BLASTX nr result

ID: Coptis24_contig00017214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017214
         (1105 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268798.2| PREDICTED: uncharacterized protein LOC100251...   409   e-112
ref|XP_002270754.1| PREDICTED: uncharacterized membrane protein ...   398   e-108
ref|XP_002327403.1| predicted protein [Populus trichocarpa] gi|2...   398   e-108
ref|XP_002298207.1| predicted protein [Populus trichocarpa] gi|2...   397   e-108
ref|XP_002530466.1| conserved hypothetical protein [Ricinus comm...   396   e-108

>ref|XP_002268798.2| PREDICTED: uncharacterized protein LOC100251745 [Vitis vinifera]
          Length = 573

 Score =  409 bits (1050), Expect = e-112
 Identities = 206/316 (65%), Positives = 232/316 (73%), Gaps = 9/316 (2%)
 Frame = +1

Query: 184  MAVLKAGSRPPWVGLGAAVWVQIAAGNAYNFPLYSHSLKSVLGFSQQQLTMLGVANDIGE 363
            M  LKAGSRPPWVGLGAAVWVQIA+GNAY FPLYSHSLKSVLGF+Q QLTMLGVANDIGE
Sbjct: 1    MVTLKAGSRPPWVGLGAAVWVQIASGNAYTFPLYSHSLKSVLGFNQHQLTMLGVANDIGE 60

Query: 364  NVGLLPGIVCNKLPTWAMLSIGVVACFLGYGVLWLAISQTVQSLPYWLLWIALVVGTNSN 543
            NVGLLPG+VCNK P W +LSIG  ACFLGYGVLWLA+S+T+ SLP+WLLW AL V TNS+
Sbjct: 61   NVGLLPGVVCNKFPPWVVLSIGAFACFLGYGVLWLALSRTLLSLPFWLLWFALCVATNSS 120

Query: 544  AWFGTAVLVTNMRNFPFSRGIVAGILKGYVGLSAAVYTVIYXXXXXXXXXXXXXXXXXXX 723
            AW  T+VLVTNMRNFP SRG VAGILKGY GLSAAVYT IY                   
Sbjct: 121  AWLSTSVLVTNMRNFPLSRGTVAGILKGYGGLSAAVYTEIYTTTLHKSSSELLMFLALGV 180

Query: 724  XXXXXALMYFVRPCTPASGADSREHGHFVFTQVASIALGIYLLTTTVLFDSLSFSGTVSY 903
                  +MYF+RPCTPASG DS +HGHF+FTQ AS+ LG YLLTTT+L D  S S  +SY
Sbjct: 181  PLICFTMMYFIRPCTPASGEDSAQHGHFLFTQAASVVLGSYLLTTTILNDIFSLSAPISY 240

Query: 904  TFIAIMVLFLMAPLAIPVKMTFYRAS---------PQKSSDQLIPEEDNAENKEPLLIPS 1056
            TF+A MVL LMAPLAIP+KMT    +         P  SS+ ++  E+NA+  EPLL PS
Sbjct: 241  TFLAAMVLLLMAPLAIPIKMTLNPTNRSKSGMLNQPVGSSESMLQGEENADKTEPLLTPS 300

Query: 1057 SSSAQLGSFLDGDDTS 1104
            SS+A LGSF   D  S
Sbjct: 301  SSTASLGSFHKNDCVS 316


>ref|XP_002270754.1| PREDICTED: uncharacterized membrane protein YMR155W [Vitis vinifera]
            gi|297743570|emb|CBI36437.3| unnamed protein product
            [Vitis vinifera]
          Length = 564

 Score =  398 bits (1023), Expect = e-108
 Identities = 203/313 (64%), Positives = 235/313 (75%), Gaps = 6/313 (1%)
 Frame = +1

Query: 184  MAVLKAGSRPPWVGLGAAVWVQIAAGNAYNFPLYSHSLKSVLGFSQQQLTMLGVANDIGE 363
            M  LKAGSRPPWVGLGAAVWV+IAAGN YNFPLYS SLKSV+G++QQQLTMLGVANDIGE
Sbjct: 1    MPPLKAGSRPPWVGLGAAVWVEIAAGNGYNFPLYSPSLKSVMGYNQQQLTMLGVANDIGE 60

Query: 364  NVGLLPGIVCNKLPTWAMLSIGVVACFLGYGVLWLAISQTVQSLPYWLLWIALVVGTNSN 543
            NVG+LPGI  NKLP WA+L+IG  ACFLGYGVLWLA+SQTVQ+LPY +LW+ALV+ T+S 
Sbjct: 61   NVGILPGIASNKLPPWAVLAIGACACFLGYGVLWLAVSQTVQNLPYIVLWLALVIATHSC 120

