BLASTX nr result
ID: Coptis24_contig00016965
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00016965 (481 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004143447.1| PREDICTED: IMPACT family member in pol 5'reg... 130 1e-28 ref|XP_002530693.1| conserved hypothetical protein [Ricinus comm... 130 1e-28 ref|XP_002310870.1| predicted protein [Populus trichocarpa] gi|2... 127 7e-28 ref|XP_002272328.2| PREDICTED: IMPACT family member in pol 5'reg... 120 1e-25 emb|CAN77546.1| hypothetical protein VITISV_025214 [Vitis vinifera] 120 1e-25 >ref|XP_004143447.1| PREDICTED: IMPACT family member in pol 5'region-like [Cucumis sativus] gi|449518849|ref|XP_004166448.1| PREDICTED: IMPACT family member in pol 5'region-like [Cucumis sativus] Length = 248 Score = 130 bits (326), Expect = 1e-28 Identities = 59/90 (65%), Positives = 79/90 (87%), Gaps = 1/90 (1%) Frame = +3 Query: 3 YGGVASECLKNATTCLVKSKVSISMEVPYDLLGVVYHQIQSFQVQDVMQDYDTSNEGVT- 179 YGGVASECLK+A TC+VKSKV + +EVP+DLLGV+YHQ+QSFQV+D+ QDYD+ +G+T Sbjct: 159 YGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITM 218 Query: 180 VSFKVDYDKVDSLENAVKANCSRQIVVVKR 269 V+FKVD+D V+ LE+A+K+NCSR++V KR Sbjct: 219 VTFKVDFDCVEKLEDAIKSNCSRELVFYKR 248 >ref|XP_002530693.1| conserved hypothetical protein [Ricinus communis] gi|223529749|gb|EEF31688.1| conserved hypothetical protein [Ricinus communis] Length = 237 Score = 130 bits (326), Expect = 1e-28 Identities = 58/90 (64%), Positives = 78/90 (86%), Gaps = 1/90 (1%) Frame = +3 Query: 3 YGGVASECLKNATTCLVKSKVSISMEVPYDLLGVVYHQIQSFQVQDVMQDYDTSNEGVT- 179 YGGVASECL+NA TCLVKSK+ + +EVP+DL+G+++HQ+QSFQV ++MQDY+T +G+ Sbjct: 148 YGGVASECLRNAPTCLVKSKIPMGIEVPFDLIGILHHQLQSFQVDNIMQDYETGKDGIAM 207 Query: 180 VSFKVDYDKVDSLENAVKANCSRQIVVVKR 269 VSFKVD+D+V+ LE+A+KANCSR IV KR Sbjct: 208 VSFKVDFDQVEKLEDAIKANCSRDIVFYKR 237 >ref|XP_002310870.1| predicted protein [Populus trichocarpa] gi|222853773|gb|EEE91320.1| predicted protein [Populus trichocarpa] Length = 216 Score = 127 bits (320), Expect = 7e-28 Identities = 59/90 (65%), Positives = 76/90 (84%), Gaps = 1/90 (1%) Frame = +3 Query: 3 YGGVASECLKNATTCLVKSKVSISMEVPYDLLGVVYHQIQSFQVQDVMQDYDTSNEG-VT 179 YGGV SECL+NA TCLVKSKV +++EVP+DLLG+V HQ+Q FQV+D+ QDY+T +G Sbjct: 127 YGGVTSECLRNAPTCLVKSKVPMAVEVPFDLLGLVQHQLQHFQVEDIKQDYETGKDGFAM 186 Query: 180 VSFKVDYDKVDSLENAVKANCSRQIVVVKR 269 +SFKVD+D+V+ LENAVKANCSRQ+V K+ Sbjct: 187 ISFKVDFDQVEKLENAVKANCSRQLVFYKQ 216 >ref|XP_002272328.2| PREDICTED: IMPACT family member in pol 5'region-like [Vitis vinifera] gi|297742808|emb|CBI35524.3| unnamed protein product [Vitis vinifera] Length = 237 Score = 120 bits (301), Expect = 1e-25 Identities = 55/90 (61%), Positives = 74/90 (82%), Gaps = 1/90 (1%) Frame = +3 Query: 3 YGGVASECLKNATTCLVKSKVSISMEVPYDLLGVVYHQIQSFQVQDVMQDYDTSNEGVT- 179 YG A+ECLKNA TC VKSKV +++EVP++LLG++YHQ+QSF+V+D+ QDY+T EG T Sbjct: 148 YGRTAAECLKNAPTCFVKSKVPMAVEVPFELLGILYHQLQSFKVEDIKQDYETGKEGTTM 207 Query: 180 VSFKVDYDKVDSLENAVKANCSRQIVVVKR 269 V+FKVD+D+ SLE+AVK NCSR +V K+ Sbjct: 208 VTFKVDFDQAKSLEDAVKDNCSRDLVFYKK 237 >emb|CAN77546.1| hypothetical protein VITISV_025214 [Vitis vinifera] Length = 1043 Score = 120 bits (301), Expect = 1e-25 Identities = 55/90 (61%), Positives = 74/90 (82%), Gaps = 1/90 (1%) Frame = +3 Query: 3 YGGVASECLKNATTCLVKSKVSISMEVPYDLLGVVYHQIQSFQVQDVMQDYDTSNEGVT- 179 YG A+ECLKNA TC VKSKV +++EVP++LLG++YHQ+QSF+V+D+ QDY+T EG T Sbjct: 954 YGRTAAECLKNAPTCFVKSKVPMAVEVPFELLGILYHQLQSFKVEDIKQDYETGKEGTTM 1013 Query: 180 VSFKVDYDKVDSLENAVKANCSRQIVVVKR 269 V+FKVD+D+ SLE+AVK NCSR +V K+ Sbjct: 1014 VTFKVDFDQAKSLEDAVKDNCSRDLVFYKK 1043