BLASTX nr result

ID: Coptis24_contig00016940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016940
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526813.1| conserved hypothetical protein [Ricinus comm...    75   3e-13
ref|XP_003634532.1| PREDICTED: uncharacterized protein LOC100252...    72   7e-13
emb|CBI18163.3| unnamed protein product [Vitis vinifera]               72   7e-13
ref|XP_002325554.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-11
ref|XP_003590256.1| Erythroid differentiation-related factor [Me...    64   2e-10

>ref|XP_002526813.1| conserved hypothetical protein [Ricinus communis]
            gi|223533817|gb|EEF35548.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1420

 Score = 74.7 bits (182), Expect(2) = 3e-13
 Identities = 36/58 (62%), Positives = 44/58 (75%)
 Frame = +1

Query: 364  TKEVSNGRIGGILKFLKGPIAGDTDYNLSAALSCYNAARKALAGLQTGSAELQSVLKR 537
            +KE+   + GGI K+L+  + GD +YNLS ALSCY  ARKALAGL TGSAELQSV K+
Sbjct: 978  SKEIPKVKSGGIFKYLRDFVVGDVEYNLSIALSCYEEARKALAGLPTGSAELQSVFKK 1035



 Score = 25.4 bits (54), Expect(2) = 3e-13
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 528  FKKKGWVCNE 557
            FKK GWVCNE
Sbjct: 1033 FKKIGWVCNE 1042


>ref|XP_003634532.1| PREDICTED: uncharacterized protein LOC100252053 [Vitis vinifera]
          Length = 1432

 Score = 72.4 bits (176), Expect(2) = 7e-13
 Identities = 35/57 (61%), Positives = 41/57 (71%)
 Frame = +1

Query: 370  EVSNGRIGGILKFLKGPIAGDTDYNLSAALSCYNAARKALAGLQTGSAELQSVLKRK 540
            E    + GGI K+  GP+ GD DYNLSAALSCY  A +AL  L TGSAELQSV+K+K
Sbjct: 990  ETPKTKNGGIFKYFGGPVVGDADYNLSAALSCYEEAIRALGELPTGSAELQSVIKKK 1046



 Score = 26.2 bits (56), Expect(2) = 7e-13
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +3

Query: 531  KKKGWVCNE 557
            KKKGWVCNE
Sbjct: 1044 KKKGWVCNE 1052


>emb|CBI18163.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score = 72.4 bits (176), Expect(2) = 7e-13
 Identities = 35/57 (61%), Positives = 41/57 (71%)
 Frame = +1

Query: 370  EVSNGRIGGILKFLKGPIAGDTDYNLSAALSCYNAARKALAGLQTGSAELQSVLKRK 540
            E    + GGI K+  GP+ GD DYNLSAALSCY  A +AL  L TGSAELQSV+K+K
Sbjct: 917  ETPKTKNGGIFKYFGGPVVGDADYNLSAALSCYEEAIRALGELPTGSAELQSVIKKK 973



 Score = 26.2 bits (56), Expect(2) = 7e-13
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +3

Query: 531 KKKGWVCNE 557
           KKKGWVCNE
Sbjct: 971 KKKGWVCNE 979


>ref|XP_002325554.1| predicted protein [Populus trichocarpa] gi|222862429|gb|EEE99935.1|
           predicted protein [Populus trichocarpa]
          Length = 1171

 Score = 69.3 bits (168), Expect(2) = 5e-11
 Identities = 32/49 (65%), Positives = 39/49 (79%)
 Frame = +1

Query: 391 GGILKFLKGPIAGDTDYNLSAALSCYNAARKALAGLQTGSAELQSVLKR 537
           GGI K++  P   D ++NLSAALSCY  ARKAL+GL TGSAELQSV+K+
Sbjct: 737 GGIFKYISNPAVRDAEFNLSAALSCYQEARKALSGLPTGSAELQSVIKK 785



 Score = 23.1 bits (48), Expect(2) = 5e-11
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 531 KKKGWVCNE 557
           KK GWVCNE
Sbjct: 784 KKIGWVCNE 792


>ref|XP_003590256.1| Erythroid differentiation-related factor [Medicago truncatula]
            gi|355479304|gb|AES60507.1| Erythroid
            differentiation-related factor [Medicago truncatula]
          Length = 1433

 Score = 64.3 bits (155), Expect(2) = 2e-10
 Identities = 29/59 (49%), Positives = 42/59 (71%)
 Frame = +1

Query: 364  TKEVSNGRIGGILKFLKGPIAGDTDYNLSAALSCYNAARKALAGLQTGSAELQSVLKRK 540
            ++E    +IGGI ++L  P+ GD ++NL A+L CY  ARKAL  L +G +ELQSV+K+K
Sbjct: 992  SRETGKAKIGGIFEYLAEPLVGDAEHNLLASLKCYEEARKALFKLPSGLSELQSVIKKK 1050



 Score = 26.2 bits (56), Expect(2) = 2e-10
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +3

Query: 531  KKKGWVCNE 557
            KKKGWVCNE
Sbjct: 1048 KKKGWVCNE 1056


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