BLASTX nr result

ID: Coptis24_contig00016902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016902
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513919.1| conserved hypothetical protein [Ricinus comm...   155   2e-36
ref|XP_003547529.1| PREDICTED: uncharacterized protein LOC100806...   154   7e-36
ref|XP_003595368.1| Transmembrane protein [Medicago truncatula] ...   151   6e-35
ref|XP_002301052.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_002284150.2| PREDICTED: uncharacterized protein LOC100260...   149   2e-34

>ref|XP_002513919.1| conserved hypothetical protein [Ricinus communis]
           gi|223547005|gb|EEF48502.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 588

 Score =  155 bits (393), Expect = 2e-36
 Identities = 77/98 (78%), Positives = 83/98 (84%)
 Frame = -1

Query: 413 ALAIEKKSRRIEISLYCFARAIESFFTCMADVGLLPESNKLKRADVIVFSLSTAIIMHCY 234
           ALAIEKKSRRIEISLYC ARAIESFF+CMAD G LP+S   KRADV VFS+STAIIMHCY
Sbjct: 404 ALAIEKKSRRIEISLYCLARAIESFFSCMADAGYLPQSKNFKRADVAVFSISTAIIMHCY 463

Query: 233 AREREVFRSKYLNVLDWVFGVPLSTGDTPRASVVETSK 120
           A EREVFRSKYLNVLDWVFGVP    +TPRA  V++ K
Sbjct: 464 AMEREVFRSKYLNVLDWVFGVPPPPDETPRAKRVDSKK 501


>ref|XP_003547529.1| PREDICTED: uncharacterized protein LOC100806036 [Glycine max]
          Length = 678

 Score =  154 bits (389), Expect = 7e-36
 Identities = 75/90 (83%), Positives = 81/90 (90%)
 Frame = -1

Query: 413 ALAIEKKSRRIEISLYCFARAIESFFTCMADVGLLPESNKLKRADVIVFSLSTAIIMHCY 234
           ALAIEKKSRRIEISLYC ARAIESFFTC+AD G LP+S ++KRADV+VFSLSTAIIMHCY
Sbjct: 585 ALAIEKKSRRIEISLYCLARAIESFFTCIADAGYLPQSRRIKRADVVVFSLSTAIIMHCY 644

Query: 233 AREREVFRSKYLNVLDWVFGVPLSTGDTPR 144
           A EREVFRSKYLNVLDWVFGVP    +TPR
Sbjct: 645 AEEREVFRSKYLNVLDWVFGVPPPPCETPR 674


>ref|XP_003595368.1| Transmembrane protein [Medicago truncatula]
           gi|355484416|gb|AES65619.1| Transmembrane protein
           [Medicago truncatula]
          Length = 364

 Score =  151 bits (381), Expect = 6e-35
 Identities = 72/89 (80%), Positives = 81/89 (91%)
 Frame = -1

Query: 410 LAIEKKSRRIEISLYCFARAIESFFTCMADVGLLPESNKLKRADVIVFSLSTAIIMHCYA 231
           LAIEKKSRR+EISLYC ARAIESFFTC+AD G LP+S ++KRADV+VFSLSTAIIMHCYA
Sbjct: 272 LAIEKKSRRMEISLYCLARAIESFFTCIADAGYLPQSRRIKRADVVVFSLSTAIIMHCYA 331

Query: 230 REREVFRSKYLNVLDWVFGVPLSTGDTPR 144
           +ER+VFRSKYLNVLDWVFGVP    +TPR
Sbjct: 332 QERDVFRSKYLNVLDWVFGVPPPACETPR 360


>ref|XP_002301052.1| predicted protein [Populus trichocarpa] gi|222842778|gb|EEE80325.1|
           predicted protein [Populus trichocarpa]
          Length = 486

 Score =  150 bits (378), Expect = 1e-34
 Identities = 75/98 (76%), Positives = 82/98 (83%), Gaps = 1/98 (1%)
 Frame = -1

Query: 413 ALAIEKKSRRIEISLYCFARAIESFFTCMADVGLLPESNKLKRADVIVFSLSTAIIMHCY 234
           ALAIEKKSRRIEISLYCFARA+ESFF C  D G LPES  LKRADV++FS+STAIIMHCY
Sbjct: 389 ALAIEKKSRRIEISLYCFARAVESFFICTRDAGYLPESLNLKRADVVIFSISTAIIMHCY 448

Query: 233 AREREVFRSKYLNVLDWVFGVPLSTGDT-PRASVVETS 123
            +EREVFRSKYLNVLDWVFGVP   GDT PR   ++ S
Sbjct: 449 EQEREVFRSKYLNVLDWVFGVPRPPGDTSPRKDGLKAS 486


>ref|XP_002284150.2| PREDICTED: uncharacterized protein LOC100260863 [Vitis vinifera]
          Length = 483

 Score =  149 bits (377), Expect = 2e-34
 Identities = 73/90 (81%), Positives = 78/90 (86%)
 Frame = -1

Query: 413 ALAIEKKSRRIEISLYCFARAIESFFTCMADVGLLPESNKLKRADVIVFSLSTAIIMHCY 234
           ALAIEKKSRRIEISLYC +RAIESFFTCM D G L  S  LKRADV++FSLSTAIIMHCY
Sbjct: 390 ALAIEKKSRRIEISLYCLSRAIESFFTCMVDAGYLQPSKNLKRADVVIFSLSTAIIMHCY 449

Query: 233 AREREVFRSKYLNVLDWVFGVPLSTGDTPR 144
           A+EREVFRSKYLNVLDWVFGVP    +TPR
Sbjct: 450 AQEREVFRSKYLNVLDWVFGVPPPPDETPR 479


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