BLASTX nr result

ID: Coptis24_contig00016926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016926
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279055.2| PREDICTED: uncharacterized protein LOC100263...   176   2e-42
emb|CBI15946.3| unnamed protein product [Vitis vinifera]              176   2e-42
ref|XP_002527824.1| structural constituent of ribosome, putative...   169   3e-40
ref|XP_002528843.1| structural constituent of ribosome, putative...   167   1e-39
ref|XP_004143160.1| PREDICTED: uncharacterized protein LOC101213...   152   3e-35

>ref|XP_002279055.2| PREDICTED: uncharacterized protein LOC100263805 [Vitis vinifera]
          Length = 273

 Score =  176 bits (447), Expect = 2e-42
 Identities = 99/172 (57%), Positives = 121/172 (70%), Gaps = 4/172 (2%)
 Frame = -1

Query: 505 NNKTTESNSFDSAESLEKMIF---SGNNQENNPFYQKLDDLEKARRRTGFGSNWTVRNSG 335
           N+   + NSF+SA+  E  IF   SG+N  ++ FYQKLD LEKA      GS      SG
Sbjct: 37  NDDNQKKNSFESADDFEHRIFAGTSGSNPNSDSFYQKLDRLEKAHDIYRLGSKPN-GGSG 95

Query: 334 GAFSDSLLDDPSTTLSDEMDGKLKKAAKYFDFDNDEVTQEDYSFRPDVRFRGGTTYDIKD 155
             F D L D+   TLSD MDGKLKK A YF+F+ DE+ QEDY+FRPDV F+ G TY+ KD
Sbjct: 96  SQFLDGL-DESFNTLSDGMDGKLKKEATYFEFNPDEIDQEDYAFRPDVAFKPGMTYEPKD 154

Query: 154 LDLTKPA-TGNFVGQEFEVTTEEVLRKADFRNVKFLSNFLTEAGIVIKRSQT 2
           LDLTKP    ++   EFEVTTEEVLRKADFRNV+FL++F+TEAGI+IKRS+T
Sbjct: 155 LDLTKPGIRKSYKRPEFEVTTEEVLRKADFRNVRFLAHFITEAGIIIKRSKT 206


>emb|CBI15946.3| unnamed protein product [Vitis vinifera]
          Length = 322

 Score =  176 bits (447), Expect = 2e-42
 Identities = 99/172 (57%), Positives = 121/172 (70%), Gaps = 4/172 (2%)
 Frame = -1

Query: 505 NNKTTESNSFDSAESLEKMIF---SGNNQENNPFYQKLDDLEKARRRTGFGSNWTVRNSG 335
           N+   + NSF+SA+  E  IF   SG+N  ++ FYQKLD LEKA      GS      SG
Sbjct: 86  NDDNQKKNSFESADDFEHRIFAGTSGSNPNSDSFYQKLDRLEKAHDIYRLGSKPN-GGSG 144

Query: 334 GAFSDSLLDDPSTTLSDEMDGKLKKAAKYFDFDNDEVTQEDYSFRPDVRFRGGTTYDIKD 155
             F D L D+   TLSD MDGKLKK A YF+F+ DE+ QEDY+FRPDV F+ G TY+ KD
Sbjct: 145 SQFLDGL-DESFNTLSDGMDGKLKKEATYFEFNPDEIDQEDYAFRPDVAFKPGMTYEPKD 203

Query: 154 LDLTKPA-TGNFVGQEFEVTTEEVLRKADFRNVKFLSNFLTEAGIVIKRSQT 2
           LDLTKP    ++   EFEVTTEEVLRKADFRNV+FL++F+TEAGI+IKRS+T
Sbjct: 204 LDLTKPGIRKSYKRPEFEVTTEEVLRKADFRNVRFLAHFITEAGIIIKRSKT 255


>ref|XP_002527824.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223532748|gb|EEF34527.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 258

 Score =  169 bits (429), Expect = 3e-40
 Identities = 92/167 (55%), Positives = 119/167 (71%), Gaps = 1/167 (0%)
 Frame = -1

Query: 499 KTTESNSFDSAESLEKMIFSGNNQENNPFYQKLDDLEKARRRTGFGSNWTVRNSGGAFSD 320
           K   SN+ +S +  E+ IF G ++ + PF+QKLD +EKAR R G   N  + ++     D
Sbjct: 32  KKDSSNTLESNDEFEQRIFGGISENSLPFFQKLDRIEKARDRPGSRMNEGISSN----LD 87

