BLASTX nr result
ID: Coptis24_contig00016851
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00016851
(777 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002318402.1| predicted protein [Populus trichocarpa] gi|2... 123 3e-47
ref|XP_002321435.1| predicted protein [Populus trichocarpa] gi|2... 121 3e-46
ref|XP_002457121.1| hypothetical protein SORBIDRAFT_03g001620 [S... 119 1e-45
gb|ACN28485.1| unknown [Zea mays] gi|413947764|gb|AFW80413.1| SF... 116 3e-45
ref|NP_001149679.1| SFT2 domain containing 2 [Zea mays] gi|19562... 116 4e-45
>ref|XP_002318402.1| predicted protein [Populus trichocarpa] gi|222859075|gb|EEE96622.1|
predicted protein [Populus trichocarpa]
Length = 161
Score = 123 bits (309), Expect(2) = 3e-47
Identities = 58/83 (69%), Positives = 73/83 (87%)
Frame = +2
Query: 230 AFLIGPGKQMRMMLDSARVYASSIYIGSVLLALICALLIHNKLLTLLAIIIEIGALVWYS 409
AFLIGPG+Q+ MM D AR+YA++IYIG ++LALICALLI++K+LT+ AII EI AL+WYS
Sbjct: 79 AFLIGPGRQLGMMFDPARIYATAIYIGCIVLALICALLINSKILTVFAIIFEICALIWYS 138
Query: 410 LSYIPFARRMVSELFVRVCDTEM 478
LS IPFARRMVS L +R+CDTE+
Sbjct: 139 LSSIPFARRMVSNLMIRLCDTEL 161
Score = 91.7 bits (226), Expect(2) = 3e-47
Identities = 46/77 (59%), Positives = 56/77 (72%)
Frame = +1
Query: 1 WRFGESLLGGGDGEPEENLLPDEADELCSLSPLQRIYAFGASMVVGLIFMLLSSIVLARP 180
W+ L G D E EE+ L +E+D LCSLSP QR+YAF AS+V GL M LS IV A+P
Sbjct: 2 WKLNH-FLSGDDEEREESFLEEESDGLCSLSPTQRMYAFAASLVAGLALMFLSLIVFAKP 60
Query: 181 LKFAILFTLGNVLAVGS 231
+K+A+LFT GNVLAVGS
Sbjct: 61 IKYALLFTFGNVLAVGS 77
>ref|XP_002321435.1| predicted protein [Populus trichocarpa] gi|222868431|gb|EEF05562.1|
predicted protein [Populus trichocarpa]
Length = 161
Score = 121 bits (304), Expect(2) = 3e-46
Identities = 58/83 (69%), Positives = 70/83 (84%)
Frame = +2
Query: 230 AFLIGPGKQMRMMLDSARVYASSIYIGSVLLALICALLIHNKLLTLLAIIIEIGALVWYS 409
AFLIGPG+Q+ MM D R+YA+ IYIG V+LALI ALLIH+K+LT+ AII EI AL+WY
Sbjct: 79 AFLIGPGRQLGMMFDPVRIYATVIYIGCVVLALIFALLIHSKILTVFAIIFEICALIWYG 138
Query: 410 LSYIPFARRMVSELFVRVCDTEM 478
LSYIPFARRMVS L +R+CDTE+
Sbjct: 139 LSYIPFARRMVSSLMIRLCDTEL 161
Score = 90.5 bits (223), Expect(2) = 3e-46
Identities = 45/77 (58%), Positives = 57/77 (74%)
Frame = +1
Query: 1 WRFGESLLGGGDGEPEENLLPDEADELCSLSPLQRIYAFGASMVVGLIFMLLSSIVLARP 180
W+ + + G DGE EE+ L +E+D + SLSP QR+YAF AS+ GLI M LS IV A+P
Sbjct: 2 WKLNQ-FIPGDDGEREESFLEEESDGIFSLSPTQRMYAFAASLAAGLILMFLSLIVFAKP 60
Query: 181 LKFAILFTLGNVLAVGS 231
+KFA+LFT GNVLAVGS
Sbjct: 61 IKFALLFTFGNVLAVGS 77
>ref|XP_002457121.1| hypothetical protein SORBIDRAFT_03g001620 [Sorghum bicolor]
gi|241929096|gb|EES02241.1| hypothetical protein
SORBIDRAFT_03g001620 [Sorghum bicolor]
Length = 166
Score = 119 bits (299), Expect(2) = 1e-45
