BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016881
         (998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat...   439   e-121
ref|XP_002322703.1| predicted protein [Populus trichocarpa] gi|2...   432   e-119
ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vit...   429   e-118
ref|XP_003625160.1| Pentatricopeptide repeat-containing protein ...   420   e-115
ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat...   414   e-113

>ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g52630-like [Glycine max]
          Length = 582

 Score =  439 bits (1129), Expect = e-121
 Identities = 210/290 (72%), Positives = 246/290 (84%)
 Frame = +1

Query: 1    TQKVFYLFDQIERVRLRPNFITFLGVMLVCSHAGMVEKGQFFFELMKKYMIEPGAQHYAC 180
            T + F LF+++ERV ++PNFITFL ++  CSHAG+VEKG+  F LMK++ IEPG+QHYA 
Sbjct: 293  TGRTFELFEEMERVGVKPNFITFLCLLYACSHAGLVEKGEHCFGLMKEHGIEPGSQHYAT 352

Query: 181  LVDLLGRAGKLQEALSVIKEMPMQPTESVWGALMTGCRIHGNTELAAFAADKVFELGTVS 360
            LVDLLGRAGKL+EA+ VIKEMPMQPTESVWGAL+TGCRIHGNTELA+F ADKVFE+G VS
Sbjct: 353  LVDLLGRAGKLEEAVLVIKEMPMQPTESVWGALLTGCRIHGNTELASFVADKVFEMGAVS 412

Query: 361  SGMHVLLSNXXXXXXXXXXXXXXRKMLKDQGVKKETGLSWVEEGNRVNTFAAGDRTHPKS 540
            SG+ VLLSN              RKM++DQG+KKETGLSWVEEGNRV+TFAAGDR+H K+
Sbjct: 413  SGIQVLLSNAYAAAGRWEEAARARKMMRDQGIKKETGLSWVEEGNRVHTFAAGDRSHGKT 472

Query: 541  KQIFEKLEEIGEEMEQAGYIADTSFVLKEVGAEEKKQTIGYHSEKLAIAFGLITFPCERP 720
            ++I+EKLEE+GEEM +AGY+ADTSFVLKEV  +EK QTI YHSE+LAIAFGLITFP E P
Sbjct: 473  REIYEKLEELGEEMAKAGYVADTSFVLKEVDGDEKSQTIRYHSERLAIAFGLITFPPEWP 532

Query: 721  IRVMKNLRVCGDCHNWIKFVSKCTERTIIVRDNNRFHRFDGGTCSCGDYW 870
            IRVMKNLRVCGDCH  IKF+SKCT R IIVRDNNRFHRF+ G C+CGDYW
Sbjct: 533  IRVMKNLRVCGDCHTAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGDYW 582


>ref|XP_002322703.1| predicted protein [Populus trichocarpa] gi|222867333|gb|EEF04464.1|
            predicted protein [Populus trichocarpa]
          Length = 627

 Score =  432 bits (1110), Expect = e-119
 Identities = 206/290 (71%), Positives = 242/290 (83%)
 Frame = +1

Query: 1    TQKVFYLFDQIERVRLRPNFITFLGVMLVCSHAGMVEKGQFFFELMKKYMIEPGAQHYAC 180
            T++ F LF ++E   +RPNFITFL V+  CSHAG+VE+G+ +F LMKKY IEPG QHYA 
Sbjct: 338  TKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYAS 397

Query: 181  LVDLLGRAGKLQEALSVIKEMPMQPTESVWGALMTGCRIHGNTELAAFAADKVFELGTVS 360
            +VDLLGRAGKLQEALSVIK MP +PTESVWGA +TGCRIHGNT+LAAFAADKVFELG VS
Sbjct: 398  MVDLLGRAGKLQEALSVIKGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAVS 457

