG + ILP GVEVPSSFE Sbjct: 60 ERIKNPDLSDIPEDKRDELKVLCKIEVVPYSLTLGYSYWSADHVLKQILPDGVEVPSSFE 119 Query: 343 TIG----HIAHLNITGELLSYKDVIAKVIYD 423 TI HIAHLNITGELL YKDVIAKVIYD Sbjct: 120 TITFSLCHIAHLNITGELLPYKDVIAKVIYD 150 >emb|CBI28113.3| unnamed protein product [Vitis vinifera] Length = 983 Score = 108 bits (270), Expect = 4e-21 Identities = 71/151 (47%), Positives = 85/151 (56%), Gaps = 10/151 (6%) Frame = +1 Query: 1 LDERKFELKLHLWALRIPRELCKHVTRLLNGYMLDKPRIKHLNPSLKIPRVTKIVLLYYL 180 LDE KF+L+L LWALRIP +LCK +R+LNGY+LDKPR+K P + P + Sbjct: 3 LDESKFDLQLKLWALRIPSQLCKVASRILNGYLLDKPRVK---PITEDPTCETNRYIILS 59 Query: 181 SRFKTLIYQRFQPKHFVR*RICAALMLCLIR*VLGTPIGA*------ILPLGVEVPSSFE 342 R K ++ + + LG + ILP GVEVPSSFE Sbjct: 60 ERIKNPDLSDIPEDKRDELKVLCKIEVVPYSLTLGYSYWSADHVLKQILPDGVEVPSSFE 119 Query: 343 TIG----HIAHLNITGELLSYKDVIAKVIYD 423 TI HIAHLNITGELL YKDVIAKVIYD Sbjct: 120 TITFSLCHIAHLNITGELLPYKDVIAKVIYD 150 >gb|ACN36901.1| unknown [Zea mays] Length = 490 Score = 107 bits (266), Expect = 1e-20 Identities = 74/153 (48%), Positives = 90/153 (58%), Gaps = 12/153 (7%) Frame = +1 Query: 1 LDERKFELKLHLWALRIPRELCKHVTRLL-NGYMLDKPRIKHLNPSLKIPRVTKIVLLYY 177 LDE KFE +L L ALRIPREL VTRLL +GY+LDKPR+K P ++ P K L+ Sbjct: 4 LDESKFEQRLELLALRIPRELASAVTRLLRSGYLLDKPRVK---PVVEDPEGDKNRLVIL 60 Query: 178 LSRFKTLIYQRFQPKHFVR*RICAALMLCLIR*VLGT-----------PIGA*ILPLGVE 324 R Q+ + + + LC + V T I ILP GVE Sbjct: 61 SERI-----QKPDLSDMSQQALDSLKQLCNVEVVPYTLTLGYSYWSADHILKRILPAGVE 115 Query: 325 VPSSFETIGHIAHLNITGELLSYKDVIAKVIYD 423 VPSSFETIGH+AHLNI+ +LL+YKDVIAKVIYD Sbjct: 116 VPSSFETIGHVAHLNISDDLLAYKDVIAKVIYD 148 >ref|NP_001142466.1| uncharacterized protein LOC100274674 [Zea mays] gi|195604722|gb|ACG24191.1| hypothetical protein [Zea mays] Length = 196 Score = 107 bits (266), Expect = 1e-20 Identities = 74/153 (48%), Positives = 90/153 (58%), Gaps = 12/153 (7%) Frame = +1 Query: 1 LDERKFELKLHLWALRIPRELCKHVTRLL-NGYMLDKPRIKHLNPSLKIPRVTKIVLLYY 177 LDE KFE +L L ALRIPREL VTRLL +GY+LDKPR+K P ++ P K L+ Sbjct: 4 LDESKFEQRLELLALRIPRELASAVTRLLRSGYLLDKPRVK---PVVEDPEGDKNRLVIL 60 Query: 178 LSRFKTLIYQRFQPKHFVR*RICAALMLCLIR*VLGT-----------PIGA*ILPLGVE 324 R Q+ + + + LC + V T I ILP GVE Sbjct: 61 SERI-----QKPDLSDMSQQALDSLKQLCNVEVVPYTLTLGYSYWSADHILKRILPAGVE 115 Query: 325 VPSSFETIGHIAHLNITGELLSYKDVIAKVIYD 423 VPSSFETIGH+AHLNI+ +LL+YKDVIAKVIYD Sbjct: 116 VPSSFETIGHVAHLNISDDLLAYKDVIAKVIYD 148