BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016958
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein...    93   4e-17
emb|CBI23315.3| unnamed protein product [Vitis vinifera]               93   4e-17
ref|XP_002300142.1| f-box family protein [Populus trichocarpa] g...    86   7e-15
emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]    82   8e-14
emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]    81   1e-13

>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
           vinifera]
          Length = 610

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 70/203 (34%), Positives = 106/203 (52%), Gaps = 16/203 (7%)
 Frame = -2

Query: 566 LPSPLFSCDSVKWLSLAYCIIDRDRQISWNSLGELCLKEVRLSDDVVQKILSGAPLLVEL 387
           LP  L++  S+  LSL +C I     ISW SL  L +  V L DD++++ILSG P L  L
Sbjct: 196 LPQFLYANSSIVKLSLWFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCPALESL 255

Query: 386 TLYFCTGMENLNITSRNLKILHLS-------LTSQSKLSISAPYLRTLEIRGGV--ARYN 234
            L+ C G+ +LNITS +LK L ++          +S L ISAP +++L I G +      
Sbjct: 256 ELHHCFGINSLNITSASLKKLVINRYWDSSHSHHRSVLKISAPNVQSLGILGNMYTKECR 315

Query: 233 LMKVSSLSMVKIFPGMAIIGSSHQDKLE-------RLLQSVQHAQYLTLSSHCLQVLYML 75
           +  V SL    +   +A+   + +D  +       +LL+SV H + LT+ + C+QVL + 
Sbjct: 316 VKNVPSLFDASLNFELAMQEGNPKDHYKLYHKVVMKLLKSVNHVKALTVGTWCIQVLSIF 375

Query: 74  EVKGFPTSYSQCSFLELRTDMNK 6
           E K   +  S    L L T +NK
Sbjct: 376 EGKDLSSLLSNLKCLILDTHLNK 398


>emb|CBI23315.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 70/203 (34%), Positives = 106/203 (52%), Gaps = 16/203 (7%)
 Frame = -2

Query: 566 LPSPLFSCDSVKWLSLAYCIIDRDRQISWNSLGELCLKEVRLSDDVVQKILSGAPLLVEL 387
           LP  L++  S+  LSL +C I     ISW SL  L +  V L DD++++ILSG P L  L
Sbjct: 104 LPQFLYANSSIVKLSLWFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCPALESL 163

Query: 386 TLYFCTGMENLNITSRNLKILHLS-------LTSQSKLSISAPYLRTLEIRGGV--ARYN 234
            L+ C G+ +LNITS +LK L ++          +S L ISAP +++L I G +      
Sbjct: 164 ELHHCFGINSLNITSASLKKLVINRYWDSSHSHHRSVLKISAPNVQSLGILGNMYTKECR 223

Query: 233 LMKVSSLSMVKIFPGMAIIGSSHQDKLE-------RLLQSVQHAQYLTLSSHCLQVLYML 75
           +  V SL    +   +A+   + +D  +       +LL+SV H + LT+ + C+QVL + 
Sbjct: 224 VKNVPSLFDASLNFELAMQEGNPKDHYKLYHKVVMKLLKSVNHVKALTVGTWCIQVLSIF 283

Query: 74  EVKGFPTSYSQCSFLELRTDMNK 6
           E K   +  S    L L T +NK
Sbjct: 284 EGKDLSSLLSNLKCLILDTHLNK 306


>ref|XP_002300142.1| f-box family protein [Populus trichocarpa]
           gi|222847400|gb|EEE84947.1| f-box family protein
           [Populus trichocarpa]
          Length = 481

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 20/209 (9%)
 Frame = -2

Query: 572 FKLPSPLFSCDSVKWLSLAYCIIDRDR--QISWNSLGELCLKEVRLSDDVVQKILSGAPL 399
           + LP+ L+S    + LSL +C +  ++  Q+SW SL  L +    LS+++++ I  G  L
Sbjct: 165 YYLPNFLYSNIPAEKLSLRFCALSPNKLKQVSWMSLKVLSISYSWLSNEMIKNIFLGCSL 224

