BLASTX nr result

ID: Coptis24_contig00016899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016899
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81560.1| hypothetical protein VITISV_009902 [Vitis vinifera]   196   4e-48
emb|CBI29409.3| unnamed protein product [Vitis vinifera]              191   1e-46
ref|XP_003635007.1| PREDICTED: ethylene-responsive transcription...   187   2e-45
ref|XP_003532270.1| PREDICTED: uncharacterized protein LOC100306...   180   3e-43
ref|XP_003552111.1| PREDICTED: ethylene-responsive transcription...   179   4e-43

>emb|CAN81560.1| hypothetical protein VITISV_009902 [Vitis vinifera]
          Length = 232

 Score =  196 bits (498), Expect = 4e-48
 Identities = 98/155 (63%), Positives = 115/155 (74%)
 Frame = +3

Query: 99  KEEQIQSYSGQEIXXXXXXXXXXIENQEPCIMRGVYFKNMKWQAAIKVDKKQIHLGTVGS 278
           KE+  + +SGQEI           ++QEPC+MRGVYFKNMKWQAAIKVDKKQIHLGTVGS
Sbjct: 78  KEQHSKPFSGQEIKRRKRHRRKHFQDQEPCVMRGVYFKNMKWQAAIKVDKKQIHLGTVGS 137

Query: 279 QVEAAHLYDRAAFMCGREPNFLLSEEEKQELRKISWDDFLTMTRSAINNKKHQKRLRAGS 458
           Q EAAHLYDRAAFMCGREPNF L EEEK ELR+  W++FL MTR AI NKKH++RL AG 
Sbjct: 138 QEEAAHLYDRAAFMCGREPNFELPEEEKDELRQFKWEEFLAMTRHAITNKKHKRRLGAGL 197

Query: 459 KRNHEAILQSVKWNGVQGKHNIFALEDVELETSAS 563
           +++ E   Q+    G QG +   A EDVE +TSAS
Sbjct: 198 QKHSEPPQQNSDVEGEQGTNGFSASEDVEPDTSAS 232


>emb|CBI29409.3| unnamed protein product [Vitis vinifera]
          Length = 157

 Score =  191 bits (486), Expect = 1e-46
 Identities = 97/152 (63%), Positives = 112/152 (73%)
 Frame = +3

Query: 108 QIQSYSGQEIXXXXXXXXXXIENQEPCIMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQVE 287
           QI  + GQEI           ++QEPC+MRGVYFKNMKWQAAIKVDKKQIHLGTVGSQ E
Sbjct: 6   QIFIFVGQEIKRRKRHRRKHFQDQEPCVMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEE 65

Query: 288 AAHLYDRAAFMCGREPNFLLSEEEKQELRKISWDDFLTMTRSAINNKKHQKRLRAGSKRN 467
           AAHLYDRAAFMCGREPNF L EEEK ELR+  W++FL MTR AI NKKH++RL AG +++
Sbjct: 66  AAHLYDRAAFMCGREPNFELPEEEKDELRQFKWEEFLAMTRHAITNKKHKRRLGAGLQKH 125

Query: 468 HEAILQSVKWNGVQGKHNIFALEDVELETSAS 563
            E   Q+    G QG +   A EDVE +TSAS
Sbjct: 126 SEPPQQNSDVEGEQGTNGFSASEDVEPDTSAS 157


>ref|XP_003635007.1| PREDICTED: ethylene-responsive transcription factor-like protein
           At4g13040-like, partial [Vitis vinifera]
          Length = 145

 Score =  187 bits (475), Expect = 2e-45
 Identities = 94/145 (64%), Positives = 108/145 (74%)
 Frame = +3

Query: 129 QEIXXXXXXXXXXIENQEPCIMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQVEAAHLYDR 308
           QEI           ++QEPC+MRGVYFKNMKWQAAIKVDKKQIHLGTVGSQ EAAHLYDR
Sbjct: 1   QEIKRRKRHRRKHFQDQEPCVMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDR 60

Query: 309 AAFMCGREPNFLLSEEEKQELRKISWDDFLTMTRSAINNKKHQKRLRAGSKRNHEAILQS 488
           AAFMCGREPNF L EEEK ELR+  W++FL MTR AI NKKH++RL AG +++ E   Q+
Sbjct: 61  AAFMCGREPNFELPEEEKDELRQFKWEEFLAMTRHAITNKKHKRRLGAGLQKHSEPPQQN 120

Query: 489 VKWNGVQGKHNIFALEDVELETSAS 563
               G QG +   A EDVE +TSAS
Sbjct: 121 SDVEGEQGTNGFSASEDVEPDTSAS 145


>ref|XP_003532270.1| PREDICTED: uncharacterized protein LOC100306701 [Glycine max]
          Length = 228

 Score =  180 bits (457), Expect = 3e-43
 Identities = 93/156 (59%), Positives = 107/156 (68%), Gaps = 1/156 (0%)
 Frame = +3

Query: 99  KEEQIQSYSGQEIXXXXXXXXXXIENQEPCIMRGVYFKNMKWQAAIKVDKKQIHLGTVGS 278
           KE+ IQ  +G  I          + NQE CIMRGVYFKNMKWQAAIKVDKKQIHLGT+GS
Sbjct: 78  KEQLIQQITGPPIKRRKRHRRKNLHNQEQCIMRGVYFKNMKWQAAIKVDKKQIHLGTLGS 137

Query: 279 QVEAAHLYDRAAFMCGREPNFLLSEEEKQELRKISWDDFLTMTRSAINNKKHQKRLRAGS 458
           Q EAAHLYDRAAFMCGREPNF L EEEK++L K  WD+FL MTR AI  KKH++RL  G 
Sbjct: 138 QEEAAHLYDRAAFMCGREPNFELPEEEKRDLSKFKWDEFLAMTRQAITRKKHKRRLSPGP 197

Query: 459 KRNHEAI-LQSVKWNGVQGKHNIFALEDVELETSAS 563
             +H+ + L    W+  QG      +ED E ETS S
Sbjct: 198 GNSHDMLPLSKDDWDTKQG-----VIEDAEQETSVS 228


>ref|XP_003552111.1| PREDICTED: ethylene-responsive transcription factor-like protein
           At4g13040-like [Glycine max]
          Length = 228

 Score =  179 bits (455), Expect = 4e-43
 Identities = 92/156 (58%), Positives = 105/156 (67%), Gaps = 1/156 (0%)
 Frame = +3

Query: 99  KEEQIQSYSGQEIXXXXXXXXXXIENQEPCIMRGVYFKNMKWQAAIKVDKKQIHLGTVGS 278
           KE+ IQ  +G  I          + NQE C+MRGVYFKNMKWQAAIKVDKKQIHLGTVGS
Sbjct: 78  KEQLIQQITGPPIKRRKRHRRKNLHNQEQCVMRGVYFKNMKWQAAIKVDKKQIHLGTVGS 137

Query: 279 QVEAAHLYDRAAFMCGREPNFLLSEEEKQELRKISWDDFLTMTRSAINNKKHQKRLRAGS 458
           Q EAAHLYDRAAFMCGREPNF L E+EK+EL K  WD+FL MTR AI  KKH++RL  G 
Sbjct: 138 QEEAAHLYDRAAFMCGREPNFELPEDEKRELSKFKWDEFLAMTRQAITRKKHKRRLSPGP 197

Query: 459 KRNHEAI-LQSVKWNGVQGKHNIFALEDVELETSAS 563
              H+ + L    W+  QG      +ED E ET  S
Sbjct: 198 DNGHDILPLPKDDWDSKQG-----VIEDAEQETPVS 228


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