BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016846
         (1759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vit...   218   4e-54
emb|CBI22513.3| unnamed protein product [Vitis vinifera]              202   2e-49
ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, puta...   174   9e-41
ref|NP_001119373.1| DNA repair protein REV1 [Arabidopsis thalian...   163   1e-37
ref|NP_199288.4| DNA repair protein REV1 [Arabidopsis thaliana] ...   163   1e-37

>ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vitis vinifera]
          Length = 1175

 Score =  218 bits (555), Expect = 4e-54
 Identities = 129/313 (41%), Positives = 181/313 (57%), Gaps = 28/313 (8%)
 Frame = +2

Query: 2    SDLLEKNEDKDNKISDSVCNLFRRDLEGERNKGKEPLSCHQVHFEKSGSKNEVH------ 163
            SD + K + K+  +S ++C       EG  N GK+ L C  V   K+  +N+V       
Sbjct: 864  SDFIRKRKGKNENVSGTMCTTSYEIYEGAINNGKQ-LHCSIVPIRKTPVENKVEKTLDRE 922

Query: 164  -----------------QRRPQEYHSASTSVAGSFNSHTTSMGEDQNGFMPTSLSQVDIS 292
                             Q +  E    S S A S N    +   +++  MP+SLSQVDIS
Sbjct: 923  IATENSLLQSSEVEKVKQYKIDEIQEVSVSGAVSLNVVDPASALEKSDLMPSSLSQVDIS 982

Query: 293  VLQQLPEELKVDILQLLPGHRRPECSDNC----LVECPHDKVKRENINDHLEEANSVSRN 460
            VLQQLP+E+ VDIL+ LP HR+PE S +     L+    + +  ++  ++ +  +SV  N
Sbjct: 983  VLQQLPKEMWVDILEQLPVHRKPEHSSSAALDPLIANAQESLCFKHTENNSKSVDSVLGN 1042

Query: 461  HLWIGCPPLWVDKFEVSNHLILNLLAEMYYRXXXXXXXXXXXQSTISAPTF-WEASNDPE 637
            +LWIG PP WVDKF+VSN L+LN+LAEMYYR           Q T+S      +AS+D  
Sbjct: 1043 NLWIGNPPQWVDKFKVSNCLLLNILAEMYYRSGSTGCLSSILQCTLSKFLLPLDASSDGW 1102

Query: 638  DDVISSVCSLLQQYIDLKIKSDMEEIYICFRLLRRLSIKSRFFLQVYEEVLPYVQVSFAE 817
            D+ ISS+C LL+QYI +KI+SD+EEIY+CFRLL+R ++KS+ FL+ Y  V PY+Q S  E
Sbjct: 1103 DETISSLCDLLKQYIKIKIESDIEEIYVCFRLLKRFTMKSKLFLEAYNVVFPYLQASAGE 1162

Query: 818  NYGGNLNA*HAKD 856
            NYGG+L   HAK+
Sbjct: 1163 NYGGSLQLSHAKE 1175


>emb|CBI22513.3| unnamed protein product [Vitis vinifera]
          Length = 1123

 Score =  202 bits (514), Expect = 2e-49
 Identities = 110/226 (48%), Positives = 151/226 (66%), Gaps = 5/226 (2%)
 Frame = +2

Query: 194  STSVAGSFNSHTTSMGEDQNGFMPTSLSQVDISVLQQLPEELKVDILQLLPGHRRPECSD 373
            S S A S N    +   +++  MP+SLSQVDISVLQQLP+E+ VDIL+ LP HR+PE S 
Sbjct: 898  SVSGAVSLNVVDPASALEKSDLMPSSLSQVDISVLQQLPKEMWVDILEQLPVHRKPEHSS 957

Query: 374  NC----LVECPHDKVKRENINDHLEEANSVSRNHLWIGCPPLWVDKFEVSNHLILNLLAE 541
            +     L+    + +  ++  ++ +  +SV  N+LWIG PP WVDKF+VSN L+LN+LAE
Sbjct: 958  SAALDPLIANAQESLCFKHTENNSKSVDSVLGNNLWIGNPPQWVDKFKVSNCLLLNILAE 1017

