BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016998
         (1381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263067.2| PREDICTED: ADP-ribosylation factor GTPase-ac...   492   e-137
ref|XP_003546262.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   485   e-134
gb|ADQ00629.1| ARF-GAP protein [Phytolacca acinosa]                   483   e-134
ref|XP_003535088.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   478   e-132
ref|XP_004134589.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   477   e-132

>ref|XP_002263067.2| PREDICTED: ADP-ribosylation factor GTPase-activating protein
            AGD12-like [Vitis vinifera] gi|297740835|emb|CBI31017.3|
            unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  492 bits (1267), Expect = e-137
 Identities = 243/332 (73%), Positives = 282/332 (84%), Gaps = 3/332 (0%)
 Frame = -3

Query: 1274 MSKQRFDSAKSSSGSLKRLKELLLQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRS 1095
            MS + ++  + +SG  +RLK+LLL+SDNR CADCGAPDPKWASANIGVFICLKCCGVHRS
Sbjct: 1    MSDRPYELGRPASGK-RRLKDLLLKSDNRTCADCGAPDPKWASANIGVFICLKCCGVHRS 59

Query: 1094 LGTHISKVLSVTLDDWSDDEIDSMVEVGGNSSANSIYEAFVPEGFLKPRPESSHEDRMKF 915
            LGTHISKVLSV LDDWSDDEID+MVEVGGNSSANSIYEAF+PEG  KP+P SSHE+RM+F
Sbjct: 60   LGTHISKVLSVALDDWSDDEIDAMVEVGGNSSANSIYEAFIPEGVTKPKPNSSHEERMRF 119

Query: 914  IRSKYELQEFLKPXXXXXXXXXXXXXXXXXXXL---DSFRSSDSSKKMEGMVEFIGLLKV 744
            IRSKYELQEFLKP                       D+FRSS+S +K+EGMVE+IGLLKV
Sbjct: 120  IRSKYELQEFLKPSLRIASVSSGKSSLQSSFSRKLMDNFRSSNS-QKLEGMVEYIGLLKV 178

Query: 743  KVVKGTNLAVRDMLSSDPYVILTLGQQKVQTQVIRSNLNPTWNEELMLSVPQCYGALKLQ 564
            KV++G NLAVRDMLSSDPYV+LTLG Q VQTQVI SNLNP WNEELMLSVP  YG +K++
Sbjct: 179  KVIRGKNLAVRDMLSSDPYVVLTLGPQTVQTQVITSNLNPVWNEELMLSVPMDYGPIKVK 238

Query: 563  VYDHDTFSADDIMGEAEVDLQPLITAAVAFGDAGMFGNIQIGKWLKSHDNALIRDSIINI 384
            V+DHDTFSADDIMGEAE+D+QPLIT+A+AFG+A MFG++QIGKWLKSHDNAL+ DSIINI
Sbjct: 239  VFDHDTFSADDIMGEAEIDIQPLITSAMAFGNAEMFGDMQIGKWLKSHDNALLEDSIINI 298

Query: 383  VDGKVKQEISLKLQKVECGEVDLEVEWMPLEQ 288
            + GKVKQE+ LKLQ VE GE+DLE+EW+PL+Q
Sbjct: 299  IGGKVKQEVQLKLQNVESGELDLEIEWLPLDQ 330


>ref|XP_003546262.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein
            AGD12-like [Glycine max]
          Length = 324

 Score =  485 bits (1249), Expect = e-134
 Identities = 235/318 (73%), Positives = 274/318 (86%), Gaps = 1/318 (0%)
 Frame = -3

Query: 1238 SGSLKRLKELLLQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVT 1059
            + S ++LK+LLLQSDNR+CADC APDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVT
Sbjct: 7    ASSRRKLKDLLLQSDNRLCADCNAPDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVT 66

Query: 1058 LDDWSDDEIDSMVEVGGNSSANSIYEAFVPEGFLKPRPESSHEDRMKFIRSKYELQEFLK 879
            LDDWS+DEID+M+EVGGN+SANSIYEA++PEG+ KP P++ HE R KFIRSKYELQEFLK
Sbjct: 67   LDDWSEDEIDAMMEVGGNASANSIYEAYIPEGYTKPGPDAGHEQRSKFIRSKYELQEFLK 126

Query: 878  PXXXXXXXXXXXXXXXXXXXL-DSFRSSDSSKKMEGMVEFIGLLKVKVVKGTNLAVRDML 702
            P                     DSF+S+ SS++MEGMVEFIG+LKVKV+KGTNLA+RD+ 
Sbjct: 127  PSLRIVSGKSSLQSSSAKSSFMDSFKSTGSSQRMEGMVEFIGMLKVKVIKGTNLAIRDIK 186

