BLASTX nr result
ID: Coptis24_contig00016940
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00016940 (557 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002526813.1| conserved hypothetical protein [Ricinus comm... 75 3e-13 ref|XP_003634532.1| PREDICTED: uncharacterized protein LOC100252... 72 7e-13 emb|CBI18163.3| unnamed protein product [Vitis vinifera] 72 7e-13 ref|XP_002325554.1| predicted protein [Populus trichocarpa] gi|2... 69 5e-11 ref|XP_003590256.1| Erythroid differentiation-related factor [Me... 64 2e-10 >ref|XP_002526813.1| conserved hypothetical protein [Ricinus communis] gi|223533817|gb|EEF35548.1| conserved hypothetical protein [Ricinus communis] Length = 1420 Score = 74.7 bits (182), Expect(2) = 3e-13 Identities = 36/58 (62%), Positives = 44/58 (75%) Frame = +1 Query: 364 TKEVSNGRIGGILKFLKGPIAGDTDYNLSAALSCYNAARKALAGLQTGSAELQSVLKR 537 +KE+ + GGI K+L+ + GD +YNLS ALSCY ARKALAGL TGSAELQSV K+ Sbjct: 978 SKEIPKVKSGGIFKYLRDFVVGDVEYNLSIALSCYEEARKALAGLPTGSAELQSVFKK 1035 Score = 25.4 bits (54), Expect(2) = 3e-13 Identities = 9/10 (90%), Positives = 9/10 (90%) Frame = +3 Query: 528 FKKKGWVCNE 557 FKK GWVCNE Sbjct: 1033 FKKIGWVCNE 1042 >ref|XP_003634532.1| PREDICTED: uncharacterized protein LOC100252053 [Vitis vinifera] Length = 1432 Score = 72.4 bits (176), Expect(2) = 7e-13 Identities = 35/57 (61%), Positives = 41/57 (71%) Frame = +1 Query: 370 EVSNGRIGGILKFLKGPIAGDTDYNLSAALSCYNAARKALAGLQTGSAELQSVLKRK 540 E + GGI K+ GP+ GD DYNLSAALSCY A +AL L TGSAELQSV+K+K Sbjct: 990 ETPKTKNGGIFKYFGGPVVGDADYNLSAALSCYEEAIRALGELPTGSAELQSVIKKK 1046 Score = 26.2 bits (56), Expect(2) = 7e-13 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = +3 Query: 531 KKKGWVCNE 557 KKKGWVCNE Sbjct: 1044 KKKGWVCNE 1052 >emb|CBI18163.3| unnamed protein product [Vitis vinifera] Length = 1359 Score = 72.4 bits (176), Expect(2) = 7e-13 Identities = 35/57 (61%), Positives = 41/57 (71%) Frame = +1 Query: 370 EVSNGRIGGILKFLKGPIAGDTDYNLSAALSCYNAARKALAGLQTGSAELQSVLKRK 540 E + GGI K+ GP+ GD DYNLSAALSCY A +AL L TGSAELQSV+K+K Sbjct: 917 ETPKTKNGGIFKYFGGPVVGDADYNLSAALSCYEEAIRALGELPTGSAELQSVIKKK 973 Score = 26.2 bits (56), Expect(2) = 7e-13 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = +3 Query: 531 KKKGWVCNE 557 KKKGWVCNE Sbjct: 971 KKKGWVCNE 979 >ref|XP_002325554.1| predicted protein [Populus trichocarpa] gi|222862429|gb|EEE99935.1| predicted protein [Populus trichocarpa] Length = 1171 Score = 69.3 bits (168), Expect(2) = 5e-11 Identities = 32/49 (65%), Positives = 39/49 (79%) Frame = +1 Query: 391 GGILKFLKGPIAGDTDYNLSAALSCYNAARKALAGLQTGSAELQSVLKR 537 GGI K++ P D ++NLSAALSCY ARKAL+GL TGSAELQSV+K+ Sbjct: 737 GGIFKYISNPAVRDAEFNLSAALSCYQEARKALSGLPTGSAELQSVIKK 785 Score = 23.1 bits (48), Expect(2) = 5e-11 Identities = 8/9 (88%), Positives = 8/9 (88%) Frame = +3 Query: 531 KKKGWVCNE 557 KK GWVCNE Sbjct: 784 KKIGWVCNE 792 >ref|XP_003590256.1| Erythroid differentiation-related factor [Medicago truncatula] gi|355479304|gb|AES60507.1| Erythroid differentiation-related factor [Medicago truncatula] Length = 1433 Score = 64.3 bits (155), Expect(2) = 2e-10 Identities = 29/59 (49%), Positives = 42/59 (71%) Frame = +1 Query: 364 TKEVSNGRIGGILKFLKGPIAGDTDYNLSAALSCYNAARKALAGLQTGSAELQSVLKRK 540 ++E +IGGI ++L P+ GD ++NL A+L CY ARKAL L +G +ELQSV+K+K Sbjct: 992 SRETGKAKIGGIFEYLAEPLVGDAEHNLLASLKCYEEARKALFKLPSGLSELQSVIKKK 1050 Score = 26.2 bits (56), Expect(2) = 2e-10 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = +3 Query: 531 KKKGWVCNE 557 KKKGWVCNE Sbjct: 1048 KKKGWVCNE 1056