BLASTX nr result

ID: Coptis24_contig00016874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016874
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313750.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002305470.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
gb|ABK92849.1| unknown [Populus trichocarpa]                           62   6e-08
ref|XP_002270127.1| PREDICTED: uncharacterized protein LOC100245...    60   2e-07
ref|XP_003607087.1| hypothetical protein MTR_4g072130 [Medicago ...    60   2e-07

>ref|XP_002313750.1| predicted protein [Populus trichocarpa] gi|222850158|gb|EEE87705.1|
           predicted protein [Populus trichocarpa]
          Length = 55

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/32 (87%), Positives = 32/32 (100%)
 Frame = -1

Query: 468 MAPPPGPYSGTSSLALVARVSAFTIGVVYGSV 373
           MAPPPGPYSGTS+LALVARVSAF++G+VYGSV
Sbjct: 1   MAPPPGPYSGTSTLALVARVSAFSLGLVYGSV 32


>ref|XP_002305470.1| predicted protein [Populus trichocarpa] gi|222848434|gb|EEE85981.1|
           predicted protein [Populus trichocarpa]
          Length = 53

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/32 (87%), Positives = 32/32 (100%)
 Frame = -1

Query: 468 MAPPPGPYSGTSSLALVARVSAFTIGVVYGSV 373
           MAPPPGPYSGTS+LALVARVSAF++G+VYGSV
Sbjct: 1   MAPPPGPYSGTSTLALVARVSAFSLGLVYGSV 32


>gb|ABK92849.1| unknown [Populus trichocarpa]
          Length = 55

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/32 (87%), Positives = 32/32 (100%)
 Frame = -1

Query: 468 MAPPPGPYSGTSSLALVARVSAFTIGVVYGSV 373
           MAPPPGPYSGTS+LALVARVSAF++G+VYGSV
Sbjct: 1   MAPPPGPYSGTSTLALVARVSAFSLGLVYGSV 32


>ref|XP_002270127.1| PREDICTED: uncharacterized protein LOC100245319 [Vitis vinifera]
          Length = 53

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = -1

Query: 468 MAPPPGPYSGTSSLALVARVSAFTIGVVYGSV 373
           MAPPPGPYSGTS+LALVARVSAF+ G+VYGS+
Sbjct: 1   MAPPPGPYSGTSTLALVARVSAFSAGLVYGSI 32


>ref|XP_003607087.1| hypothetical protein MTR_4g072130 [Medicago truncatula]
           gi|355508142|gb|AES89284.1| hypothetical protein
           MTR_4g072130 [Medicago truncatula]
           gi|388495878|gb|AFK36005.1| unknown [Medicago
           truncatula]
          Length = 52

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = -1

Query: 468 MAPPPGPYSGTSSLALVARVSAFTIGVVYGSV 373
           MAPPPGPYSGTS+LALVAR SAF+ G+VYGS+
Sbjct: 1   MAPPPGPYSGTSTLALVARASAFSFGIVYGSI 32


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