BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017160
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis v...   105   3e-21
emb|CBI24130.3| unnamed protein product [Vitis vinifera]              105   3e-21
ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communi...    90   2e-16
ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
gb|AAC17058.1| Contains similarity to Kinesin-like protein C gb|...    86   4e-15

>ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis vinifera]
          Length = 2087

 Score =  105 bits (263), Expect = 3e-21
 Identities = 55/110 (50%), Positives = 76/110 (69%)
 Frame = +3

Query: 54  MPLFITEEELERCSNNPTLISQKADAYIIQLHRQIETLKAQSDASSITXXXXXXXXXXXX 233
           MPLFI++EE  RCSN+  L+++KAD++I  L+ +++T+KAQ+DA+SIT            
Sbjct: 1   MPLFISDEEYSRCSNDVALVAEKADSFIRDLYNELQTVKAQADAASIT------------ 48

Query: 234 XXXXXXXXSEQTCALLEQKYISLSSDFSKLESQNSQLTLSIDHHLQDLAQ 383
                   +EQTC+LLEQKYISLS +FSKLESQN+QL  S+   L +LAQ
Sbjct: 49  --------AEQTCSLLEQKYISLSQEFSKLESQNAQLNSSLQERLSELAQ 90


>emb|CBI24130.3| unnamed protein product [Vitis vinifera]
          Length = 2088

 Score =  105 bits (263), Expect = 3e-21
 Identities = 55/110 (50%), Positives = 76/110 (69%)
 Frame = +3

Query: 54  MPLFITEEELERCSNNPTLISQKADAYIIQLHRQIETLKAQSDASSITXXXXXXXXXXXX 233
           MPLFI++EE  RCSN+  L+++KAD++I  L+ +++T+KAQ+DA+SIT            
Sbjct: 1   MPLFISDEEYSRCSNDVALVAEKADSFIRDLYNELQTVKAQADAASIT------------ 48

Query: 234 XXXXXXXXSEQTCALLEQKYISLSSDFSKLESQNSQLTLSIDHHLQDLAQ 383
                   +EQTC+LLEQKYISLS +FSKLESQN+QL  S+   L +LAQ
Sbjct: 49  --------AEQTCSLLEQKYISLSQEFSKLESQNAQLNSSLQERLSELAQ 90


>ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communis]
           gi|223541994|gb|EEF43539.1| Nucleoprotein TPR, putative
           [Ricinus communis]
          Length = 2095

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 50/110 (45%), Positives = 70/110 (63%)
 Frame = +3

Query: 54  MPLFITEEELERCSNNPTLISQKADAYIIQLHRQIETLKAQSDASSITXXXXXXXXXXXX 233
           MPLFI+++EL R S + + ++ KAD YI  L    ET+KA +DA++IT            
Sbjct: 1   MPLFISDDELARHSGDVSFVAAKADDYIKGLQADFETVKAAADAAAIT------------ 48

Query: 234 XXXXXXXXSEQTCALLEQKYISLSSDFSKLESQNSQLTLSIDHHLQDLAQ 383
                   +EQTC+LLEQK++SLSS+FS LESQN+QL  S+D  L +LA+
Sbjct: 49  --------AEQTCSLLEQKFLSLSSEFSNLESQNAQLQTSLDDRLSELAE 90


>ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|222852039|gb|EEE89586.1|
           predicted protein [Populus trichocarpa]
          Length = 2052

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 47/110 (42%), Positives = 72/110 (65%)
 Frame = +3

Query: 54  MPLFITEEELERCSNNPTLISQKADAYIIQLHRQIETLKAQSDASSITXXXXXXXXXXXX 233
           M +FIT+++L R SN+ + ++ KAD +I  L  ++E ++A +DA+SIT            
Sbjct: 1   MHIFITDDDLARHSNDASYVAAKADEFIRGLQSELENVRAAADAASIT------------ 48

Query: 234 XXXXXXXXSEQTCALLEQKYISLSSDFSKLESQNSQLTLSIDHHLQDLAQ 383
                   +EQTC+LLEQK+++LS++FSKLESQN+QL  S+D  L +LAQ
Sbjct: 49  --------AEQTCSLLEQKFLALSTEFSKLESQNAQLQSSLDDRLSELAQ 90


>gb|AAC17058.1| Contains similarity to Kinesin-like protein C gb|D21138 from A.
           thaliana [Arabidopsis thaliana]
          Length = 785

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 46/111 (41%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
 Frame = +3

Query: 54  MPLFITEEELERCSNNP-TLISQKADAYIIQLHRQIETLKAQSDASSITXXXXXXXXXXX 230
           MPLF+ +EEL R S++  ++++++AD YI +++ ++++++A++DA+SIT           
Sbjct: 1   MPLFMPDEELARLSSDAASVVAERADEYIRKIYAELDSVRAKADAASIT----------- 49

Query: 231 XXXXXXXXXSEQTCALLEQKYISLSSDFSKLESQNSQLTLSIDHHLQDLAQ 383
                    +EQTC+LLEQKY+SLS DFS LESQN++L    D  L +LAQ
Sbjct: 50  ---------AEQTCSLLEQKYLSLSQDFSSLESQNAKLQSDFDDRLAELAQ 91