BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016831
         (1380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-21
ref|XP_003616471.1| F-box/LRR-repeat protein [Medicago truncatul...    90   1e-15
ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|3554...    85   4e-14
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    82   4e-13
ref|XP_003616769.1| F-box/LRR-repeat protein [Medicago truncatul...    81   7e-13

>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
            predicted protein [Populus trichocarpa]
          Length = 460

 Score =  108 bits (270), Expect = 3e-21
 Identities = 93/317 (29%), Positives = 149/317 (47%), Gaps = 6/317 (1%)
 Frame = -1

Query: 1380 VNSWITTAVMRKAKELXXXXXXXXXXV--PRCLFTSESLTTLKIEMEHDLRMPSLINLPS 1207
            V +WI+ AV R  K+L             P CLF  E+LT L+I M + L++PS I+L  
Sbjct: 113  VGTWISAAVNRNVKDLYLELRDFEASFVLPHCLFNCETLTELEINMPYILKLPSSISLSC 172

Query: 1206 LKVLHLGHVCIYVDGDFQVSFRFPNLEELYLKECNWMEIDKANITAPALERLIIEDDPIC 1027
            LK+L+L  V    D   Q  F  PNL EL + ECNWM +   +I+AP L+ L I +    
Sbjct: 173  LKILNLYEVIFTDDHSTQQLFSLPNLVELEIHECNWMNLVAVSISAPKLQSLDIHEPCQS 232

Query: 1026 KNDGLHNCEIHIFAKSLISFKMKSNLSYQYYPHILSSLGDASVDVLHNLSSHSEEIDHRL 847
                L  C + IF   L  F +   LS  Y  +  SS+ +  + +  + +    +  +R 
Sbjct: 233  SPASLGGCHVRIFGTHLADFTIIGTLSNDYCLY-ESSVVETCISIF-SAADKPRQTAYRA 290

Query: 846  RNLLKVICNVRDLALSNHTIVALFRG-DLLSHLHKFFNSFHLTVIVEFNDGKRIGWTIRH 670
              LL+ I + + L L+ + +  L    +LL+   +F N   L    E ++    G+   H
Sbjct: 291  SKLLEGISSAQSLCLTTNVVDVLDDAPELLAFPLEFRNLTSLLFESEESNLHSDGFW--H 348

Query: 669  LIELLRHLPNIE--SLLLINTDGGCAFEKHFLIIETIPS-IARLKSIEIQNFHGSRHELN 499
            +I    HL  ++   + +      C   + + +  + P  ++ LK I++  F G   EL+
Sbjct: 349  IIYNSPHLIALQFYGVSMPKVPSNC--REDWTLDPSPPCFLSCLKFIQVGRFGGDEKELD 406

Query: 498  FLRILLKNARILEKLTI 448
             +  LLKNA  LE + I
Sbjct: 407  AVGFLLKNATALESMDI 423


>ref|XP_003616471.1| F-box/LRR-repeat protein [Medicago truncatula]
            gi|355517806|gb|AES99429.1| F-box/LRR-repeat protein
            [Medicago truncatula]
          Length = 459

 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 85/351 (24%), Positives = 144/351 (41%), Gaps = 13/351 (3%)
 Frame = -1

Query: 1380 VNSWITTAVMRKAKELXXXXXXXXXXVPRCLFTSESLTTLKIEMEHDLRMPSLINLPSLK 1201
            V+S ++ A  +K  E+          +P  L+T ++LT L++     L +PS ++LP LK
Sbjct: 123  VSSIVSMATTQKVYEIDLSLYRLKVYLPHQLYTCKTLTVLRLVGTFHLNVPSHLHLPLLK 182

Query: 1200 VLHLGHVCIYVDGDFQVSFRF----PNLEELYLKECNWMEIDKANITAPALERLIIEDDP 1033
            +LHL  +C   D D     RF    P LE+L+ +E  +       I  P+L+RL +    
Sbjct: 183  ILHLNLLCFVDDHDDDALMRFLSSCPALEQLFYEEVKFKRTSLFGICVPSLKRLFVRS-- 240

Query: 1032 ICKNDGLHNCEIHIFAKSLISFKMKSNLSYQYYPHILSSLGDASVDVLHNLSSHSEEIDH 853
                    +  +HI    L    MK   +  Y    L +L +A + +  +    ++++  
Sbjct: 241  -------FDERLHIKTPLLECLVMKETKAINYVVENLDNLKEAHIGI--HFDYENKKVKE 291

