BLASTX nr result

ID: Coptis24_contig00016965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016965
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143447.1| PREDICTED: IMPACT family member in pol 5'reg...   130   1e-28
ref|XP_002530693.1| conserved hypothetical protein [Ricinus comm...   130   1e-28
ref|XP_002310870.1| predicted protein [Populus trichocarpa] gi|2...   127   7e-28
ref|XP_002272328.2| PREDICTED: IMPACT family member in pol 5'reg...   120   1e-25
emb|CAN77546.1| hypothetical protein VITISV_025214 [Vitis vinifera]   120   1e-25

>ref|XP_004143447.1| PREDICTED: IMPACT family member in pol 5'region-like [Cucumis
           sativus] gi|449518849|ref|XP_004166448.1| PREDICTED:
           IMPACT family member in pol 5'region-like [Cucumis
           sativus]
          Length = 248

 Score =  130 bits (326), Expect = 1e-28
 Identities = 59/90 (65%), Positives = 79/90 (87%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   YGGVASECLKNATTCLVKSKVSISMEVPYDLLGVVYHQIQSFQVQDVMQDYDTSNEGVT- 179
           YGGVASECLK+A TC+VKSKV + +EVP+DLLGV+YHQ+QSFQV+D+ QDYD+  +G+T 
Sbjct: 159 YGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITM 218

Query: 180 VSFKVDYDKVDSLENAVKANCSRQIVVVKR 269
           V+FKVD+D V+ LE+A+K+NCSR++V  KR
Sbjct: 219 VTFKVDFDCVEKLEDAIKSNCSRELVFYKR 248


>ref|XP_002530693.1| conserved hypothetical protein [Ricinus communis]
           gi|223529749|gb|EEF31688.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 237

 Score =  130 bits (326), Expect = 1e-28
 Identities = 58/90 (64%), Positives = 78/90 (86%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   YGGVASECLKNATTCLVKSKVSISMEVPYDLLGVVYHQIQSFQVQDVMQDYDTSNEGVT- 179
           YGGVASECL+NA TCLVKSK+ + +EVP+DL+G+++HQ+QSFQV ++MQDY+T  +G+  
Sbjct: 148 YGGVASECLRNAPTCLVKSKIPMGIEVPFDLIGILHHQLQSFQVDNIMQDYETGKDGIAM 207

Query: 180 VSFKVDYDKVDSLENAVKANCSRQIVVVKR 269
           VSFKVD+D+V+ LE+A+KANCSR IV  KR
Sbjct: 208 VSFKVDFDQVEKLEDAIKANCSRDIVFYKR 237


>ref|XP_002310870.1| predicted protein [Populus trichocarpa] gi|222853773|gb|EEE91320.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/90 (65%), Positives = 76/90 (84%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   YGGVASECLKNATTCLVKSKVSISMEVPYDLLGVVYHQIQSFQVQDVMQDYDTSNEG-VT 179
           YGGV SECL+NA TCLVKSKV +++EVP+DLLG+V HQ+Q FQV+D+ QDY+T  +G   
Sbjct: 127 YGGVTSECLRNAPTCLVKSKVPMAVEVPFDLLGLVQHQLQHFQVEDIKQDYETGKDGFAM 186

Query: 180 VSFKVDYDKVDSLENAVKANCSRQIVVVKR 269
           +SFKVD+D+V+ LENAVKANCSRQ+V  K+
Sbjct: 187 ISFKVDFDQVEKLENAVKANCSRQLVFYKQ 216


>ref|XP_002272328.2| PREDICTED: IMPACT family member in pol 5'region-like [Vitis
           vinifera] gi|297742808|emb|CBI35524.3| unnamed protein
           product [Vitis vinifera]
          Length = 237

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/90 (61%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   YGGVASECLKNATTCLVKSKVSISMEVPYDLLGVVYHQIQSFQVQDVMQDYDTSNEGVT- 179
           YG  A+ECLKNA TC VKSKV +++EVP++LLG++YHQ+QSF+V+D+ QDY+T  EG T 
Sbjct: 148 YGRTAAECLKNAPTCFVKSKVPMAVEVPFELLGILYHQLQSFKVEDIKQDYETGKEGTTM 207

Query: 180 VSFKVDYDKVDSLENAVKANCSRQIVVVKR 269
           V+FKVD+D+  SLE+AVK NCSR +V  K+
Sbjct: 208 VTFKVDFDQAKSLEDAVKDNCSRDLVFYKK 237


>emb|CAN77546.1| hypothetical protein VITISV_025214 [Vitis vinifera]
          Length = 1043

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/90 (61%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3    YGGVASECLKNATTCLVKSKVSISMEVPYDLLGVVYHQIQSFQVQDVMQDYDTSNEGVT- 179
            YG  A+ECLKNA TC VKSKV +++EVP++LLG++YHQ+QSF+V+D+ QDY+T  EG T 
Sbjct: 954  YGRTAAECLKNAPTCFVKSKVPMAVEVPFELLGILYHQLQSFKVEDIKQDYETGKEGTTM 1013

Query: 180  VSFKVDYDKVDSLENAVKANCSRQIVVVKR 269
            V+FKVD+D+  SLE+AVK NCSR +V  K+
Sbjct: 1014 VTFKVDFDQAKSLEDAVKDNCSRDLVFYKK 1043


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