BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016915
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_002880379.1| RNA recognition motif-containing protein [Ar...    86   4e-15
ref|XP_004165231.1| PREDICTED: RNA-binding protein 28-like, part...    85   7e-15
ref|XP_004148553.1| PREDICTED: RNA-binding protein 28-like [Cucu...    85   7e-15
emb|CBI38027.3| unnamed protein product [Vitis vinifera]               84   1e-14

>ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|222850181|gb|EEE87728.1|
           predicted protein [Populus trichocarpa]
          Length = 974

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 41/52 (78%), Positives = 48/52 (92%)
 Frame = +1

Query: 1   ETGLSKGFGFVKFTCKKDAETAIQKVNGQTFGRRPIAVDWAVPKKLFTAGAD 156
           ETGLSKGF FVKFTCK+DAE AIQK NGQ FG+RPIAVDWAVPKK++++GA+
Sbjct: 316 ETGLSKGFAFVKFTCKQDAENAIQKFNGQKFGKRPIAVDWAVPKKIYSSGAN 367


>ref|XP_002880379.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297326218|gb|EFH56638.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 39/52 (75%), Positives = 41/52 (78%)
 Frame = +1

Query: 1   ETGLSKGFGFVKFTCKKDAETAIQKVNGQTFGRRPIAVDWAVPKKLFTAGAD 156
           ETGL KGF FVKFTCKKDAE AIQ  NG  FG+RPIAVDWAVPK L+   AD
Sbjct: 349 ETGLPKGFAFVKFTCKKDAENAIQMFNGHMFGKRPIAVDWAVPKNLYNGAAD 400


>ref|XP_004165231.1| PREDICTED: RNA-binding protein 28-like, partial [Cucumis sativus]
          Length = 678

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 37/50 (74%), Positives = 46/50 (92%)
 Frame = +1

Query: 1   ETGLSKGFGFVKFTCKKDAETAIQKVNGQTFGRRPIAVDWAVPKKLFTAG 150
           +TGLSKGF FVKFTCK+DAE+AIQK NG+ FG+R IAVDWAVPKK++++G
Sbjct: 43  DTGLSKGFAFVKFTCKQDAESAIQKFNGKKFGQRTIAVDWAVPKKIYSSG 92


>ref|XP_004148553.1| PREDICTED: RNA-binding protein 28-like [Cucumis sativus]
          Length = 966

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 37/50 (74%), Positives = 46/50 (92%)
 Frame = +1

Query: 1   ETGLSKGFGFVKFTCKKDAETAIQKVNGQTFGRRPIAVDWAVPKKLFTAG 150
           +TGLSKGF FVKFTCK+DAE+AIQK NG+ FG+R IAVDWAVPKK++++G
Sbjct: 331 DTGLSKGFAFVKFTCKQDAESAIQKFNGKKFGQRTIAVDWAVPKKIYSSG 380


>emb|CBI38027.3| unnamed protein product [Vitis vinifera]
          Length = 918

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 38/54 (70%), Positives = 45/54 (83%)
 Frame = +1

Query: 1   ETGLSKGFGFVKFTCKKDAETAIQKVNGQTFGRRPIAVDWAVPKKLFTAGADTV 162
           ETGLS+GF FVKFT K+DAE AIQK NG+  G+RPIAVDWAVPKK++  GA+ V
Sbjct: 299 ETGLSRGFAFVKFTSKQDAENAIQKFNGEKIGKRPIAVDWAVPKKIYITGANPV 352