BLASTX nr result

ID: Coptis24_contig00016929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016929
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40944.1| unknown [Medicago truncatula]                           96   3e-18
ref|XP_003638735.1| Membrane protein, putative [Medicago truncat...    96   3e-18
ref|XP_003638145.1| Membrane protein, putative [Medicago truncat...    96   3e-18
ref|XP_003551034.1| PREDICTED: uncharacterized membrane protein ...    94   9e-18
ref|XP_002277444.1| PREDICTED: uncharacterized membrane protein ...    94   1e-17

>gb|AFK40944.1| unknown [Medicago truncatula]
          Length = 469

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 47/63 (74%), Positives = 53/63 (84%)
 Frame = -1

Query: 189 NSIKGSLNCLYVVFAFISALLLGALKGVIFGPIAALVLIIGNVGVILGLFPYHVAWTVYT 10
           NS++  +   YVVFAF SAL LGA+KG I GPIAAL+LIIGNVGVILGLFP HVAWTVYT
Sbjct: 6   NSLEDWIKVSYVVFAFFSALFLGAIKGFIVGPIAALILIIGNVGVILGLFPAHVAWTVYT 65

Query: 9   LVK 1
           L+K
Sbjct: 66  LLK 68


>ref|XP_003638735.1| Membrane protein, putative [Medicago truncatula]
           gi|355504670|gb|AES85873.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 532

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 47/63 (74%), Positives = 53/63 (84%)
 Frame = -1

Query: 189 NSIKGSLNCLYVVFAFISALLLGALKGVIFGPIAALVLIIGNVGVILGLFPYHVAWTVYT 10
           NS++  +   YVVFAF SAL LGA+KG I GPIAAL+LIIGNVGVILGLFP HVAWTVYT
Sbjct: 6   NSLEDWIKVSYVVFAFFSALFLGAIKGFIVGPIAALILIIGNVGVILGLFPAHVAWTVYT 65

Query: 9   LVK 1
           L+K
Sbjct: 66  LLK 68


>ref|XP_003638145.1| Membrane protein, putative [Medicago truncatula]
           gi|358349418|ref|XP_003638734.1| Membrane protein,
           putative [Medicago truncatula]
           gi|355504080|gb|AES85283.1| Membrane protein, putative
           [Medicago truncatula] gi|355504669|gb|AES85872.1|
           Membrane protein, putative [Medicago truncatula]
          Length = 597

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 47/63 (74%), Positives = 53/63 (84%)
 Frame = -1

Query: 189 NSIKGSLNCLYVVFAFISALLLGALKGVIFGPIAALVLIIGNVGVILGLFPYHVAWTVYT 10
           NS++  +   YVVFAF SAL LGA+KG I GPIAAL+LIIGNVGVILGLFP HVAWTVYT
Sbjct: 6   NSLEDWIKVSYVVFAFFSALFLGAIKGFIVGPIAALILIIGNVGVILGLFPAHVAWTVYT 65

Query: 9   LVK 1
           L+K
Sbjct: 66  LLK 68


>ref|XP_003551034.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Glycine
           max]
          Length = 594

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 44/63 (69%), Positives = 53/63 (84%)
 Frame = -1

Query: 189 NSIKGSLNCLYVVFAFISALLLGALKGVIFGPIAALVLIIGNVGVILGLFPYHVAWTVYT 10
           +S++G +  LYVVF F  A  LGALKG++ GPIAAL+LIIGNVGVILGLFP HVAWT+YT
Sbjct: 5   SSMEGWMKALYVVFVFFYAFFLGALKGIVVGPIAALILIIGNVGVILGLFPAHVAWTLYT 64

Query: 9   LVK 1
           L+K
Sbjct: 65  LLK 67


>ref|XP_002277444.1| PREDICTED: uncharacterized membrane protein At3g27390 [Vitis
           vinifera] gi|296082433|emb|CBI21438.3| unnamed protein
           product [Vitis vinifera]
          Length = 559

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/65 (67%), Positives = 54/65 (83%)
 Frame = -1

Query: 195 MLNSIKGSLNCLYVVFAFISALLLGALKGVIFGPIAALVLIIGNVGVILGLFPYHVAWTV 16
           M +++K  L  +YV+FAF SA  LGALKG++ GPIA L++IIGNVGVILGLFP+HV WTV
Sbjct: 1   MESTLKDWLKIVYVIFAFCSAFSLGALKGMLVGPIAGLIIIIGNVGVILGLFPFHVTWTV 60

Query: 15  YTLVK 1
           YTLVK
Sbjct: 61  YTLVK 65


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