BLASTX nr result

ID: Coptis24_contig00016994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016994
         (1344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312017.1| predicted protein [Populus trichocarpa] gi|2...   174   4e-41
ref|XP_003535531.1| PREDICTED: endoplasmic reticulum metallopept...   168   3e-39
ref|XP_003591902.1| Endoplasmic reticulum metallopeptidase [Medi...   168   3e-39
ref|XP_002274159.1| PREDICTED: endoplasmic reticulum metallopept...   164   5e-38
emb|CAN83785.1| hypothetical protein VITISV_008228 [Vitis vinifera]   164   5e-38

>ref|XP_002312017.1| predicted protein [Populus trichocarpa] gi|222851837|gb|EEE89384.1|
            predicted protein [Populus trichocarpa]
          Length = 298

 Score =  174 bits (442), Expect = 4e-41
 Identities = 107/230 (46%), Positives = 135/230 (58%), Gaps = 12/230 (5%)
 Frame = +3

Query: 573  MHVVEATGGSGENQTPISYISLFSFTPGKLIEEVEHVKEEGFVCGNTKVIDFVTFEVKYG 752
            +HVV+A+G  GE Q P+SYISLFS TPGKL +EVE +KE GF CG  KV+DFVTF V YG
Sbjct: 76   VHVVDASGRYGEKQDPLSYISLFSNTPGKLEKEVEQIKE-GFTCGKDKVVDFVTFSVNYG 134

Query: 753  CISSNDAKSGWDESDIPNCMLKVM*RKVTG*PKF*LIQKFLHAGCLLLIW-IKLKTLSLK 929
            C + +D +SGW ESDIP   +        G  +   I + L      + W + + T  ++
Sbjct: 135  CWTHDDTESGWSESDIPTLHVD---SDTKGGER---ITRVLIDTKSSVRWSLAINTKEIE 188

Query: 930  E-ILRSSFQLVIR*G----VDGWHIIQFSGGKAAPKKFNLTLFWMTTTELEGSK------ 1076
            + IL+ + + +I  G    VDGWH IQFSGGK +P+KF LTLFW   T            
Sbjct: 189  DFILKGNSEELIPYGNKTSVDGWHHIQFSGGKESPRKFELTLFWSVKTMPSADNVDRTVI 248

Query: 1077 QALNXXXXXXXXXXXXXXKAERVLQKLPPWCTVFGKSTSPHTLAFLTSLP 1226
            Q                 KAERVL KLP WC++FGKSTSP TLAFL+SLP
Sbjct: 249  QDQRPLLKLRTDVNRLTPKAERVLAKLPTWCSLFGKSTSPLTLAFLSSLP 298


>ref|XP_003535531.1| PREDICTED: endoplasmic reticulum metallopeptidase 1-like [Glycine
            max]
          Length = 912

 Score =  168 bits (426), Expect = 3e-39
 Identities = 104/225 (46%), Positives = 133/225 (59%), Gaps = 4/225 (1%)
 Frame = +3

Query: 573  MHVVEATGGSGENQTPISYISLFSFTPGKLIEEVEHVKEEGFVCGNTKVIDFVTFEVKYG 752
            +HVV+ATG   + Q PISY+SLFS TPG L +EV+ + +EGFVCG  K +DFVTF VKYG
Sbjct: 695  VHVVDATGKLDQGQNPISYVSLFSNTPGNLNKEVKQI-DEGFVCGRDKTVDFVTFSVKYG 753

Query: 753  CISSNDAKSGWDESDIPNCMLKVM*RKVTG*PKF*LIQKFLHAGCLLLIWI-KLKTLSLK 929
            C + ND  + W E DIP  M  V   K  G      I        +L I I +++    K
Sbjct: 754  CWTYNDTTNDWTEMDIPT-MNVVSDAKGNGRITQVSINTKGSIRWVLAINIEEIEDFEFK 812

Query: 930  EILRSSFQLVI---R*GVDGWHIIQFSGGKAAPKKFNLTLFWMTTTELEGSKQALNXXXX 1100
            +  R+S +L+    +  VDGWHIIQFSGGK AP  F+LTL+W + +        L     
Sbjct: 813  D-ARNSEELISVDKKSSVDGWHIIQFSGGKNAPTLFDLTLYWRSGSTHNSDSPLLKLRTD 871

