BLASTX nr result

ID: Coptis24_contig00017000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017000
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265763.2| PREDICTED: uncharacterized protein LOC100252...    65   6e-09
emb|CAN76156.1| hypothetical protein VITISV_041487 [Vitis vinifera]    65   6e-09
ref|XP_004171946.1| PREDICTED: uncharacterized protein LOC101230...    56   3e-06
ref|XP_004140990.1| PREDICTED: uncharacterized protein LOC101208...    56   3e-06

>ref|XP_002265763.2| PREDICTED: uncharacterized protein LOC100252823 [Vitis vinifera]
          Length = 1771

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 48/136 (35%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
 Frame = -2

Query: 411  GKFITKPKSRKNTAQPSTSGNGVLDRFPGTT---YPVFSSLETPETNEIGKANESELPAL 241
            G+  TK K ++ TAQ STSGNG + R    T   YP FS  +   TN+  K  E  L + 
Sbjct: 1546 GERKTKTKPKQKTAQISTSGNGFVGRNTEATPPLYPSFSGSDELITNDSNKKREVGLMSP 1605

Query: 240  SKICQDSTGKVDEFIDFEDLNLSYIGQVDLRSPGKHF-TPNAASS--DTDEVIVQECYTD 70
              + QDS  +V E +DF  L +  +  ++    G     P   SS  + DE  +Q+  + 
Sbjct: 1606 GNVPQDSFKEVKEPMDFPSLQIHELDSIEELGVGSDLGGPQDLSSWLNFDEDGLQDHDSM 1665

Query: 69   GLEVPTDDLSELDLFI 22
            GLE+P DDLS+L++ +
Sbjct: 1666 GLEIPMDDLSDLNMIL 1681


>emb|CAN76156.1| hypothetical protein VITISV_041487 [Vitis vinifera]
          Length = 1734

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 48/136 (35%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
 Frame = -2

Query: 411  GKFITKPKSRKNTAQPSTSGNGVLDRFPGTT---YPVFSSLETPETNEIGKANESELPAL 241
            G+  TK K ++ TAQ STSGNG + R    T   YP FS  +   TN+  K  E  L + 
Sbjct: 1599 GERKTKTKPKQKTAQISTSGNGFVGRNTEATPPLYPSFSGSDELITNDSNKKREVGLMSP 1658

Query: 240  SKICQDSTGKVDEFIDFEDLNLSYIGQVDLRSPGKHF-TPNAASS--DTDEVIVQECYTD 70
              + QDS  +V E +DF  L +  +  ++    G     P   SS  + DE  +Q+  + 
Sbjct: 1659 GNVPQDSFKEVKEPMDFPSLQIHELDSIEELGVGSDLGGPQDLSSWLNFDEDGLQDHDSM 1718

Query: 69   GLEVPTDDLSELDLFI 22
            GLE+P DDLS+L++ +
Sbjct: 1719 GLEIPMDDLSDLNMIL 1734


>ref|XP_004171946.1| PREDICTED: uncharacterized protein LOC101230843, partial [Cucumis
            sativus]
          Length = 943

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
 Frame = -2

Query: 504  RNERMKDQHKDMSTTKSVVKVKNCFPPRDCNGKFITKPKSRKNTAQPSTSGNGVLDRFPG 325
            R+ER +D  KDMS    V K        D   +   K K ++ TAQ S +GN ++     
Sbjct: 782  RSERERD--KDMSARLCVTKAGRS-SAGDFRAERKAKTKPKQKTAQLSPAGNRLVGNLTD 838

Query: 324  TTYPVFSSLETPETNEIGKANESE----LPALSKICQDSTGKVDEFIDFEDLNLSYIGQV 157
             TY    +  +  +NEIG  N  +    L  L+   +DS+ ++ E  DF +L L  +  +
Sbjct: 839  GTYS--DNPGSRVSNEIGNGNIKKEFTVLLPLTNATEDSSKEIGECTDFTNLQLHDLDSI 896

Query: 156  DLRSPGKHFTPNAASS--DTDEVIVQECYTDGLEVPTDDLSELDLFI 22
            +L    +   P    S  + DE  +Q+    GL++P DDLSEL++ +
Sbjct: 897  ELGVGNELGGPQDLDSWLNIDEDGLQDHDAVGLDIPMDDLSELNMLL 943


>ref|XP_004140990.1| PREDICTED: uncharacterized protein LOC101208951 [Cucumis sativus]
          Length = 1346

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
 Frame = -2

Query: 504  RNERMKDQHKDMSTTKSVVKVKNCFPPRDCNGKFITKPKSRKNTAQPSTSGNGVLDRFPG 325
            R+ER +D  KDMS    V K        D   +   K K ++ TAQ S +GN ++     
Sbjct: 1185 RSERERD--KDMSARLCVTKAGRS-SAGDFRAERKAKTKPKQKTAQLSPAGNRLVGNLTD 1241

Query: 324  TTYPVFSSLETPETNEIGKANESE----LPALSKICQDSTGKVDEFIDFEDLNLSYIGQV 157
             TY    +  +  +NEIG  N  +    L  L+   +DS+ ++ E  DF +L L  +  +
Sbjct: 1242 GTYS--DNPGSRVSNEIGNGNIKKEFTVLLPLTNATEDSSKEIGECTDFTNLQLHDLDSI 1299

Query: 156  DLRSPGKHFTPNAASS--DTDEVIVQECYTDGLEVPTDDLSELDLFI 22
            +L    +   P    S  + DE  +Q+    GL++P DDLSEL++ +
Sbjct: 1300 ELGVGNELGGPQDLDSWLNIDEDGLQDHDAVGLDIPMDDLSELNMLL 1346


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