BLASTX nr result

ID: Coptis24_contig00016996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016996
         (1351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30819.3| unnamed protein product [Vitis vinifera]              142   2e-31
ref|XP_002271969.2| PREDICTED: uncharacterized protein LOC100245...   139   2e-30
ref|XP_002331867.1| predicted protein [Populus trichocarpa] gi|2...   135   2e-29
ref|XP_002317304.1| predicted protein [Populus trichocarpa] gi|2...   133   9e-29
ref|XP_004162612.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   131   5e-28

>emb|CBI30819.3| unnamed protein product [Vitis vinifera]
          Length = 799

 Score =  142 bits (359), Expect = 2e-31
 Identities = 101/300 (33%), Positives = 141/300 (47%), Gaps = 29/300 (9%)
 Frame = +1

Query: 124  SGLQQAYANXXXXXXXXXXXXXXRDSE--YSSVNMVPTRDRIPRNAIPSINSPAISMQER 297
            S + QAY N              R+S+  YS   +  +      NA+ SI+   IS+ E 
Sbjct: 490  SSVMQAYTNSLPSNLLASTVPPARESDLPYSPFPITQSMSTKYSNAVSSISGSTISVTEA 549

Query: 298  VHPGVFAQSELNPQ-------------------------PNLSSGKLAEMVDNPFSPQRN 402
            +  G F+  +  PQ                         P L  G  A M+  PF PQ  
Sbjct: 550  LKTGSFSTPQPTPQTLPSTSVATGPALPQHLPPVHPYSQPGLPLGHFANMIGYPFLPQSY 609

Query: 403  SYMSSAFQKRSMGNSHTYQSPTVAHDTGIEHLLSQLRNSGSTXXXXXXXXXXXXXXXXXX 582
            +YM SA+Q+   GNS  +QS        +  +L Q +NS S                   
Sbjct: 610  TYMPSAYQQAFAGNSTYHQS--------LAAVLPQYKNSVSVSSLPQSAAIASGYGAFGS 661

Query: 583  XADVPGSFRQYLPSSPASSTIDHYDLI-SQYRDNNNFVS-PSQNEQSARWAGGPGSRTMP 756
               +PG+F    P++ A +TI + D+I SQY+D N+ +S   QNE SA W  GPGSRTM 
Sbjct: 662  STSIPGNFSLNPPTAAAGTTIGYDDVINSQYKDGNHLISLQQQNENSAMWVHGPGSRTMS 721

Query: 757  SLSPGQYYNFQGQNSQFGWDVQQGRKYSQAYGARGYPSPHHSQMGASREHLEQILRDRTL 936
            ++    YY+FQGQN Q G   +QG++ SQ +GA GYP+ +HSQ G S EH +Q  RD +L
Sbjct: 722  AVPANTYYSFQGQNQQPG-GFRQGQQPSQHFGALGYPNFYHSQAGISLEHQQQNPRDGSL 780


>ref|XP_002271969.2| PREDICTED: uncharacterized protein LOC100245196 [Vitis vinifera]
          Length = 866

 Score =  139 bits (349), Expect = 2e-30
 Identities = 95/274 (34%), Positives = 132/274 (48%), Gaps = 27/274 (9%)
 Frame = +1

Query: 196  DSEYSSVNMVPTRDRIPRNAIPSINSPAISMQERVHPGVFAQSELNPQ------------ 339
            D  YS   +  +      NA+ SI+   IS+ E +  G F+  +  PQ            
Sbjct: 583  DLPYSPFPITQSMSTKYSNAVSSISGSTISVTEALKTGSFSTPQPTPQTLPSTSVATGPA 642

Query: 340  -------------PNLSSGKLAEMVDNPFSPQRNSYMSSAFQKRSMGNSHTYQSPTVAHD 480
                         P L  G  A M+  PF PQ  +YM SA+Q+   GNS  +QS      
Sbjct: 643  LPQHLPPVHPYSQPGLPLGHFANMIGYPFLPQSYTYMPSAYQQAFAGNSTYHQS------ 696