Query: 398 LVELTLYFCTGMENLNIT-SRNLKILHL--SLTSQSK-----LSISAPYLRTLEIRGGVA 243
           L  L L  C G + +N   S +LK L +  S   + K     ++I  P L +L + G + 
Sbjct: 225 LEYLKLNQCCGFDQINTNFSSSLKDLVVDGSWGPEDKFGDFVITIKGPNLLSLTLAGYMH 284

Query: 242 RYNLMKVSSLSMVKIFPGMAIIG----------SSHQDKLERLLQSVQHAQYLTLSSHCL 93
           R N M +   S+V+   G  +            S+H+  L  LL+ +QH + LT+ + CL
Sbjct: 285 RANYMLLDVSSLVEASIGYRMKSCSHGCRSNWYSAHRSVLHDLLEKLQHVEKLTIGTWCL 344

Query: 92  QVLYMLEVKGFPTSYSQCSFLELRTDMNK 6
           QVL + EVKG  +  S C +L L   +NK
Sbjct: 345 QVLSISEVKGLSSPTSACKYLTLNKKINK 373


>emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]
          Length = 891

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 16/176 (9%)
 Frame = -2

Query: 566 LPSPLFSCDSVKWLSLAYCIIDRDRQISWNSLGELCLKEVRLSDDVVQKILSGAPLLVEL 387
           LP  L++  S+  LSL +C I     ISW SL  L +  V L DD++++ILSG P L  L
Sbjct: 196 LPQFLYANSSIVKLSLWFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCPALESL 255

Query: 386 TLYFCTGMENLNITSRNLKILHLS-------LTSQSKLSISAPYLRTLEIRGGV--ARYN 234
            L+ C G+ +LNITS +LK L ++          +S L ISAP +++L I G +      
Sbjct: 256 ELHHCFGINSLNITSASLKKLVINRYWDSSHSHHRSVLKISAPNVQSLGILGNMYTKECR 315

Query: 233 LMKVSSLSMVKIFPGMAIIGSSHQDKLE-------RLLQSVQHAQYLTLSSHCLQV 87
           +  V SL    +   +A+   + +D  +       +LL+SV H + LT+ + C+Q+
Sbjct: 316 VKNVPSLFDASLNFELAMQEGNPKDHYKLYHKVVMKLLKSVNHVKALTVGTWCIQI 371


>emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]
          Length = 526

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
 Frame = -2

Query: 572 FKLPSPLFSCDSVKWLSLAYCIIDRDRQISWNSLGELCLKEVRLSDDVVQKILSGAPLLV 393
           + LP  +F   S + L+  +C       +SW  L  L +    L+++ ++ IL G+P L 
Sbjct: 168 YLLPQFIFRHSSFRKLATRFCNFVTYGVVSWAWLKSLSIGYAELNEETIRNILMGSPALE 227

Query: 392 ELTLYFCTGMENLNITSRNLKILHL-------SLTSQSKLSISAPYLRTLEIRGGVARY- 237
            L  + C G   +NI S +LK L +           ++ L +SAP +R+LE+ G   +  
Sbjct: 228 CLEFHRCHGFARINICSESLKKLSILEPWAPNDAEGETVLEVSAPNIRSLELSGNWEKMC 287

Query: 236 NLMKVSSLSMVKIFPGM-------AIIGSSHQDKLERLLQSVQHAQYLTLSSHCLQVLYM 78
            L+ +SSL   K+   M             + + L  +L+ + H + LT+ + CL+VL +
Sbjct: 288 RLLDMSSLVNAKLDIQMMHQDRNFQYFSEDYSNMLREILKQLSHVENLTVGTWCLEVLSV 347

Query: 77  LEVKGFPTSYSQCSFLELRT 18
           LE+K  P+  S+  +L L T
Sbjct: 348 LEMKSMPSPLSKHRYLILNT 367