BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017226
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634690.1| PREDICTED: cytochrome b6-f complex iron-sulf...    90   2e-16
ref|XP_002284361.1| PREDICTED: cytochrome b6-f complex iron-sulf...    90   2e-16
sp|P30361.2|UCRIA_TOBAC RecName: Full=Cytochrome b6-f complex ir...    89   5e-16
emb|CAA45705.1| Rieske Fe/S protein of cytochrome b6/f complex [...    89   5e-16
ref|XP_002265183.2| PREDICTED: cytochrome b6-f complex iron-sulf...    88   6e-16

>ref|XP_003634690.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic isoform 2 [Vitis vinifera]
          Length = 244

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 39/40 (97%), Positives = 40/40 (100%)
 Frame = -1

Query: 245 VRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGQDPWWA 126
           VRGPAPLSLALAHADIDDGKVLFVPWVETDFRTG+DPWWA
Sbjct: 205 VRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGEDPWWA 244


>ref|XP_002284361.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic isoform 1 [Vitis vinifera]
           gi|147826727|emb|CAN66108.1| hypothetical protein
           VITISV_020089 [Vitis vinifera]
           gi|302143099|emb|CBI20394.3| unnamed protein product
           [Vitis vinifera]
          Length = 228

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 39/40 (97%), Positives = 40/40 (100%)
 Frame = -1

Query: 245 VRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGQDPWWA 126
           VRGPAPLSLALAHADIDDGKVLFVPWVETDFRTG+DPWWA
Sbjct: 189 VRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGEDPWWA 228


>sp|P30361.2|UCRIA_TOBAC RecName: Full=Cytochrome b6-f complex iron-sulfur subunit 1,
           chloroplastic; AltName:
           Full=Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein 1; AltName: Full=Rieske iron-sulfur
           protein 1; Short=ISP 1; Short=RISP 1; Flags: Precursor
           gi|19995|emb|CAA46808.1| Rieske FeS [Nicotiana tabacum]
          Length = 228

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 38/40 (95%), Positives = 40/40 (100%)
 Frame = -1

Query: 245 VRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGQDPWWA 126
           VRGPAPLSLALAHADIDDGKV+FVPWVETDFRTG+DPWWA
Sbjct: 189 VRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWWA 228


>emb|CAA45705.1| Rieske Fe/S protein of cytochrome b6/f complex [Nicotiana tabacum]
          Length = 228

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 38/40 (95%), Positives = 40/40 (100%)
 Frame = -1

Query: 245 VRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGQDPWWA 126
           VRGPAPLSLALAHADIDDGKV+FVPWVETDFRTG+DPWWA
Sbjct: 189 VRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWWA 228


>ref|XP_002265183.2| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic-like [Vitis vinifera]
          Length = 212

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 37/40 (92%), Positives = 40/40 (100%)
 Frame = -1

Query: 245 VRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGQDPWWA 126
           VRGPAPLSLALAHADIDDGKV+F+PWVETDFRTG+DPWWA
Sbjct: 173 VRGPAPLSLALAHADIDDGKVVFIPWVETDFRTGEDPWWA 212