Query: 481  TGIEHLLSQLRNSGSTXXXXXXXXXXXXXXXXXXXADVPGSFRQYLPSSPASSTIDHYDL 660
              +  +L Q +NS S                      +PG+F    P++ A +TI + D+
Sbjct: 697  --LAAVLPQYKNSVSVSSLPQSAAIASGYGAFGSSTSIPGNFSLNPPTAAAGTTIGYDDV 754

Query: 661  I-SQYRDNNNFVS-PSQNEQSARWAGGPGSRTMPSLSPGQYYNFQGQNSQFGWDVQQGRK 834
            I SQY+D N+ +S   QNE SA W  GPGSRTM ++    YY+FQGQN Q G   +QG++
Sbjct: 755  INSQYKDGNHLISLQQQNENSAMWVHGPGSRTMSAVPANTYYSFQGQNQQPG-GFRQGQQ 813

Query: 835  YSQAYGARGYPSPHHSQMGASREHLEQILRDRTL 936
             SQ +GA GYP+ +HSQ G S EH +Q  RD +L
Sbjct: 814  PSQHFGALGYPNFYHSQAGISLEHQQQNPRDGSL 847


>ref|XP_002331867.1| predicted protein [Populus trichocarpa] gi|222875385|gb|EEF12516.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  135 bits (341), Expect = 2e-29
 Identities = 90/255 (35%), Positives = 126/255 (49%), Gaps = 25/255 (9%)
 Frame = +1

Query: 250 NAIPSINSPAISMQERVHPGVFAQSELNPQ------------------------PNLSSG 357
           +A  SI+ P ISM E +  G  +  +  PQ                        P L  G
Sbjct: 51  SAASSISGPGISMSEALRAGGVSTPQPTPQTHPGANVATGPALPQHLAMHSYSQPTLPLG 110

Query: 358 KLAEMVDNPFSPQRNSYMSSAFQKRSMGNSHTYQSPTVAHDTGIEHLLSQLRNSGSTXXX 537
             A M+  PF  Q  +YM SA+Q+   GN+  +QS        +  +L Q +NS S    
Sbjct: 111 HFANMISYPFLAQSYTYMPSAYQQTFSGNNTYHQS--------LAAVLPQYKNSVSVSSL 162

Query: 538 XXXXXXXXXXXXXXXXADVPGSFRQYLPSSPASSTIDHYDLIS-QYRDNNNFVSPSQNEQ 714
                           +   G+F    P++PA +TI + D++S QY+D ++ +S  QNE 
Sbjct: 163 PQSAAVPSGYGYGSSTSIPTGNFPLNAPAAPAGTTIGYDDVLSSQYKDASHLISLQQNEN 222

Query: 715 SARWAGGPGSRTMPSLSPGQYYNFQGQNSQFGWDVQQGRKYSQAYGARGYPSPHHSQMGA 894
           SA W  GPGSRTM ++    YYNFQGQN Q G   +QG++ SQ +GA GYP+ +HSQ G 
Sbjct: 223 SAMWMHGPGSRTMSAVPASTYYNFQGQNQQPG-VFRQGQQPSQHFGAPGYPNYYHSQSGM 281

Query: 895 SREHLEQILRDRTLG 939
           S EH +Q  RD +LG
Sbjct: 282 SLEHQQQNTRDGSLG 296


>ref|XP_002317304.1| predicted protein [Populus trichocarpa] gi|222860369|gb|EEE97916.1|
            predicted protein [Populus trichocarpa]
          Length = 911

 Score =  133 bits (335), Expect = 9e-29
 Identities = 91/256 (35%), Positives = 127/256 (49%), Gaps = 26/256 (10%)
 Frame = +1

Query: 250  NAIPSINSPAISMQERVHPGVFAQSELNPQ------------------------PNLSSG 357
            NA  SI+ P+ISM E +  G  +  +  PQ                        P L  G
Sbjct: 647  NAATSISGPSISMSEALRAGGVSTPQPTPQTLPGANIATGPALPQHLAVHPYQQPTLPLG 706

