BLASTX nr result

ID: Coptis24_contig00016950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016950
         (1053 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514605.1| conserved hypothetical protein [Ricinus comm...   246   9e-63
ref|XP_002273093.1| PREDICTED: uncharacterized protein LOC100247...   246   9e-63
ref|XP_003524494.1| PREDICTED: uncharacterized protein LOC100799...   229   9e-58
ref|XP_003549581.1| PREDICTED: uncharacterized protein LOC100806...   229   1e-57
ref|XP_002305296.1| predicted protein [Populus trichocarpa] gi|2...   220   5e-55

>ref|XP_002514605.1| conserved hypothetical protein [Ricinus communis]
            gi|223546209|gb|EEF47711.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 367

 Score =  246 bits (627), Expect = 9e-63
 Identities = 141/290 (48%), Positives = 186/290 (64%), Gaps = 14/290 (4%)
 Frame = -2

Query: 1052 NLVEMIPLVESLMDGRANSSFTRRASMVYTKTPYREMYPKKIGELKGRKAAQSILAKK-- 879
            N+VEM+PL+ESL+  + NSSFTRR SM+YTKTP R+   KK+ + KGR A+QSI  KK  
Sbjct: 62   NIVEMVPLIESLIHRKGNSSFTRRGSMIYTKTPSRDSLYKKMTDPKGRNASQSIPTKKKK 121

Query: 878  ------RGVS------TDEYSIFTARPSSLDKGREPLLMLQEQVXXXXXXXXXXXXXXXX 735
                  RG S      +D +SIF++R  + +K  E L+ L+EQV                
Sbjct: 122  EHGDKDRGKSGGNNQDSDNFSIFSSRSLASEKDIEELVTLREQVEDLQRKLAEKDELLKS 181

Query: 734  XXXSVSLISSLQVKLDELKCQVAEKDSLFRSVHLQLSEAKINLADKQAALEKLRWEASES 555
               S + ++ +  KLDELK Q AEKDSL +S+ LQLS+AKI LADKQAALEK+RWEA  S
Sbjct: 182  AEISKNQMNDVHGKLDELKHQAAEKDSLIKSIQLQLSDAKIKLADKQAALEKIRWEAMTS 241

Query: 554  NRKVEKLREDLESMQGEVSTFMLVLEGLIASDETHSVDYDIIPYNLDQLSYIDHMNEMEM 375
            N KVEKL+E+L+S QG++S+ ML+ EGL       + DYD+ P  LD L  ID M+++EM
Sbjct: 242  NTKVEKLQEELDSKQGDISSMMLLFEGLTNESTKIAEDYDVNPRYLDYLPDIDDMDDIEM 301

Query: 374  QKMEEARETYITALTIAKESQDEESLEIVSKARLRLQYLALKPRSENSTN 225
            Q+MEEAR+ YI A+  AKE QDEES+   + ARL LQ   L+    N+ N
Sbjct: 302  QEMEEARQAYIAAVATAKEKQDEESIAAAASARLHLQSFVLRSNGRNAGN 351


>ref|XP_002273093.1| PREDICTED: uncharacterized protein LOC100247402 [Vitis vinifera]
            gi|297734104|emb|CBI15351.3| unnamed protein product
            [Vitis vinifera]
          Length = 368

 Score =  246 bits (627), Expect = 9e-63
 Identities = 141/294 (47%), Positives = 189/294 (64%), Gaps = 17/294 (5%)
 Frame = -2

Query: 1052 NLVEMIPLVESLMDGRANSSFTRRASMVYTKTPYREMYPKKIGELKGRKAAQSILAKKR- 876
            +LVE++PLV+SL+D +A+SSFTR  ++ YTKTP RE   ++  ELKGR  AQSI  KKR 
Sbjct: 59   DLVEIVPLVQSLIDRKASSSFTRVGAVTYTKTPSRESLSRRFSELKGRNTAQSIPTKKRR 118

Query: 875  ---------------GVSTDEYSIFTARPSSLDKGREPLLMLQEQVXXXXXXXXXXXXXX 741
                               D +S+F++R  + +K +E L+ L+EQV              
Sbjct: 119  DHGEKDQGRNGSNNQDGCADGFSLFSSRAVASEKDKEELIALREQVEDLQRKLAEKDELL 178