Query: 542  MYYRXXXXXXXXXXXQSTISAPTF-WEASNDPEDDVISSVCSLLQQYIDLKIKSDMEEIY 718
            MYYR           Q T+S      +AS+D  D+ ISS+C LL+QYI +KI+SD+EEIY
Sbjct: 1018 MYYRSGSTGCLSSILQCTLSKFLLPLDASSDGWDETISSLCDLLKQYIKIKIESDIEEIY 1077

Query: 719  ICFRLLRRLSIKSRFFLQVYEEVLPYVQVSFAENYGGNLNA*HAKD 856
            +CFRLL+R ++KS+ FL+ Y  V PY+Q S  ENYGG+L   HAK+
Sbjct: 1078 VCFRLLKRFTMKSKLFLEAYNVVFPYLQASAGENYGGSLQLSHAKE 1123


>ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, putative [Ricinus communis]
            gi|223542041|gb|EEF43585.1| terminal deoxycytidyl
            transferase rev1, putative [Ricinus communis]
          Length = 1200

 Score =  174 bits (440), Expect = 9e-41
 Identities = 105/222 (47%), Positives = 133/222 (59%), Gaps = 5/222 (2%)
 Frame = +2

Query: 188  SASTSVAGSFNSHTTSMGEDQNGFMPTSLSQVDISVLQQLPEELKVDILQLLPGHRRPEC 367
            +A +S   S +  T ++G      MP+SLSQVD SVLQQLP+ELK DIL LLP HRR E 
Sbjct: 887  AAPSSGFSSNDGSTHTLGLGNTDLMPSSLSQVDTSVLQQLPDELKADILGLLPAHRRLEL 946

Query: 368  SDNCLVECPHDKVKRENIN---DHLEEANSVSRNHLWIGCPPLWVDKFEVSNHLILNLLA 538
            + N  +  P  K  +E +    +      SV  N LWIG PP WVDKF+VSN LILN LA
Sbjct: 947  TSNSSM-VPLTKNPQELLGITENQTMPVASVLNNDLWIGNPPRWVDKFKVSNCLILNSLA 1005

Query: 539  EMYYRXXXXXXXXXXXQSTISAPTFWEASNDP--EDDVISSVCSLLQQYIDLKIKSDMEE 712
            EMY +           QSTIS        ND   +D+     C LL+QYI+LKI+ D+EE
Sbjct: 1006 EMYDKLGSADNLSSVLQSTISESINHPIENDDSWDDEAAYCFCELLKQYINLKIEFDIEE 1065

Query: 713  IYICFRLLRRLSIKSRFFLQVYEEVLPYVQVSFAENYGGNLN 838
            IY+CFRLLRR +  S+FFLQVY  V+PY+Q+ F   +   +N
Sbjct: 1066 IYVCFRLLRRFTKISKFFLQVYNIVIPYLQLIFFLKFQTGMN 1107


>ref|NP_001119373.1| DNA repair protein REV1 [Arabidopsis thaliana]
            gi|384950720|sp|A3EWL3.1|REV1_ARATH RecName: Full=DNA
            repair protein REV1; Short=AtREV1; AltName:
            Full=Rev1-like terminal deoxycytidyl transferase
            gi|125656400|gb|ABN48548.1| polymerase ATREV1-1105
            [Arabidopsis thaliana] gi|332007774|gb|AED95157.1| DNA
            repair protein REV1 [Arabidopsis thaliana]
          Length = 1105

 Score =  163 bits (413), Expect = 1e-37
 Identities = 98/274 (35%), Positives = 151/274 (55%), Gaps = 23/274 (8%)
 Frame = +2

Query: 86   ERNKGKEPLSCHQVHFEKSGSKNEVHQRRPQ--EYHSASTS--------------VAGSF 217
            E+ +GK  ++C+  H    G+   + + +    + H  STS              +A + 
Sbjct: 838  EKKRGKRRINCNSPHVSLDGTAASIKELKSLSVKIHGLSTSGEKEYKEPYVPHPSIARTS 897