Query: 1101 XXXXXXXXXXKAERVLQKLPPWCTVFGKSTSPHTLAFLTSLPVDF 1235
                        ERVL+KLP WC++FGKSTSP+TLAFLT+LPV F
Sbjct: 872  VNRLTPI----TERVLEKLPRWCSLFGKSTSPYTLAFLTNLPVKF 912



 Score = 53.9 bits (128), Expect(2) = 6e-06
 Identities = 23/43 (53%), Positives = 34/43 (79%)
 Frame = +3

Query: 45  MTGAKRPMIIVACALFGLTVSAVLTGIVPPFTEDIARTVNMVY 173
           ++GAKR +I+    LF L+++ VLTG+VPPF+ED AR VN+V+
Sbjct: 654 LSGAKRAIILATLVLFSLSLAVVLTGVVPPFSEDTARAVNVVH 696



 Score = 23.5 bits (49), Expect(2) = 6e-06
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 2   FIRLVGTVIGIVIRYD 49
           FIRL  T+IG ++R+D
Sbjct: 603 FIRLAATLIGGMVRFD 618


>ref|XP_003591902.1| Endoplasmic reticulum metallopeptidase [Medicago truncatula]
            gi|355480950|gb|AES62153.1| Endoplasmic reticulum
            metallopeptidase [Medicago truncatula]
          Length = 917

 Score =  168 bits (426), Expect = 3e-39
 Identities = 96/224 (42%), Positives = 136/224 (60%), Gaps = 3/224 (1%)
 Frame = +3

Query: 573  MHVVEATGGSGENQTPISYISLFSFTPGKLIEEVEHVKEEGFVCGNTKVIDFVTFEVKYG 752
            +HVV+ATG   E  TP+SY+SLFS TPG L +EVE + E  FVCG  K IDFVTF VKYG
Sbjct: 700  VHVVDATGKLDEKHTPVSYVSLFSTTPGNLNQEVEQINES-FVCGKDKPIDFVTFSVKYG 758

Query: 753  CISSNDAKSGWDESDIPNCMLKVM*RKVTG*PKF*LIQKFLHAGCLLLIWIKLKTLSLKE 932
            C + N+  SGW E++IP   ++   ++     +  +  K      L +   +++  +L +
Sbjct: 759  CRTYNNTVSGWSEAEIPTMHVESDAKENGRITQVLINTKDSVRWVLAINTEEIEDFTLTD 818

Query: 933  ILRSSFQLVI---R*GVDGWHIIQFSGGKAAPKKFNLTLFWMTTTELEGSKQALNXXXXX 1103
              R+S +L+    +  VDGWHIIQFSGGK AP+ F+LTL+W + ++   +   L      
Sbjct: 819  -ARNSEELISADKKSSVDGWHIIQFSGGKNAPRLFDLTLYWKSGSQSTDNGFLLKLRTDV 877

Query: 1104 XXXXXXXXXKAERVLQKLPPWCTVFGKSTSPHTLAFLTSLPVDF 1235
                       ER+++KLP WC++FGKSTSPHTLAF  +LPV+F
Sbjct: 878  NRLTPI----TERIIEKLPRWCSLFGKSTSPHTLAFFRNLPVNF 917


>ref|XP_002274159.1| PREDICTED: endoplasmic reticulum metallopeptidase 1 [Vitis vinifera]
            gi|296086015|emb|CBI31456.3| unnamed protein product
            [Vitis vinifera]
          Length = 900

 Score =  164 bits (415), Expect = 5e-38
 Identities = 97/226 (42%), Positives = 125/226 (55%), Gaps = 5/226 (2%)
 Frame = +3

Query: 573  MHVVEATGGSGENQTPISYISLFSFTPGKLIEEVEHVKEEGFVCGNTKVIDFVTFEVKYG 752
            +HVV+ T   GE Q P SYIS+FS TPG LI+EVE + E GFVCG  KV+DFVTF VKYG
Sbjct: 676  VHVVDTTEKYGEMQDPRSYISIFSTTPGNLIKEVEQINE-GFVCGRDKVLDFVTFSVKYG 734