Query: 544  AWFGTAVLVTNMRNFPFSRGIVAGILKGYVGLSAAVYTVIYXXXXXXXXXXXXXXXXXXX 723
            AW GTAVLVTNMRNFP SRG VAGILKGY+GLSAAVYT IY                   
Sbjct: 121  AWLGTAVLVTNMRNFPLSRGTVAGILKGYIGLSAAVYTEIYNSVLQESASKLLLFLTLGL 180

Query: 724  XXXXXALMYFVRPCTPASGADSREHGHFVFTQVASIALGIYLLTTTVLFDSLSFSGTVSY 903
                 ALMYF+R CTPASG DS EHGHF+FTQ AS+ LGIYLL TTV+ D  + S  +S 
Sbjct: 181  PVLCFALMYFIRACTPASGEDSSEHGHFLFTQAASVCLGIYLLATTVVDDLFNPSDALSN 240

Query: 904  TFIAIMVLFLMAPLAIPVKMTFYRASPQK------SSDQLIPEEDNAENKEPLLIPSSSS 1065
            TF  IMV+FL+ PLAIP+KMT + ++ +K      SSD L+  E N+   EPLL PSSS+
Sbjct: 241  TFTGIMVIFLLCPLAIPLKMTLFPSNSKKNLPPVGSSDSLVQGEGNSNQTEPLLTPSSSA 300

Query: 1066 AQLGSFLDGDDTS 1104
              LGSF +G+  S
Sbjct: 301  TCLGSFHEGEYAS 313


>ref|XP_002327403.1| predicted protein [Populus trichocarpa] gi|222835957|gb|EEE74378.1|
            predicted protein [Populus trichocarpa]
          Length = 564

 Score =  398 bits (1022), Expect = e-108
 Identities = 197/313 (62%), Positives = 233/313 (74%), Gaps = 5/313 (1%)
 Frame = +1

Query: 181  SMAVLKAGSRPPWVGLGAAVWVQIAAGNAYNFPLYSHSLKSVLGFSQQQLTMLGVANDIG 360
            S  V+K GSRPPWVGL AA+WV+IAAGNAYNFPLYS +LKSV+G +QQQLTMLGVANDIG
Sbjct: 2    SNLVVKGGSRPPWVGLAAALWVEIAAGNAYNFPLYSPALKSVMGLNQQQLTMLGVANDIG 61

Query: 361  ENVGLLPGIVCNKLPTWAMLSIGVVACFLGYGVLWLAISQTVQSLPYWLLWIALVVGTNS 540
            ENVGLLPG+ CNK P WA+LS+GV+ACFLGYGVLWL +SQTV+ LPYWLLW+ALV+ TNS
Sbjct: 62   ENVGLLPGMACNKFPPWAVLSVGVLACFLGYGVLWLVVSQTVKPLPYWLLWLALVIATNS 121

Query: 541  NAWFGTAVLVTNMRNFPFSRGIVAGILKGYVGLSAAVYTVIYXXXXXXXXXXXXXXXXXX 720
            NAWFGTAV+VTNMRNFP SRG V+GILKG  G+SAAVYTV+Y                  
Sbjct: 122  NAWFGTAVVVTNMRNFPLSRGTVSGILKGCAGISAAVYTVVYSLVLKGSASNLLLFLTLV 181

Query: 721  XXXXXXALMYFVRPCTPASGADSREHGHFVFTQVASIALGIYLLTTTVLFDSLSFSGTVS 900
                  A+MYF+RPCTPASG DS EH HF+FTQ A I L IYLL T ++   +S S  VS
Sbjct: 182  IPILCLAMMYFIRPCTPASGEDSSEHVHFLFTQAAVILLAIYLLITAIIGTVVSLSDAVS 241

Query: 901  YTFIAIMVLFLMAPLAIPVKMTFYRASPQK-----SSDQLIPEEDNAENKEPLLIPSSSS 1065
            Y  +AI+V+FL++PLAIPVKMT + + P+K     SSD L+  E      +PLL PSSS+
Sbjct: 242  YILVAIVVIFLISPLAIPVKMTIFPSRPKKNPPSDSSDHLMLGEGETTPTDPLLTPSSSA 301

Query: 1066 AQLGSFLDGDDTS 1104
              LGSF + DD S
Sbjct: 302  TSLGSFYENDDAS 314


>ref|XP_002298207.1| predicted protein [Populus trichocarpa] gi|222845465|gb|EEE83012.1|
            predicted protein [Populus trichocarpa]
          Length = 564

 Score =  397 bits (1021), Expect = e-108
 Identities = 195/309 (63%), Positives = 228/309 (73%), Gaps = 6/309 (1%)
 Frame = +1

Query: 190  VLKAGSRPPWVGLGAAVWVQIAAGNAYNFPLYSHSLKSVLGFSQQQLTMLGVANDIGENV 369
            VLKAGSRPPWVGL AAVWV IAAGN YNFPLYS SLKSVLG +QQQ+T+LGVANDIGEN+
Sbjct: 5    VLKAGSRPPWVGLAAAVWVLIAAGNGYNFPLYSPSLKSVLGLNQQQITILGVANDIGENI 64

