BLASTX nr result

ID: Coptis24_contig00016922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016922
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164520.1| PREDICTED: LOW QUALITY PROTEIN: tuftelin-int...    73   3e-11
ref|XP_004151854.1| PREDICTED: tuftelin-interacting protein 11-l...    73   3e-11
ref|XP_003548069.1| PREDICTED: tuftelin-interacting protein 11-l...    72   5e-11
ref|XP_002524028.1| tuftelin interacting protein, putative [Rici...    71   1e-10
ref|XP_002319771.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>ref|XP_004164520.1| PREDICTED: LOW QUALITY PROTEIN: tuftelin-interacting protein
           11-like [Cucumis sativus]
          Length = 872

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 44/108 (40%), Positives = 54/108 (50%)
 Frame = +1

Query: 4   KKMENFGMENDYEEGQWIGGEXXXXXXXXXXXXXXXXXXVLFGVFADVTXXXXXXXXXXX 183
           ++ME FGMENDY++GQWIGGE                  V++GVFA  +           
Sbjct: 5   QEMERFGMENDYDDGQWIGGEFYYRKRKEKRSQTKED--VVYGVFATGSDSDSDGDGFSS 62

Query: 184 XXXXXXXXXXXXXXLSKPVNFVSTGTVMPNQEIDRNIQTSQKEDGDAE 327
                         L+KPVNFVSTGTVMPNQEIDR       +DGD +
Sbjct: 63  RKRRKDRDLSRKPDLTKPVNFVSTGTVMPNQEIDR-----ISKDGDTD 105


>ref|XP_004151854.1| PREDICTED: tuftelin-interacting protein 11-like [Cucumis sativus]
          Length = 871

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 44/108 (40%), Positives = 54/108 (50%)
 Frame = +1

Query: 4   KKMENFGMENDYEEGQWIGGEXXXXXXXXXXXXXXXXXXVLFGVFADVTXXXXXXXXXXX 183
           ++ME FGMENDY++GQWIGGE                  V++GVFA  +           
Sbjct: 5   QEMERFGMENDYDDGQWIGGEFYYRKRKEKRSQTKED--VVYGVFATGSDSDSDGDGFSS 62

Query: 184 XXXXXXXXXXXXXXLSKPVNFVSTGTVMPNQEIDRNIQTSQKEDGDAE 327
                         L+KPVNFVSTGTVMPNQEIDR       +DGD +
Sbjct: 63  RKRRKDRDLSRKPDLTKPVNFVSTGTVMPNQEIDR-----ISKDGDTD 105


>ref|XP_003548069.1| PREDICTED: tuftelin-interacting protein 11-like [Glycine max]
          Length = 862

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 44/105 (41%), Positives = 51/105 (48%)
 Frame = +1

Query: 4   KKMENFGMENDYEEGQWIGGEXXXXXXXXXXXXXXXXXXVLFGVFADVTXXXXXXXXXXX 183
           ++ME FGMENDYE GQWIGGE                  VL+GVFAD             
Sbjct: 5   QEMERFGMENDYEGGQWIGGEFYYKNRKEKRTQTKDD--VLYGVFAD----SDDNDDDDY 58

Query: 184 XXXXXXXXXXXXXXLSKPVNFVSTGTVMPNQEIDRNIQTSQKEDG 318
                         L+KPVNFVSTGT MPNQEID   +   ++DG
Sbjct: 59  PSRKRRKDFSKKPDLTKPVNFVSTGTFMPNQEIDNKSKEQDEKDG 103


>ref|XP_002524028.1| tuftelin interacting protein, putative [Ricinus communis]
           gi|223536755|gb|EEF38396.1| tuftelin interacting
           protein, putative [Ricinus communis]
          Length = 883

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 44/106 (41%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
 Frame = +1

Query: 4   KKMENFGMENDYEEGQWIGGEXXXXXXXXXXXXXXXXXXVLFGVFADVTXXXXXXXXXXX 183
           ++ME FGMEND+E+GQWI GE                  VL+GVFAD +           
Sbjct: 5   QEMERFGMENDFEDGQWINGE--FYYKNRKEKRKQTKDDVLYGVFADYSDSDDDYDGGSS 62

Query: 184 XXXXXXXXXXXXXXLSKPVNFVSTGTVMPNQEID--RNIQTSQKED 315
                         L+KPVNFVSTG VMPNQEID   N   S KE+
Sbjct: 63  RKRKKDRDFGRKADLTKPVNFVSTGKVMPNQEIDISNNNNDSLKEE 108


>ref|XP_002319771.1| predicted protein [Populus trichocarpa] gi|222858147|gb|EEE95694.1|
           predicted protein [Populus trichocarpa]
          Length = 845

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/103 (37%), Positives = 52/103 (50%)
 Frame = +1

Query: 4   KKMENFGMENDYEEGQWIGGEXXXXXXXXXXXXXXXXXXVLFGVFADVTXXXXXXXXXXX 183
           ++ME FGMEND+E+G++I GE                  VL+G+FAD             
Sbjct: 6   EEMERFGMENDFEDGRYINGEFYFKKQKEKRKQSKDD--VLYGIFADYDSDDDYVSSSRK 63

Query: 184 XXXXXXXXXXXXXXLSKPVNFVSTGTVMPNQEIDRNIQTSQKE 312
                         L+KPVNFVSTGTVMPNQEID+N++    +
Sbjct: 64  RRKDSRKAD-----LTKPVNFVSTGTVMPNQEIDKNLRDKNSD 101


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