Query: 753  CISSNDAKSGWDESDIPNCMLKVM*RKVTG*PKF*LIQKFLHAGCLLLIWIKLKTLSLKE 932
            C++++D   GW +SDIP   +           +  +  K      L +   +++    KE
Sbjct: 735  CLTNDDIGGGWSKSDIPVLHVDSDTEGDGRTTQISIDTKVSTRWSLAINTQEIEDFLFKE 794

Query: 933  ILRSSFQLVIR*GVDGWHIIQFSGGKAAPKKFNLTLFWMTTT-----ELEGSKQALNXXX 1097
                   L  +   +GWHI QFSGGK +P +F+LTLFW   +       +G +       
Sbjct: 795  NSDELVPLGGKGSNNGWHIFQFSGGKNSPTRFDLTLFWRKNSTKSAHNADGQRAEQRPLL 854

Query: 1098 XXXXXXXXXXXKAERVLQKLPPWCTVFGKSTSPHTLAFLTSLPVDF 1235
                       KA RVL KLP WC+ FGKSTSP+ LAFLTSLPV F
Sbjct: 855  KLRTDVNRLTPKAARVLTKLPSWCSQFGKSTSPYNLAFLTSLPVLF 900



 Score = 52.8 bits (125), Expect(2) = 3e-06
 Identities = 22/43 (51%), Positives = 34/43 (79%)
 Frame = +3

Query: 45  MTGAKRPMIIVACALFGLTVSAVLTGIVPPFTEDIARTVNMVY 173
           ++GAK+ +++  C LFGL+++ VL+G VP FTED AR VN+V+
Sbjct: 635 LSGAKKSIVLSTCMLFGLSLAVVLSGTVPSFTEDTARAVNVVH 677



 Score = 25.8 bits (55), Expect(2) = 3e-06
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 2   FIRLVGTVIGIVIRYD 49
           FIR+ GT+IG  +R+D
Sbjct: 584 FIRMAGTLIGTAVRFD 599


>emb|CAN83785.1| hypothetical protein VITISV_008228 [Vitis vinifera]
          Length = 260

 Score =  164 bits (415), Expect = 5e-38
 Identities = 97/226 (42%), Positives = 125/226 (55%), Gaps = 5/226 (2%)
 Frame = +3

Query: 573  MHVVEATGGSGENQTPISYISLFSFTPGKLIEEVEHVKEEGFVCGNTKVIDFVTFEVKYG 752
            +HVV+ T   GE Q P SYIS+FS TPG LI+EVE + E GFVCG  KV+DFVTF VKYG
Sbjct: 36   VHVVDTTEKYGEMQDPRSYISIFSTTPGNLIKEVEQINE-GFVCGRDKVLDFVTFSVKYG 94

Query: 753  CISSNDAKSGWDESDIPNCMLKVM*RKVTG*PKF*LIQKFLHAGCLLLIWIKLKTLSLKE 932
            C++++D   GW +SDIP   +           +  +  K      L +   +++    KE
Sbjct: 95   CLTNDDIGGGWSKSDIPVLHVDSDTEGDGRTTQISIDTKVSTRWSLAINTQEIEDFLFKE 154

Query: 933  ILRSSFQLVIR*GVDGWHIIQFSGGKAAPKKFNLTLFWMTTT-----ELEGSKQALNXXX 1097
                   L  +   +GWHI QFSGGK +P +F+LTLFW   +       +G +       
Sbjct: 155  NSDELVPLGGKGSNNGWHIFQFSGGKNSPTRFDLTLFWRKNSTKSAHNADGQRAEQRPLL 214

Query: 1098 XXXXXXXXXXXKAERVLQKLPPWCTVFGKSTSPHTLAFLTSLPVDF 1235
                       KA RVL KLP WC+ FGKSTSP+ LAFLTSLPV F
Sbjct: 215  KLRTDVNRLTPKAARVLTKLPSWCSQFGKSTSPYNLAFLTSLPVLF 260


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