Query: 370  GLLPGIVCNKLPTWAMLSIGVVACFLGYGVLWLAISQTVQSLPYWLLWIALVVGTNSNAW 549
            GLLPGI CNK P WA+LS+GVV CFLGYGVLWL ++QTV  LPYWL+W+ALVV TNS  W
Sbjct: 65   GLLPGIACNKFPPWALLSVGVVFCFLGYGVLWLTVTQTVIGLPYWLIWVALVVATNSTTW 124

Query: 550  FGTAVLVTNMRNFPFSRGIVAGILKGYVGLSAAVYTVIYXXXXXXXXXXXXXXXXXXXXX 729
            FGTAVLVTNMRNFP SRG V+GILKGY G++AAVYTVIY                     
Sbjct: 125  FGTAVLVTNMRNFPLSRGTVSGILKGYAGIAAAVYTVIYKLVLKESDSELLLILTLGIPI 184

Query: 730  XXXALMYFVRPCTPASGADSREHGHFVFTQVASIALGIYLLTTTVLFDSLSFSGTVSYTF 909
               A+MYF+RPC+PASG DS EH HF+F+QVAS+ L +YLL TT++   +S S TVSY  
Sbjct: 185  LCLAMMYFIRPCSPASGVDSSEHVHFIFSQVASVLLALYLLITTIISGVVSLSDTVSYIL 244

Query: 910  IAIMVLFLMAPLAIPVKMTFYRAS------PQKSSDQLIPEEDNAENKEPLLIPSSSSAQ 1071
            + IMV+ LM+PLAIPVKMT + A       P  SSD L+P+E  +   + LL PSSS   
Sbjct: 245  VLIMVIILMSPLAIPVKMTLFPAEHKRHVPPSDSSDHLVPKEGESTPTDSLLTPSSSGTN 304

Query: 1072 LGSFLDGDD 1098
            LGSF + +D
Sbjct: 305  LGSFYENED 313


>ref|XP_002530466.1| conserved hypothetical protein [Ricinus communis]
            gi|223530011|gb|EEF31936.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 510

 Score =  396 bits (1017), Expect = e-108
 Identities = 194/311 (62%), Positives = 233/311 (74%), Gaps = 6/311 (1%)
 Frame = +1

Query: 190  VLKAGSRPPWVGLGAAVWVQIAAGNAYNFPLYSHSLKSVLGFSQQQLTMLGVANDIGENV 369
            VLK GSRPPWVGL AA WVQ+ AGNAYNFPLYS +LKSVLG++QQQLT+LGVANDIGENV
Sbjct: 5    VLKPGSRPPWVGLAAAAWVQVCAGNAYNFPLYSTALKSVLGYNQQQLTILGVANDIGENV 64

Query: 370  GLLPGIVCNKLPTWAMLSIGVVACFLGYGVLWLAISQTVQSLPYWLLWIALVVGTNSNAW 549
            GL+PGIV NK P WA+L +GV++CFLGYGVLWLA+S+TV  LPYWLL++ALVVGTNSNAW
Sbjct: 65   GLIPGIVINKFPPWAVLLVGVLSCFLGYGVLWLAVSKTVTGLPYWLLFLALVVGTNSNAW 124

Query: 550  FGTAVLVTNMRNFPFSRGIVAGILKGYVGLSAAVYTVIYXXXXXXXXXXXXXXXXXXXXX 729
            FGTAVLVTNMRNFP SRG V+GILKGYVGLSA+VYT++Y                     
Sbjct: 125  FGTAVLVTNMRNFPLSRGTVSGILKGYVGLSASVYTLLYNMALDESASKLLLFLTVGIPV 184

Query: 730  XXXALMYFVRPCTPASGADSREHGHFVFTQVASIALGIYLLTTTVLFDSLSFSGTVSYTF 909
               A+MYF+R CTPASG DS EH HFVFTQ +++ L +YLL  T++ D +S S  VSY  
Sbjct: 185  ICLAMMYFIRACTPASGEDSSEHVHFVFTQASNVVLALYLLIATIISDVVSLSTVVSYIL 244

Query: 910  IAIMVLFLMAPLAIPVKMTFYRASPQ------KSSDQLIPEEDNAENKEPLLIPSSSSAQ 1071
            + +M++ L+APLAIP+KMT + A P+       SSD L+P E  +   +PLL PSSS+A 
Sbjct: 245  VGVMIIILLAPLAIPIKMTLFPARPRNGLPASNSSDNLVPREGESAPADPLLTPSSSAAY 304

Query: 1072 LGSFLDGDDTS 1104
            LGSF D D  S
Sbjct: 305  LGSFHDNDYAS 315


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