Query: 319 SLLDDPSTTLSDEMDGKLKKAAKYFDFDNDEVTQEDYSFRPDVRFRGGTTYDIKDLDLTK 140
            L ++   TLSD MDGKLKKAA+YF+FD +E+T+EDY+FRPD+ FR G TYD KDLDL K
Sbjct: 88  GLYEN---TLSDGMDGKLKKAARYFEFDPEEITKEDYAFRPDMTFRHGMTYDTKDLDLRK 144

Query: 139 PATGNFVGQ-EFEVTTEEVLRKADFRNVKFLSNFLTEAGIVIKRSQT 2
           P       + EF+VTTEEVL KADFRNV+FLSNF+TEAGI+ KRS+T
Sbjct: 145 PGVRKPPKRYEFQVTTEEVLEKADFRNVRFLSNFITEAGIMHKRSKT 191


>ref|XP_002528843.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223531694|gb|EEF33517.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 271

 Score =  167 bits (423), Expect = 1e-39
 Identities = 91/170 (53%), Positives = 119/170 (70%), Gaps = 1/170 (0%)
 Frame = -1

Query: 508 TNNKTTESNSFDSAESLEKMIFSGNNQENNPFYQKLDDLEKARRRTGFGSNWTVRNSGGA 329
           ++ K   SN+ +S    E+ IF G ++ + PF+QKLD +EKAR R G   N  + ++   
Sbjct: 42  SHGKKDSSNTLESNNEFEQRIFGGISENSLPFFQKLDRIEKARNRPGSRMNEGISSN--- 98

Query: 328 FSDSLLDDPSTTLSDEMDGKLKKAAKYFDFDNDEVTQEDYSFRPDVRFRGGTTYDIKDLD 149
             D L ++   TLSD MDGKLKKAA+YF+FD +E+T+EDY+FRPD+ FR G TYD KDLD
Sbjct: 99  -LDGLYEN---TLSDGMDGKLKKAARYFEFDPEEITKEDYAFRPDMTFRRGMTYDTKDLD 154

Query: 148 LTKPATGNFVGQ-EFEVTTEEVLRKADFRNVKFLSNFLTEAGIVIKRSQT 2
           L KP       + EF+VTTEEVL KAD RNV+FLSNF+TEAGI+ KRS+T
Sbjct: 155 LRKPGVRKPPKRYEFQVTTEEVLEKADSRNVRFLSNFITEAGIMHKRSKT 204


>ref|XP_004143160.1| PREDICTED: uncharacterized protein LOC101213524 [Cucumis sativus]
           gi|449496565|ref|XP_004160167.1| PREDICTED:
           uncharacterized LOC101213524 [Cucumis sativus]
          Length = 273

 Score =  152 bits (385), Expect = 3e-35
 Identities = 88/176 (50%), Positives = 116/176 (65%), Gaps = 6/176 (3%)
 Frame = -1

Query: 511 FTNNKTTESNSFDSAESLEKMIFSGNNQE---NNPFYQKLDDLEKARRRTGFGSNWTVRN 341
           F ++   + +SF++A+  E+ IF G +     N+ F+QK D L K R R G       + 
Sbjct: 38  FDDDNKGKFDSFETADDFERRIFGGGSMVDSGNDAFFQKFDRLGKPRERIGS------KL 91

Query: 340 SGGAFSDSLLD--DPSTTLSDEMDGKLKKAAKYFDFDNDEVTQEDYSFRPDVRFRGGTTY 167
           SGG    +L D  D   TLSD MDGKLKKA+ YF FD +E+ ++DY+FR D+ F  G+TY
Sbjct: 92  SGGNNFHALYDREDNFDTLSDGMDGKLKKASTYFKFDPEEIEKDDYTFRADMSFSPGSTY 151

Query: 166 DIKDLDLTKPATGNFVGQ-EFEVTTEEVLRKADFRNVKFLSNFLTEAGIVIKRSQT 2
           +IKDLDLTKP       + EF+VTTEE LRKADFRNV+FL+NF+TEAGI+ KRS T
Sbjct: 152 NIKDLDLTKPGFRKPPKRVEFQVTTEEALRKADFRNVRFLANFITEAGIINKRSNT 207


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