Query: 701  SSDPYVILTLGQQKVQTQVIRSNLNPTWNEELMLSVPQCYGALKLQVYDHDTFSADDIMG 522
            SSDPYV+L+LGQQ VQT +IRSNLNP WNEE MLSVP+ YG +KL+V+DHDTFSADDIMG
Sbjct: 187  SSDPYVVLSLGQQTVQTTIIRSNLNPVWNEEYMLSVPEHYGQMKLKVFDHDTFSADDIMG 246

Query: 521  EAEVDLQPLITAAVAFGDAGMFGNIQIGKWLKSHDNALIRDSIINIVDGKVKQEISLKLQ 342
            EA++DLQ LIT+A+AFGDAGMFGN+QIGKWLKS DNALI DS +NIVDGKVKQ +SLKLQ
Sbjct: 247  EADIDLQSLITSAMAFGDAGMFGNMQIGKWLKSDDNALIEDSTVNIVDGKVKQMMSLKLQ 306

Query: 341  KVECGEVDLEVEWMPLEQ 288
             VE GE+DLE+EW+PLEQ
Sbjct: 307  DVESGELDLELEWIPLEQ 324


>gb|ADQ00629.1| ARF-GAP protein [Phytolacca acinosa]
          Length = 332

 Score =  483 bits (1242), Expect = e-134
 Identities = 240/330 (72%), Positives = 281/330 (85%), Gaps = 5/330 (1%)
 Frame = -3

Query: 1262 RFDSAKSSSGSLKRLKELLLQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGTH 1083
            R +  + +SG  +RLK+LLLQ DNR CADCGAPDPKWASANIGVFICLKCCGVHRSLGTH
Sbjct: 4    RMELGRPTSGK-RRLKDLLLQKDNRFCADCGAPDPKWASANIGVFICLKCCGVHRSLGTH 62

Query: 1082 ISKVLSVTLDDWSDDEIDSMVEVGGNSSANSIYEAFVPEGFLKPRPESSHEDRMKFIRSK 903
            ISKVLSVTLD+WSD++ID+MVEVGGN++AN+IYEAF+PEG  KP P++SH+DRM+FIRSK
Sbjct: 63   ISKVLSVTLDEWSDEDIDAMVEVGGNAAANAIYEAFIPEGRSKPGPDASHDDRMRFIRSK 122

Query: 902  YELQEFLKPXXXXXXXXXXXXXXXXXXXL--DSFRSSDSSKKME---GMVEFIGLLKVKV 738
            YELQEFLKP                      +SFRSS+SSKK E   GMVEFIG+LKVKV
Sbjct: 123  YELQEFLKPSLRIVSMSDKSSLQASFSKKLVNSFRSSNSSKKSENSEGMVEFIGVLKVKV 182

Query: 737  VKGTNLAVRDMLSSDPYVILTLGQQKVQTQVIRSNLNPTWNEELMLSVPQCYGALKLQVY 558
            VKGTNLAVRDMLSSDPYV+L LGQQ VQT V+RSNLNP WNEELMLSVPQ YG +K++V+
Sbjct: 183  VKGTNLAVRDMLSSDPYVVLNLGQQTVQTSVVRSNLNPVWNEELMLSVPQRYGPVKVKVF 242

Query: 557  DHDTFSADDIMGEAEVDLQPLITAAVAFGDAGMFGNIQIGKWLKSHDNALIRDSIINIVD 378
            D+DTFSADDIMGEAE+D+QPLIT+A+A+GD GMFG++QIGKWLKS DNALI DSIINIV+
Sbjct: 243  DYDTFSADDIMGEAELDIQPLITSAMAYGDPGMFGDMQIGKWLKSQDNALIEDSIINIVN 302

Query: 377  GKVKQEISLKLQKVECGEVDLEVEWMPLEQ 288
            GKVKQE+ LKLQ VE G++++EVEW+PLEQ
Sbjct: 303  GKVKQEMQLKLQNVESGDLEIEVEWVPLEQ 332


>ref|XP_003535088.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein
            AGD12-like [Glycine max]
          Length = 324

 Score =  478 bits (1230), Expect = e-132
 Identities = 232/318 (72%), Positives = 271/318 (85%), Gaps = 1/318 (0%)
 Frame = -3

Query: 1238 SGSLKRLKELLLQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVT 1059
            + S ++LK+LL QS NR+CADC APDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVT
Sbjct: 7    ASSRRKLKDLLHQSGNRLCADCNAPDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVT 66

Query: 1058 LDDWSDDEIDSMVEVGGNSSANSIYEAFVPEGFLKPRPESSHEDRMKFIRSKYELQEFLK 879
            LDDWS+DEID+M+EVGGN SANSIYEA++PEG+ KP P++ HE R KFIRSKYELQEFLK
Sbjct: 67   LDDWSEDEIDAMIEVGGNVSANSIYEAYIPEGYTKPGPDAGHEQRSKFIRSKYELQEFLK 126

