BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017231
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21840.3| unnamed protein product [Vitis vinifera]               59   4e-07
ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...    59   4e-07
ref|XP_002339288.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containi...    56   3e-06
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]    56   3e-06

>emb|CBI21840.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/76 (42%), Positives = 45/76 (59%)
 Frame = +3

Query: 3   ATGYVQANHLPKALKAMESAFPAIQGRRMPDRDTLSACLEYLKQQGDVMKTEEFVRLLGA 182
           A GY + N + KA+  ++ A  A      P+  TLSACLEYLK +GDV + E  +RLL  
Sbjct: 335 AAGYHENNQMEKAVDTLKKALLATSQGWKPNPVTLSACLEYLKGKGDVEEAENLIRLLRE 394

Query: 183 PGHMSTDDIERLLDYI 230
              +S  D +RL++YI
Sbjct: 395 QSLVSAYDSDRLVNYI 410


>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial [Vitis vinifera]
          Length = 499

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/76 (42%), Positives = 45/76 (59%)
 Frame = +3

Query: 3   ATGYVQANHLPKALKAMESAFPAIQGRRMPDRDTLSACLEYLKQQGDVMKTEEFVRLLGA 182
           A GY + N + KA+  ++ A  A      P+  TLSACLEYLK +GDV + E  +RLL  
Sbjct: 388 AAGYHENNQMEKAVDTLKKALLATSQGWKPNPVTLSACLEYLKGKGDVEEAENLIRLLRE 447

Query: 183 PGHMSTDDIERLLDYI 230
              +S  D +RL++YI
Sbjct: 448 QSLVSAYDSDRLVNYI 463


>ref|XP_002339288.1| predicted protein [Populus trichocarpa] gi|222874812|gb|EEF11943.1|
           predicted protein [Populus trichocarpa]
          Length = 140

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
 Frame = +3

Query: 6   TGYVQANHLPKALKAMESAFPAIQGRRM-PDRDTLSACLEYLKQQGDVMKTEEFVRLLGA 182
           TGY++     KA++AM+     + GRR  P  ++L+ CLEYLK++GD+ K ++F+ LL  
Sbjct: 45  TGYLRNGQTLKAMEAMKKEV-VVSGRRWKPSNESLATCLEYLKEEGDLEKVKDFMELLRR 103

Query: 183 PGHMSTDDIERLLDYI 230
              +S D  ERLL++I
Sbjct: 104 NDIISLDIQERLLNHI 119


>ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Vitis vinifera]
          Length = 494

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/76 (38%), Positives = 43/76 (56%)
 Frame = +3

Query: 3   ATGYVQANHLPKALKAMESAFPAIQGRRMPDRDTLSACLEYLKQQGDVMKTEEFVRLLGA 182
           A GY++ + +PKA++A++ A         P ++TL+ CLEYL+   DV    EF+R L  
Sbjct: 402 ANGYLEDSQIPKAVEALKKAVVVCPPNWKPSKNTLATCLEYLEGNRDVEGAGEFIRFLQN 461

Query: 183 PGHMSTDDIERLLDYI 230
            G  S    +RLL YI
Sbjct: 462 EGIFSVGVCKRLLSYI 477


>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
          Length = 499

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/76 (40%), Positives = 44/76 (57%)
 Frame = +3

Query: 3   ATGYVQANHLPKALKAMESAFPAIQGRRMPDRDTLSACLEYLKQQGDVMKTEEFVRLLGA 182
           A GY + N + KA+  ++ A  A      P+  TLSACLEYLK + DV + E  +RLL  
Sbjct: 388 AAGYHENNQMEKAVDTLKKALLATSQGWKPNPVTLSACLEYLKGKXDVEEAENLIRLLRE 447

Query: 183 PGHMSTDDIERLLDYI 230
              +S  D +RL++YI
Sbjct: 448 QSLVSAYDSDRLVNYI 463