Query: 358  KLAEMVDNPFSPQRNSYMSSAFQKRSMGNSHTYQSPTVAHDTGIEHLLSQLRNSGSTXXX 537
              A M+  PF  Q  +YM SAFQ+   GN+  +QS        +  +L Q +NS S    
Sbjct: 707  HFANMISYPFMAQSYTYMPSAFQQTFAGNNSYHQS--------LAAVLPQYKNSVSVSSL 758

Query: 538  XXXXXXXXXXXXXXXXADVPGSFRQYLPSSPASSTIDHYDLI-SQYRDNNNFVSPSQNEQ 714
                            +   G+F    P++PA +TI + D++ SQY+D ++ +S  QNE 
Sbjct: 759  PQSAAVASGYGFGSSTSIPAGNFPLNAPTAPAGTTIGYDDILGSQYKDASHLMSLQQNEN 818

Query: 715  SARWAGGPGSRTMPSLSPGQYYNFQGQNSQFGWDVQQGRKYSQAYGARGYPSPHHSQMGA 894
            SA W  GPGSRTM ++    YY+FQGQN Q G   +QG++ SQ +GA GYP+ +HSQ G 
Sbjct: 819  SAMWLHGPGSRTMSAVPASTYYSFQGQNQQPG-GFRQGQQPSQHFGALGYPNYYHSQTGM 877

Query: 895  SREH-LEQILRDRTLG 939
            S EH  +Q  RD +LG
Sbjct: 878  SLEHQQQQNSRDGSLG 893


>ref|XP_004162612.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101224560
            [Cucumis sativus]
          Length = 844

 Score =  131 bits (329), Expect = 5e-28
 Identities = 93/283 (32%), Positives = 133/283 (46%), Gaps = 23/283 (8%)
 Frame = +1

Query: 196  DSEYSSVNMVPTRDRIPR--NAIPSINSPAISMQERVHPGVFAQSELNPQPNLSSGK--- 360
            D +YS     P    +P+  NA  SI  P++SM E +       S+  PQ N+++G    
Sbjct: 568  DPQYSPF---PDTQSVPKYSNAASSITGPSMSMPEVLRTSSITTSQPTPQSNVAAGPAVP 624

Query: 361  -----------------LAEMVDNPFSPQRNSYMSSAFQKRSMGNSHTYQSPTVAHDTGI 489
                              A M+  PF PQ  +YM S FQ+   GNS  +Q+        +
Sbjct: 625  QHLAVHPYSQPTLPLGHFANMIGYPFLPQSYTYMPSGFQQAFAGNSTYHQA--------L 676

Query: 490  EHLLSQLRNSGSTXXXXXXXXXXXXXXXXXXXADVPGSFRQYLPSSPASSTIDHYDLIS- 666
              +L Q +NS S                    +   G+F    P++PA S+I + D IS 
Sbjct: 677  AAVLPQYKNSISVSSLPQSAAIASGYGFGSSTSIPGGNFPLNPPTAPAGSSIGYEDAISS 736

Query: 667  QYRDNNNFVSPSQNEQSARWAGGPGSRTMPSLSPGQYYNFQGQNSQFGWDVQQGRKYSQA 846
            QY+D+N+ +S  QN+  A W  GPGSRTM ++    YY  QGQN Q     +Q ++ SQ 
Sbjct: 737  QYKDSNHLLSLQQNDNPAMWIHGPGSRTMSAVPASAYYGLQGQNQQSS-GFRQAQQPSQQ 795

Query: 847  YGARGYPSPHHSQMGASREHLEQILRDRTLGNVLDYQDLRHSQ 975
            YGA GYP+ +HSQ G S +  +Q LRD +LG     Q  +  Q
Sbjct: 796  YGALGYPNFYHSQAGISLDGQQQTLRDASLGGSQGQQPKQSQQ 838


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