Query: 878  PXXXXXXXXXXXXXXXXXXXL-DSFRSSDSSKKMEGMVEFIGLLKVKVVKGTNLAVRDML 702
            P                     DSF+S+ SS++MEGMVEFIG+LKVKV+KGTNLA+RD+ 
Sbjct: 127  PSLRIVSGKSSLQSSSAKSSFMDSFKSTSSSQRMEGMVEFIGMLKVKVIKGTNLAIRDIK 186

Query: 701  SSDPYVILTLGQQKVQTQVIRSNLNPTWNEELMLSVPQCYGALKLQVYDHDTFSADDIMG 522
            SSDPYV+L+LGQQ VQT +IRSNLNP WNEE MLSVP+ YG +KL+V+DHDTFSADDIMG
Sbjct: 187  SSDPYVVLSLGQQTVQTTIIRSNLNPVWNEEYMLSVPEHYGQIKLKVFDHDTFSADDIMG 246

Query: 521  EAEVDLQPLITAAVAFGDAGMFGNIQIGKWLKSHDNALIRDSIINIVDGKVKQEISLKLQ 342
            EA++DLQ LIT+A+AFGDAGMFG++QIGKWLKS DNALI DS +NIVDGKVKQ +SLKLQ
Sbjct: 247  EADIDLQSLITSAMAFGDAGMFGDMQIGKWLKSDDNALIEDSTVNIVDGKVKQMMSLKLQ 306

Query: 341  KVECGEVDLEVEWMPLEQ 288
             VE GE+DLE+EW+PLEQ
Sbjct: 307  DVESGELDLELEWIPLEQ 324


>ref|XP_004134589.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein
            AGD12-like [Cucumis sativus]
            gi|449511123|ref|XP_004163868.1| PREDICTED:
            ADP-ribosylation factor GTPase-activating protein
            AGD12-like [Cucumis sativus]
          Length = 333

 Score =  477 bits (1227), Expect = e-132
 Identities = 236/334 (70%), Positives = 276/334 (82%), Gaps = 5/334 (1%)
 Frame = -3

Query: 1274 MSKQRFDSAKSSSGSLKRLKELLLQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRS 1095
            M+ +  +  +  SG  +RLK+LLL  DNR CADC A DPKWASANIGVFICLKCCGVHRS
Sbjct: 1    MNNRAMELGRPGSGK-RRLKDLLLLKDNRFCADCRAADPKWASANIGVFICLKCCGVHRS 59

Query: 1094 LGTHISKVLSVTLDDWSDDEIDSMVEVGGNSSANSIYEAFVPEGFLKPRPESSHEDRMKF 915
            LG+HISKVLSVTLD+W+DDEID+M+EVGGNSSAN+IYEAF+PEGF KP P+++HE R KF
Sbjct: 60   LGSHISKVLSVTLDEWNDDEIDAMIEVGGNSSANAIYEAFLPEGFSKPGPDATHEQRSKF 119

Query: 914  IRSKYELQEFLKPXXXXXXXXXXXXXXXXXXXL---DSFRSSDSSKKM--EGMVEFIGLL 750
            IRSKYELQEFLKP                       +SFRS+ S K    +GMVE+IGLL
Sbjct: 120  IRSKYELQEFLKPSLRILSSNSDKSNIQASFSSKIMNSFRSNSSQKSQSQQGMVEYIGLL 179

Query: 749  KVKVVKGTNLAVRDMLSSDPYVILTLGQQKVQTQVIRSNLNPTWNEELMLSVPQCYGALK 570
            KVKV+KGTNLA+RDM+SSDPYV++TLG+Q VQT V+RSNLNP WNEEL LSVPQ +G++K
Sbjct: 180  KVKVIKGTNLAIRDMMSSDPYVVMTLGKQTVQTSVVRSNLNPVWNEELTLSVPQGFGSIK 239

Query: 569  LQVYDHDTFSADDIMGEAEVDLQPLITAAVAFGDAGMFGNIQIGKWLKSHDNALIRDSII 390
            L+VYD+DTFSADDIMGEAE+DLQPLIT+A+AFGDAGMF N+QIGKWLKSHDNALI DS +
Sbjct: 240  LEVYDYDTFSADDIMGEAEIDLQPLITSAMAFGDAGMFSNMQIGKWLKSHDNALINDSTV 299

Query: 389  NIVDGKVKQEISLKLQKVECGEVDLEVEWMPLEQ 288
            NIVDGKVKQEI+LKLQ VE GE+DLE+EWM LEQ
Sbjct: 300  NIVDGKVKQEIALKLQNVESGELDLELEWMALEQ 333