BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017007
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532938.1| nucleic acid binding protein, putative [Rici...    87   1e-15
ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g...    86   3e-15
dbj|BAJ88160.1| predicted protein [Hordeum vulgare subsp. vulgare]     83   2e-14
gb|ACG35732.1| nucleic acid binding protein [Zea mays]                 83   2e-14
ref|XP_004139764.1| PREDICTED: KH domain-containing protein At5g...    83   3e-14

>ref|XP_002532938.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223527289|gb|EEF29442.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 300

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/64 (65%), Positives = 53/64 (82%)
 Frame = +1

Query: 100 GGRYMPYSPSPSNTATQNLSAFRSTAAALVEQDNYLAELLAERQKISPFMPVLPISFRLL 279
           GGR+M YSPSPS   + +LS  RS ++ALVEQ+ YL+ELLAER K+SPFMPVLP ++RLL
Sbjct: 14  GGRFMAYSPSPSAPHSPHLSGLRSASSALVEQEKYLSELLAERHKLSPFMPVLPHTYRLL 73

Query: 280 NQEI 291
           +QEI
Sbjct: 74  SQEI 77


>ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g56140 isoform 1 [Vitis
           vinifera] gi|296089986|emb|CBI39805.3| unnamed protein
           product [Vitis vinifera]
          Length = 287

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 43/66 (65%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
 Frame = +1

Query: 97  SGGRYMPYSPSPSNTA-TQNLSAFRSTAAALVEQDNYLAELLAERQKISPFMPVLPISFR 273
           S GRYM YSPSPS    + +++  RS  +ALVEQ+ YL+ELLAER K+SPFMPVLP S+R
Sbjct: 2   SSGRYMAYSPSPSTAPHSPHIAGLRSATSALVEQEKYLSELLAERHKLSPFMPVLPHSYR 61

Query: 274 LLNQEI 291
           LLNQEI
Sbjct: 62  LLNQEI 67


>dbj|BAJ88160.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 287

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/71 (60%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
 Frame = +1

Query: 97  SGGRYMPYSPSPSNTA-TQNLSAFRSTAAALVEQDNYLAELLAERQKISPFMPVLPISFR 273
           S GRYM YSPSPS T  +  +S  R+++AA+ +Q+ YLAELLAER K++PF+PVLP S R
Sbjct: 2   SSGRYMAYSPSPSTTPHSPRISGLRASSAAVADQEKYLAELLAERHKLNPFVPVLPHSIR 61

Query: 274 LLNQEI-RIDT 303
           LLNQEI R+ T
Sbjct: 62  LLNQEILRVST 72


>gb|ACG35732.1| nucleic acid binding protein [Zea mays]
          Length = 286

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/71 (60%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
 Frame = +1

Query: 97  SGGRYMPYSPSPSNTA-TQNLSAFRSTAAALVEQDNYLAELLAERQKISPFMPVLPISFR 273
           S GRYM YSPSPS T  +  ++  R+ +AA+ EQ+ YLAELLAERQK+ PF+PV+P S R
Sbjct: 2   SSGRYMAYSPSPSTTPHSPRIAGLRAPSAAMAEQEKYLAELLAERQKLGPFVPVIPHSVR 61

Query: 274 LLNQEI-RIDT 303
           LLNQEI R+ T
Sbjct: 62  LLNQEILRVST 72


>ref|XP_004139764.1| PREDICTED: KH domain-containing protein At5g56140-like [Cucumis
           sativus] gi|449508337|ref|XP_004163285.1| PREDICTED: KH
           domain-containing protein At5g56140-like [Cucumis
           sativus]
          Length = 296

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/70 (61%), Positives = 54/70 (77%), Gaps = 4/70 (5%)
 Frame = +1

Query: 94  SSGGRYMPYSPSPSNTATQNLSAFRS----TAAALVEQDNYLAELLAERQKISPFMPVLP 261
           S+ G YM +SPSPS   + +L   RS    +AAA++EQ+ YL+ELLAERQK+SPFMPVLP
Sbjct: 4   SAAGMYMAFSPSPSAPHSPHLPGLRSPSSASAAAILEQEKYLSELLAERQKLSPFMPVLP 63

Query: 262 ISFRLLNQEI 291
            S+RLLNQEI
Sbjct: 64  NSYRLLNQEI 73