Query: 740  XXXXXSVSLISSLQVKLDELKCQVAEKDSLFRSVHLQLSEAKINLADKQAALEKLRWEAS 561
                 S S +S++  KLDELK QVAEKDSL +S  LQLS+AKI LADKQAALEK++WEA 
Sbjct: 179  KSAEISKSQMSAVHDKLDELKQQVAEKDSLIKSTQLQLSDAKIKLADKQAALEKIQWEAM 238

Query: 560  ESNRKVEKLREDLESMQGEVSTFMLVLEGLIASDET-HSVDYDIIPYNLDQLSYIDHMNE 384
             SNRKVEKL+EDLESMQ ++S+FML+ EGL  +D T  S  YDI PY+L  L  ID ++E
Sbjct: 239  TSNRKVEKLQEDLESMQADISSFMLLFEGLTKNDSTIRSESYDITPYHLGHLPPIDDLDE 298

Query: 383  MEMQKMEEARETYITALTIAKESQDEESLEIVSKARLRLQYLALKPRSENSTNA 222
            +  QKMEEAR+ Y+ A+  AKE+QDEES+ + + +RL LQ    K  + + + A
Sbjct: 299  IGAQKMEEARKAYVAAVAAAKENQDEESIALAANSRLHLQSFVFKNHNMDVSRA 352


>ref|XP_003524494.1| PREDICTED: uncharacterized protein LOC100799930 [Glycine max]
          Length = 327

 Score =  229 bits (584), Expect = 9e-58
 Identities = 129/286 (45%), Positives = 183/286 (63%), Gaps = 13/286 (4%)
 Frame = -2

Query: 1052 NLVEMIPLVESLMDGRANSSFTRRASMVYTKTPYREMYPKKIGELKGRKAAQSILAKKR- 876
            +LVE++PLV+SL+D +A+ SFTRR SM+YTKTP RE   K+  + K R  AQSILAKK+ 
Sbjct: 41   DLVEIVPLVQSLIDRKASRSFTRRGSMIYTKTPTRESLSKRTTDSKSRNVAQSILAKKKR 100

Query: 875  -----------GVSTDEYSIFTARPSSLDKGREPLLMLQEQVXXXXXXXXXXXXXXXXXX 729
                           D YS+F+ R  + +K  E L ML+EQV                  
Sbjct: 101  DHGEKEQGKNGSNDADNYSMFSTRTLASEKDIEELGMLKEQVEELQRKLLEKDELLKSAE 160

Query: 728  XSVSLISSLQVKLDELKCQVAEKDSLFRSVHLQLSEAKINLADKQAALEKLRWEASESNR 549
             S   +++   KLDELK Q +EK+SL +    QLS+AKI LADKQAALEK++WEA  SN+
Sbjct: 161  NSRDQMNAFNAKLDELKHQASEKESLLKYTQQQLSDAKIKLADKQAALEKIQWEAMTSNK 220

Query: 548  KVEKLREDLESMQGEVSTFMLVLEGLIASDET-HSVDYDIIPYNLDQLSYIDHMNEMEMQ 372
            KV+KL ++L SMQ ++++F L+LEGL  +D   ++ DYD+ PY+   L  ID ++E+E+Q
Sbjct: 221  KVDKLLDELGSMQADITSFTLLLEGLSKTDTAKYTNDYDVKPYDFSHLPSIDDLDEVELQ 280

Query: 371  KMEEARETYITALTIAKESQDEESLEIVSKARLRLQYLALKPRSEN 234
            KM+EAR+ Y+ A++I+KE +DEES+   + ARL LQ L  K ++ N
Sbjct: 281  KMDEARKAYMAAVSISKEKRDEESIAAAANARLHLQSLVFKSKNFN 326


>ref|XP_003549581.1| PREDICTED: uncharacterized protein LOC100806411 [Glycine max]
          Length = 327

 Score =  229 bits (583), Expect = 1e-57
 Identities = 127/286 (44%), Positives = 184/286 (64%), Gaps = 13/286 (4%)
 Frame = -2

Query: 1052 NLVEMIPLVESLMDGRANSSFTRRASMVYTKTPYREMYPKKIGELKGRKAAQSILAKKR- 876
            +LVE++PLV+SL+D +A+ SFTRR SM+YTKTP RE   K++ + K R  A SI AKK+ 
Sbjct: 41   DLVEIVPLVQSLIDRKASRSFTRRGSMIYTKTPTRESLSKRVTDSKSRNVAPSIPAKKKR 100

