BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017097
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532665.1| PREDICTED: DNA polymerase eta-like [Glycine ...   226   2e-57
ref|XP_002275643.2| PREDICTED: DNA polymerase eta [Vitis vinifera]    223   1e-56
ref|XP_003638302.1| DNA polymerase eta [Medicago truncatula] gi|...   223   1e-56
emb|CBI27227.3| unnamed protein product [Vitis vinifera]              223   1e-56
gb|AAC79146.1| similar to DNA-damage-inducible protein P [Arabid...   223   2e-56

>ref|XP_003532665.1| PREDICTED: DNA polymerase eta-like [Glycine max]
          Length = 703

 Score =  226 bits (576), Expect = 2e-57
 Identities = 109/132 (82%), Positives = 122/132 (92%)
 Frame = -2

Query: 398 GIAHNKMLAKLASSMNKPAQQTVVPFSAVTELLASLPIKKMKQLGGKLGSSVQTDLGVNS 219
           GIAHNKMLAKLAS+MNKPAQQTVVP S+V  LLASLPIKKMK LGGKLGSS+Q+DLGVN+
Sbjct: 210 GIAHNKMLAKLASAMNKPAQQTVVPQSSVEGLLASLPIKKMKHLGGKLGSSLQSDLGVNT 269

Query: 218 VGDLLQFSEDYLQERYGVNTGTWLWNTARGVNGDEVEGRLLPKSHGSGKTFPGPQALKTI 39
           VGDLLQFSE+ LQ+ YG+NTGTWLWN ARG++G+EVEGRLLPKSHGSGKTFPGPQALKT+
Sbjct: 270 VGDLLQFSEEKLQQWYGINTGTWLWNIARGISGEEVEGRLLPKSHGSGKTFPGPQALKTV 329

Query: 38  TSVECWLNNLCE 3
            SV+ WLN LCE
Sbjct: 330 DSVQHWLNQLCE 341


>ref|XP_002275643.2| PREDICTED: DNA polymerase eta [Vitis vinifera]
          Length = 779

 Score =  223 bits (568), Expect = 1e-56
 Identities = 108/132 (81%), Positives = 119/132 (90%)
 Frame = -2

Query: 398 GIAHNKMLAKLASSMNKPAQQTVVPFSAVTELLASLPIKKMKQLGGKLGSSVQTDLGVNS 219
           GIAHNKMLAKLAS+MNKPAQQT+VP S V  LL SLPIKKMKQLGGKLGSS+Q+DLGVN+
Sbjct: 209 GIAHNKMLAKLASAMNKPAQQTIVPLSCVRGLLGSLPIKKMKQLGGKLGSSLQSDLGVNT 268

Query: 218 VGDLLQFSEDYLQERYGVNTGTWLWNTARGVNGDEVEGRLLPKSHGSGKTFPGPQALKTI 39
           VGDLLQFSE+ LQE YG+NTGTWLWN ARG++G+EVE RLL KSHGSGKTFPGP+ALKTI
Sbjct: 269 VGDLLQFSEEKLQECYGINTGTWLWNIARGISGEEVESRLLSKSHGSGKTFPGPKALKTI 328

Query: 38  TSVECWLNNLCE 3
            SVE WLN LCE
Sbjct: 329 ASVENWLNELCE 340


>ref|XP_003638302.1| DNA polymerase eta [Medicago truncatula]
           gi|355504237|gb|AES85440.1| DNA polymerase eta [Medicago
           truncatula]
          Length = 543

 Score =  223 bits (568), Expect = 1e-56
 Identities = 107/132 (81%), Positives = 121/132 (91%)
 Frame = -2

Query: 398 GIAHNKMLAKLASSMNKPAQQTVVPFSAVTELLASLPIKKMKQLGGKLGSSVQTDLGVNS 219
           GIAHNKMLAKLAS+MNKPAQQTVVP S+V  LL S PIKKMKQLGGKLG+S+Q+DLG+N+
Sbjct: 210 GIAHNKMLAKLASAMNKPAQQTVVPHSSVEGLLESFPIKKMKQLGGKLGTSLQSDLGINT 269

Query: 218 VGDLLQFSEDYLQERYGVNTGTWLWNTARGVNGDEVEGRLLPKSHGSGKTFPGPQALKTI 39
           VGDLLQFSE+ LQ+RYG+NTGTWLWN ARG++G+EVEGRLLPKSHGSGKTFPGPQALKTI
Sbjct: 270 VGDLLQFSEEKLQQRYGINTGTWLWNIARGISGEEVEGRLLPKSHGSGKTFPGPQALKTI 329

Query: 38  TSVECWLNNLCE 3
            SV+ WLN L E
Sbjct: 330 ASVQHWLNELGE 341


>emb|CBI27227.3| unnamed protein product [Vitis vinifera]
          Length = 773

 Score =  223 bits (568), Expect = 1e-56
 Identities = 108/132 (81%), Positives = 119/132 (90%)
 Frame = -2

Query: 398 GIAHNKMLAKLASSMNKPAQQTVVPFSAVTELLASLPIKKMKQLGGKLGSSVQTDLGVNS 219
           GIAHNKMLAKLAS+MNKPAQQT+VP S V  LL SLPIKKMKQLGGKLGSS+Q+DLGVN+
Sbjct: 209 GIAHNKMLAKLASAMNKPAQQTIVPLSCVRGLLGSLPIKKMKQLGGKLGSSLQSDLGVNT 268

Query: 218 VGDLLQFSEDYLQERYGVNTGTWLWNTARGVNGDEVEGRLLPKSHGSGKTFPGPQALKTI 39
           VGDLLQFSE+ LQE YG+NTGTWLWN ARG++G+EVE RLL KSHGSGKTFPGP+ALKTI
Sbjct: 269 VGDLLQFSEEKLQECYGINTGTWLWNIARGISGEEVESRLLSKSHGSGKTFPGPKALKTI 328

Query: 38  TSVECWLNNLCE 3
            SVE WLN LCE
Sbjct: 329 ASVENWLNELCE 340


>gb|AAC79146.1| similar to DNA-damage-inducible protein P [Arabidopsis thaliana]
           gi|9758378|dbj|BAB08827.1| DNA-damage-inducible protein
           P [Arabidopsis thaliana]
          Length = 689

 Score =  223 bits (567), Expect = 2e-56
 Identities = 106/132 (80%), Positives = 123/132 (93%)
 Frame = -2

Query: 398 GIAHNKMLAKLASSMNKPAQQTVVPFSAVTELLASLPIKKMKQLGGKLGSSVQTDLGVNS 219
           GIAHNKMLAKLAS MNKPAQQTVVP++AV ELL+SLPIKKMKQLGGKLG+S+QTDLGV++
Sbjct: 222 GIAHNKMLAKLASGMNKPAQQTVVPYAAVQELLSSLPIKKMKQLGGKLGTSLQTDLGVDT 281

Query: 218 VGDLLQFSEDYLQERYGVNTGTWLWNTARGVNGDEVEGRLLPKSHGSGKTFPGPQALKTI 39
           VGDLLQFSE  LQE YGVNTGTWLWN ARG++G+EV+GRLLPKSHGSGKTFPGP+ALK++
Sbjct: 282 VGDLLQFSETKLQEHYGVNTGTWLWNIARGISGEEVQGRLLPKSHGSGKTFPGPRALKSL 341

Query: 38  TSVECWLNNLCE 3
           ++V+ WLN L E
Sbjct: 342 STVQHWLNQLSE 353