Query: 361  SGMHVLLSNXXXXXXXXXXXXXXRKMLKDQGVKKETGLSWVEEGNRVNTFAAGDRTHPKS 540
            SG+HV+LSN              RKML+D+GVKKETGLSW+EEGNRV+ FAAGDR H + 
Sbjct: 458  SGLHVMLSNAYAAAGRYEDAAKARKMLRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRM 517

Query: 541  KQIFEKLEEIGEEMEQAGYIADTSFVLKEVGAEEKKQTIGYHSEKLAIAFGLITFPCERP 720
            K+I++KLE++GEEME+AGY+ADTSFVL+EVG+EEK QTI YHSE+LAIAFGLI+ P  RP
Sbjct: 518  KEIYQKLEDLGEEMERAGYVADTSFVLREVGSEEKNQTIRYHSERLAIAFGLISIPLGRP 577

Query: 721  IRVMKNLRVCGDCHNWIKFVSKCTERTIIVRDNNRFHRFDGGTCSCGDYW 870
            IR+MKNLRVCGDCHN IKF+SK + R IIVRDNNRFHRF+ G CSC DYW
Sbjct: 578  IRIMKNLRVCGDCHNAIKFISKLSGRVIIVRDNNRFHRFEDGKCSCADYW 627


>ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
          Length = 977

 Score =  429 bits (1104), Expect = e-118
 Identities = 209/290 (72%), Positives = 242/290 (83%)
 Frame = +1

Query: 1    TQKVFYLFDQIERVRLRPNFITFLGVMLVCSHAGMVEKGQFFFELMKKYMIEPGAQHYAC 180
            T+K F LF Q+E V ++PNFITFL V+  CSHAG+VEKGQF+FELMK+Y IEPGAQHYA 
Sbjct: 193  TEKAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQFYFELMKEYGIEPGAQHYAS 252

Query: 181  LVDLLGRAGKLQEALSVIKEMPMQPTESVWGALMTGCRIHGNTELAAFAADKVFELGTVS 360
            +VDLLGRAGKL++A+S+IK+MPM+PTESVWGAL+TGCRIHG+TELA+F AD+VFELG VS
Sbjct: 253  MVDLLGRAGKLKDAVSIIKKMPMEPTESVWGALLTGCRIHGDTELASFVADRVFELGPVS 312

Query: 361  SGMHVLLSNXXXXXXXXXXXXXXRKMLKDQGVKKETGLSWVEEGNRVNTFAAGDRTHPKS 540
            S                      RKML+DQGVKKETGLSWVEEGNR++TFAAGDR+HP +
Sbjct: 313  SAA-----------GRYEEAARARKMLRDQGVKKETGLSWVEEGNRIHTFAAGDRSHPYT 361

Query: 541  KQIFEKLEEIGEEMEQAGYIADTSFVLKEVGAEEKKQTIGYHSEKLAIAFGLITFPCERP 720
            K I++KLEE+GEEME+AGYIADTSFVL+EV  EEK QTI YHSE+LAIAFGLI+FP ERP
Sbjct: 362  KDIYKKLEELGEEMERAGYIADTSFVLQEVDGEEKNQTIRYHSERLAIAFGLISFPPERP 421

Query: 721  IRVMKNLRVCGDCHNWIKFVSKCTERTIIVRDNNRFHRFDGGTCSCGDYW 870
            IRVMKNLRVCGDCH  IKF+SKC  RTIIVRDNNRFHRF+ G CSC DYW
Sbjct: 422  IRVMKNLRVCGDCHTAIKFMSKCCGRTIIVRDNNRFHRFEDGNCSCRDYW 471


>ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|124360204|gb|ABN08217.1| Tetratricopeptide-like
            helical [Medicago truncatula] gi|355500175|gb|AES81378.1|
            Pentatricopeptide repeat-containing protein [Medicago
            truncatula]
          Length = 596

 Score =  420 bits (1080), Expect = e-115
 Identities = 196/291 (67%), Positives = 244/291 (83%), Gaps = 1/291 (0%)
 Frame = +1

