BLASTX nr result

ID: Coptis24_contig00016948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016948
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627107.1| hypothetical protein MTR_8g017190 [Medicago ...    67   2e-09
gb|AFK39637.1| unknown [Lotus japonicus]                               66   3e-09
ref|XP_003529825.1| PREDICTED: uncharacterized protein LOC100526...    66   4e-09
ref|XP_002527398.1| conserved hypothetical protein [Ricinus comm...    65   5e-09
dbj|BAB02909.1| unnamed protein product [Arabidopsis thaliana]         64   1e-08

>ref|XP_003627107.1| hypothetical protein MTR_8g017190 [Medicago truncatula]
           gi|355521129|gb|AET01583.1| hypothetical protein
           MTR_8g017190 [Medicago truncatula]
          Length = 66

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/66 (59%), Positives = 43/66 (65%)
 Frame = -1

Query: 459 MEVKPTVALRAIFAGGLAVFAKVAGAMKAAGSVKVGXXXXXXXXXXXXAVSGSKPEQNEA 280
           M VKPTVALRAI  GG+A FAK+AGAMKAAG VK+G            AV+GSK EQ   
Sbjct: 1   MAVKPTVALRAILVGGIAAFAKIAGAMKAAGGVKMGAAAAAMTAAATAAVTGSKQEQ--- 57

Query: 279 PKKPSQ 262
            K PSQ
Sbjct: 58  -KDPSQ 62


>gb|AFK39637.1| unknown [Lotus japonicus]
          Length = 66

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/63 (55%), Positives = 43/63 (68%)
 Frame = -1

Query: 459 MEVKPTVALRAIFAGGLAVFAKVAGAMKAAGSVKVGXXXXXXXXXXXXAVSGSKPEQNEA 280
           M VKPTVALRAI  GG+A FAKVAGAMKAAG VK+G            A++GSK E+ +A
Sbjct: 1   MAVKPTVALRAILVGGIAAFAKVAGAMKAAGGVKIGAAAAAMTAAATAAMTGSKQEEKDA 60

Query: 279 PKK 271
            ++
Sbjct: 61  AQQ 63


>ref|XP_003529825.1| PREDICTED: uncharacterized protein LOC100526960 [Glycine max]
           gi|255631254|gb|ACU15994.1| unknown [Glycine max]
          Length = 66

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 35/63 (55%), Positives = 42/63 (66%)
 Frame = -1

Query: 459 MEVKPTVALRAIFAGGLAVFAKVAGAMKAAGSVKVGXXXXXXXXXXXXAVSGSKPEQNEA 280
           M VKPTVALRAI  GG+A FAK+AGAMKAAG  K+G            AV+GSK EQ +A
Sbjct: 1   MAVKPTVALRAILVGGIAAFAKIAGAMKAAGGAKMGAAAAAMTAAATAAVAGSKQEQTDA 60

Query: 279 PKK 271
            ++
Sbjct: 61  SQQ 63


>ref|XP_002527398.1| conserved hypothetical protein [Ricinus communis]
           gi|223533208|gb|EEF34964.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 64

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 36/64 (56%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
 Frame = -1

Query: 459 MEVKPTVALRAIFAGGLAVFAKVAGAMKAAGSVKVGXXXXXXXXXXXXAVSGSKPEQNE- 283
           M VKPTVALRAIF GG+AVFAKVAG MKAAG  K+G            A+SG+K +Q + 
Sbjct: 1   MAVKPTVALRAIFVGGIAVFAKVAGVMKAAGGAKLGAAATAMTIAASAAISGTKQDQKDV 60

Query: 282 APKK 271
           +P K
Sbjct: 61  SPSK 64


>dbj|BAB02909.1| unnamed protein product [Arabidopsis thaliana]
          Length = 131

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
 Frame = -1

Query: 474 GIRRKMEVKPTVALRAIFAGGLAVFAKVAGAMKAAGSVKVGXXXXXXXXXXXXAVS-GSK 298
           G+ +KM VKPTVALR I  GG+A+FAKVA AMKAAG VK+G            AVS GSK
Sbjct: 57  GLDKKMSVKPTVALRGILVGGVAIFAKVAAAMKAAGGVKLGAAATAMTVAATAAVSGGSK 116

Query: 297 PEQNEAPKK 271
            +Q +   K
Sbjct: 117 QDQKQDASK 125


Top