Query: 875  -----------GVSTDEYSIFTARPSSLDKGREPLLMLQEQVXXXXXXXXXXXXXXXXXX 729
                           D YS+F++R  + +K  E L ML+EQV                  
Sbjct: 101  DHGEKEQGKNGSNDADNYSMFSSRTLASEKDIEELGMLKEQVEELQRKLLEKDELLKSAE 160

Query: 728  XSVSLISSLQVKLDELKCQVAEKDSLFRSVHLQLSEAKINLADKQAALEKLRWEASESNR 549
             +   ++    KLDELK Q +EK+SL +    QLS+AKI LADKQAALEK++WEA  SN+
Sbjct: 161  NTRDQMNVFNAKLDELKHQASEKESLLKYTQQQLSDAKIKLADKQAALEKIQWEAMTSNK 220

Query: 548  KVEKLREDLESMQGEVSTFMLVLEGLIASDET-HSVDYDIIPYNLDQLSYIDHMNEMEMQ 372
            KV+KL+++L SMQ ++++F L+LEGL  +D   ++ DYD+ PY+   L  ID ++EME+Q
Sbjct: 221  KVDKLQDELGSMQADITSFTLLLEGLSKTDTAKYTDDYDVKPYDFSHLPSIDDLDEMELQ 280

Query: 371  KMEEARETYITALTIAKESQDEESLEIVSKARLRLQYLALKPRSEN 234
            KMEEAR++Y+ A++++KE +DEES+   + ARL LQ L  K ++ N
Sbjct: 281  KMEEARKSYMAAVSVSKEKRDEESIAAAANARLHLQSLVFKSKNFN 326


>ref|XP_002305296.1| predicted protein [Populus trichocarpa] gi|222848260|gb|EEE85807.1|
            predicted protein [Populus trichocarpa]
          Length = 340

 Score =  220 bits (560), Expect = 5e-55
 Identities = 129/279 (46%), Positives = 176/279 (63%), Gaps = 16/279 (5%)
 Frame = -2

Query: 1052 NLVEMIPLVESLMDGRANSSFTRRASMVYTKTPYREMYPKKIGELKGRKAAQSILAKKR- 876
            +LVEM+PLV+SL+D + ++SFTRR S++YTKTP RE   KK+ + +GR   QSI  KK+ 
Sbjct: 58   DLVEMVPLVQSLIDRKVSTSFTRRGSVIYTKTPSRESLSKKMIDPRGRNTCQSIPTKKKM 117

Query: 875  -------------GVSTDEYSIFTA-RPSSLDKGREPLLMLQEQVXXXXXXXXXXXXXXX 738
                             D ++I ++ R     K  E L+ L+EQV               
Sbjct: 118  DHGDKDQGKTANDNQDADSFAILSSSRAVPTGKDAEELIALREQVEDLQRKLLEKDELLK 177

Query: 737  XXXXSVSLISSLQVKLDELKCQVAEKDSLFRSVHLQLSEAKINLADKQAALEKLRWEASE 558
                S + ++++  + DE+K QVAEKDSL +S  LQLS AKI LADKQAALEKL+WEA  
Sbjct: 178  SAEVSKNQMNAVHAEFDEVKLQVAEKDSLIKSTQLQLSNAKIKLADKQAALEKLQWEAMT 237

Query: 557  SNRKVEKLREDLESMQGEVSTFMLVLEGLIASDE-THSVDYDIIPYNLDQLSYIDHMNEM 381
            SN+KVE L+++L+S+QG +S+FMLV E L  ++   ++ DYDI P  LDQL  ID +++ 
Sbjct: 238  SNQKVETLQQELDSIQGGISSFMLVFENLTKNNSIPYAEDYDIKPCYLDQLPDIDDLDDR 297

Query: 380  EMQKMEEARETYITALTIAKESQDEESLEIVSKARLRLQ 264
            EMQKMEEARE YI A+  AKE QDE+S+   + ARL LQ
Sbjct: 298  EMQKMEEAREAYIAAVASAKEKQDEKSIAAAASARLHLQ 336


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