Identities = 58/83 (69%), Positives = 72/83 (86%)
Frame = +2
Query: 230 AFLIGPGKQMRMMLDSARVYASSIYIGSVLLALICALLIHNKLLTLLAIIIEIGALVWYS 409
AF++GP KQ+RMM D R+YA++IY+G V+LALI AL IH+KLLTL+AII EI AL WYS
Sbjct: 84 AFVMGPQKQIRMMFDPVRLYATAIYVGCVVLALIFALWIHDKLLTLIAIICEICALFWYS 143
Query: 410 LSYIPFARRMVSELFVRVCDTEM 478
LSYIPFARRMVS+L V++CDTE+
Sbjct: 144 LSYIPFARRMVSDLMVKLCDTEL 166
Score = 90.1 bits (222), Expect(2) = 1e-45
Identities = 47/78 (60%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +1
Query: 4 RFGESLLGGGDGE--PEENLLPDEADELCSLSPLQRIYAFGASMVVGLIFMLLSSIVLAR 177
R SL+GG D E PE+++L D + LCSLSPLQRIYAF A +V GL M+LS IV R
Sbjct: 6 RLHRSLVGGDDDEDPPEDSILAD-TEGLCSLSPLQRIYAFAACLVAGLALMILSFIVFVR 64
Query: 178 PLKFAILFTLGNVLAVGS 231
P+KFA++FT GN+LAVGS
Sbjct: 65 PIKFAVMFTFGNILAVGS 82
>gb|ACN28485.1| unknown [Zea mays] gi|413947764|gb|AFW80413.1| SFT2 domain
containing 2 [Zea mays]
Length = 165
Score = 116 bits (290), Expect(2) = 3e-45
Identities = 55/83 (66%), Positives = 70/83 (84%)
Frame = +2
Query: 230 AFLIGPGKQMRMMLDSARVYASSIYIGSVLLALICALLIHNKLLTLLAIIIEIGALVWYS 409
AF++GP KQ+RMM D R+YA+++Y+G V+LALI AL IH+KLLTL+A+I EI AL WYS
Sbjct: 83 AFVMGPQKQLRMMFDPVRLYATAVYVGCVVLALIFALWIHDKLLTLIAVICEICALFWYS 142
Query: 410 LSYIPFARRMVSELFVRVCDTEM 478
LSYIP ARRMVS+L V+ CDTE+
Sbjct: 143 LSYIPLARRMVSDLMVKFCDTEL 165
Score = 92.4 bits (228), Expect(2) = 3e-45
Identities = 48/77 (62%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = +1
Query: 4 RFGESLLGGGD-GEPEENLLPDEADELCSLSPLQRIYAFGASMVVGLIFMLLSSIVLARP 180
R SL+GG D +PE+++L D D LCSLSPLQRIYAF A +V GL M+LS IV ARP
Sbjct: 6 RLHRSLVGGDDEDQPEDSILADTED-LCSLSPLQRIYAFAACLVAGLTLMILSFIVFARP 64
Query: 181 LKFAILFTLGNVLAVGS 231
+KFA++FT GN+LAVGS
Sbjct: 65 IKFAVMFTFGNILAVGS 81
>ref|NP_001149679.1| SFT2 domain containing 2 [Zea mays] gi|195629360|gb|ACG36321.1|
SFT2 domain containing 2 [Zea mays]
Length = 165
Score = 116 bits (290), Expect(2) = 4e-45
Identities = 55/83 (66%), Positives = 70/83 (84%)
Frame = +2
Query: 230 AFLIGPGKQMRMMLDSARVYASSIYIGSVLLALICALLIHNKLLTLLAIIIEIGALVWYS 409
AF++GP KQ+RMM D R+YA+++Y+G V+LALI AL IH+KLLTL+A+I EI AL WYS
Sbjct: 83 AFVMGPQKQLRMMFDPVRLYATAVYVGCVVLALIFALWIHDKLLTLIAVICEICALFWYS 142
Query: 410 LSYIPFARRMVSELFVRVCDTEM 478
LSYIP ARRMVS+L V+ CDTE+
Sbjct: 143 LSYIPLARRMVSDLMVKFCDTEL 165
Score = 92.0 bits (227), Expect(2) = 4e-45
Identities = 44/76 (57%), Positives = 57/76 (75%)
Frame = +1
Query: 4 RFGESLLGGGDGEPEENLLPDEADELCSLSPLQRIYAFGASMVVGLIFMLLSSIVLARPL 183
R SL+GG D + E+ + + ++LCSLSPLQRIYAF A +V GL M+LS IV ARP+
Sbjct: 6 RLHRSLVGGDDEDQSEDSILADTEDLCSLSPLQRIYAFAACLVAGLTLMILSFIVFARPI 65
Query: 184 KFAILFTLGNVLAVGS 231
KFA++FT GN+LAVGS
Sbjct: 66 KFAVMFTFGNILAVGS 81