Query: 1    TQKVFYLFDQIERVR-LRPNFITFLGVMLVCSHAGMVEKGQFFFELMKKYMIEPGAQHYA 177
            T K F LFD+++ V  ++ NFITFL V+  CSHAG+VEKG+++FELMK Y IEPG QHY+
Sbjct: 306  TDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYS 365

Query: 178  CLVDLLGRAGKLQEALSVIKEMPMQPTESVWGALMTGCRIHGNTELAAFAADKVFELGTV 357
             +VDLLGRAGKL +A+ +I+EMPM+PTESVWGAL+TGCR+HGNT+LA++ AD+V ELG+V
Sbjct: 366  TMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRVSELGSV 425

Query: 358  SSGMHVLLSNXXXXXXXXXXXXXXRKMLKDQGVKKETGLSWVEEGNRVNTFAAGDRTHPK 537
            SSG+HV+LSN              RKM++D+G+KKETGLSWVEEGNR++TFAAGDR+H K
Sbjct: 426  SSGLHVMLSNAYAAAGRWEEAAKARKMMRDRGIKKETGLSWVEEGNRIHTFAAGDRSHAK 485

Query: 538  SKQIFEKLEEIGEEMEQAGYIADTSFVLKEVGAEEKKQTIGYHSEKLAIAFGLITFPCER 717
            S +I++KL+E+GEEM++AGY+ADTSFVLKEV  EEK ++I YHSE+LAIAFG ITFP  +
Sbjct: 486  SVEIYDKLDELGEEMDKAGYVADTSFVLKEVDGEEKSRSIRYHSERLAIAFGFITFPHGQ 545

Query: 718  PIRVMKNLRVCGDCHNWIKFVSKCTERTIIVRDNNRFHRFDGGTCSCGDYW 870
            PIRVMKNLRVCGDCH  IKF+SKCT R IIVRDNNRFHRF+ G C+CGDYW
Sbjct: 546  PIRVMKNLRVCGDCHTAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGDYW 596


>ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g52630-like [Cucumis sativus]
          Length = 598

 Score =  414 bits (1065), Expect = e-113
 Identities = 198/290 (68%), Positives = 238/290 (82%)
 Frame = +1

Query: 1    TQKVFYLFDQIERVRLRPNFITFLGVMLVCSHAGMVEKGQFFFELMKKYMIEPGAQHYAC 180
            TQ+VF LF+++  V ++PNFI+FL V+  CSHAG+VEKG+ +F LM+ Y IEP  +HYA 
Sbjct: 309  TQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYAS 368

Query: 181  LVDLLGRAGKLQEALSVIKEMPMQPTESVWGALMTGCRIHGNTELAAFAADKVFELGTVS 360
            LVDLLGRAGKLQEA+SVIK+MPM+PTESVWGAL+TGCRIH +TE+AAF AD++ E+ + S
Sbjct: 369  LVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSS 428

Query: 361  SGMHVLLSNXXXXXXXXXXXXXXRKMLKDQGVKKETGLSWVEEGNRVNTFAAGDRTHPKS 540
            SG+HVLLSN              RKML+D+GVKKETGLSWVEEGN+V+TF AGDR+H K 
Sbjct: 429  SGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKW 488

Query: 541  KQIFEKLEEIGEEMEQAGYIADTSFVLKEVGAEEKKQTIGYHSEKLAIAFGLITFPCERP 720
             +I+EKLEE+ EEME+AGY+ADTSFVL+ V  EEK +TI YHSE+LAIAFGLITFP  RP
Sbjct: 489  VEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRP 548

Query: 721  IRVMKNLRVCGDCHNWIKFVSKCTERTIIVRDNNRFHRFDGGTCSCGDYW 870
            IRVMKNLRVCGDCH  IKF+SKC  R +IVRDNNRFHRF+ G CSCGDYW
Sbjct: 549  IRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598