Query: 218  NSHTTSMGEDQNGFMPTSLSQVDISVLQQLPEELKVDILQLLPGHRRPECSDNCLVECPH 397
            N HT  M +     +P+SLSQVD+SVLQ+LPEEL+ D+L   P HRR + S     + P 
Sbjct: 898  NQHTIEMTD----LLPSSLSQVDVSVLQELPEELRADVLGAFPSHRRQQSSS----DVPK 949

Query: 398  DKVKRENIND----HLEEANSVSRNHLWIGCPPLWVDKFEVSNHLILNLLAEMYYRXXXX 565
            +  K+++         E    +S + LW G PPLW +KF+VS +  +  L+ +Y++    
Sbjct: 950  ETCKKQDEEPIDLKGTENEIGLSFSSLWFGNPPLWTEKFKVSGNCTMEKLSAIYFKVAQS 1009

Query: 566  XXXXXXX-QSTISAPTFWE--ASNDPEDDVISSVCSLLQQYIDLKIKSDMEEIYICFRLL 736
                    Q  IS  + +   AS    D  I  VC LL+QYI+LK+  D+EEIY+CFRLL
Sbjct: 1010 RPMLSLVLQHAISEMSSFPDAASASDLDKAIYDVCELLKQYINLKVGGDIEEIYLCFRLL 1069

Query: 737  RRLSIKSRFFLQVYEEVLPYVQVSFAENYGGNLN 838
            +RL+ +S+ FLQVYE + P++Q S +E+YGG+L+
Sbjct: 1070 KRLAARSQLFLQVYEILSPFIQASISEHYGGSLS 1103


>ref|NP_199288.4| DNA repair protein REV1 [Arabidopsis thaliana]
            gi|59796995|dbj|BAD89586.1| deoxycytidyl transferase
            [Arabidopsis thaliana] gi|332007773|gb|AED95156.1| DNA
            repair protein REV1 [Arabidopsis thaliana]
          Length = 1101

 Score =  163 bits (413), Expect = 1e-37
 Identities = 98/274 (35%), Positives = 151/274 (55%), Gaps = 23/274 (8%)
 Frame = +2

Query: 86   ERNKGKEPLSCHQVHFEKSGSKNEVHQRRPQ--EYHSASTS--------------VAGSF 217
            E+ +GK  ++C+  H    G+   + + +    + H  STS              +A + 
Sbjct: 834  EKKRGKRRINCNSPHVSLDGTAASIKELKSLSVKIHGLSTSGEKEYKEPYVPHPSIARTS 893

Query: 218  NSHTTSMGEDQNGFMPTSLSQVDISVLQQLPEELKVDILQLLPGHRRPECSDNCLVECPH 397
            N HT  M +     +P+SLSQVD+SVLQ+LPEEL+ D+L   P HRR + S     + P 
Sbjct: 894  NQHTIEMTD----LLPSSLSQVDVSVLQELPEELRADVLGAFPSHRRQQSSS----DVPK 945

Query: 398  DKVKRENIND----HLEEANSVSRNHLWIGCPPLWVDKFEVSNHLILNLLAEMYYRXXXX 565
            +  K+++         E    +S + LW G PPLW +KF+VS +  +  L+ +Y++    
Sbjct: 946  ETCKKQDEEPIDLKGTENEIGLSFSSLWFGNPPLWTEKFKVSGNCTMEKLSAIYFKVAQS 1005

Query: 566  XXXXXXX-QSTISAPTFWE--ASNDPEDDVISSVCSLLQQYIDLKIKSDMEEIYICFRLL 736
                    Q  IS  + +   AS    D  I  VC LL+QYI+LK+  D+EEIY+CFRLL
Sbjct: 1006 RPMLSLVLQHAISEMSSFPDAASASDLDKAIYDVCELLKQYINLKVGGDIEEIYLCFRLL 1065

Query: 737  RRLSIKSRFFLQVYEEVLPYVQVSFAENYGGNLN 838
            +RL+ +S+ FLQVYE + P++Q S +E+YGG+L+
Sbjct: 1066 KRLAARSQLFLQVYEILSPFIQASISEHYGGSLS 1099