Query: 852  RLRNLLKVICNVRDLALSNHTIVALFRG-------DLLSHLHKFFNSFHLTVIVEFNDGK 694
             + N+   +   R L L  +T   L          D L HL  +        +VE     
Sbjct: 292  NIANIFNGVRKTRFLCLDLYTTEVLTYACLEFPTFDHLGHLQLYLKILDSYFLVEL---- 347

Query: 693  RIGWTIRHLIELLRHLPNIESLLLINTDGGCAFEKHFLIIETIPSI--ARLKSIEIQNFH 520
                       LL   PN+E L +I  D  C  E  +     +PS   + L +   +++ 
Sbjct: 348  -----------LLEKCPNLEFLEIIKVDELCDNEIEWRQPTIVPSCLSSHLTTFIFRDYE 396

Query: 519  GSRHELNFLRILLKNARILEKLTISIVSSLSANPLVQVDISRKLRMLSRGS 367
            G+  E   +  +L + ++L++ TI   SS   NP    D   +L  L R S
Sbjct: 397  GTDEEFELISYILNSGKVLKRTTIYFESS-CWNPSETSDAVLELSSLPRAS 446


>ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|355488922|gb|AES70125.1|
            F-box family-3 [Medicago truncatula]
          Length = 642

 Score = 85.1 bits (209), Expect = 4e-14
 Identities = 93/343 (27%), Positives = 157/343 (45%), Gaps = 11/343 (3%)
 Frame = -1

Query: 1380 VNSWITTAVMRKAK--ELXXXXXXXXXXVPRCLFTSESLTTLKIEMEHDLRMPSLINLPS 1207
            V+S I++A   K +  +L          +P      ESL  L++ ++  L +PS I  P 
Sbjct: 278  VSSIISSAANHKLQYLDLSLGDRNDNFVLPHSFPAFESLNELRLGLQFTLHIPSGICFPI 337

Query: 1206 LKVLHLGHVCIYVDGDFQVSFR-FPNLEELYLKECNWMEIDKANITAPALERLIIEDDPI 1030
            LK L + +V    +   Q  F   P L+EL L  C W  I++ +++   L +L I    +
Sbjct: 338  LKTLVVTNVTFANENSAQQLFSGCPVLQELELDNCYWEHINQISLSISTLRKLTISYLML 397

Query: 1029 CKNDGLHNCEIHIFAKSLISFKMKSNLSYQYYPHILSSLGDASVDVLHNLSSHSEEIDHR 850
            C  D  H  ++ I A +L+S     N   +  P  L+SL DA +  L  +  H E    +
Sbjct: 398  CV-DYDHIMKLKIDAVNLLSLYCICNPIIEVIPVNLTSLVDAFI-FLGYVYPHDEPYAAQ 455

Query: 849  LR-NLLKVICNVRDLALSNHTIVALFRGDLLSHLH-----KFFNSFHLTVIVEFNDGKRI 688
                LLK + +V+ L L++  +++ +      HLH      F+N  HL V          
Sbjct: 456  CSIELLKGLGSVKSLKLNDIILMSFYHTLDNLHLHLLPLPTFYNLTHLYVC-----SVSP 510

Query: 687  GWTIRHLIELLRHLPNIESLLLINTDGGCAFEKHFLIIETIPSIAR--LKSIEIQNFHGS 514
            G     ++++LR  P +E L +         +   LI+ ++P   +  LK +   NFHG+
Sbjct: 511  GNACALVMDILRKTPKLEDLTIPGVVLNY-LDSDDLILNSLPCCFKSSLKRLCFLNFHGN 569

Query: 513  RHELNFLRILLKNARILEKLTISIVSSLSANPLVQVDISRKLR 385
             HE+ F+  +L+NA  LE++ I     LSA+     D+  +L+
Sbjct: 570  VHEIKFVTFILENAPYLEEIKIHCSRHLSADMEKLDDVRNQLQ 612


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
            predicted protein [Populus trichocarpa]
          Length = 420

 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 91/318 (28%), Positives = 127/318 (39%), Gaps = 8/318 (2%)
 Frame = -1

Query: 1374 SWITTAVMRKAKELXXXXXXXXXXV----PRCLFTSESLTTLKIEMEHDLRMPSLINLPS 1207
            +W++ AV R  KEL               P CLFT  +LT LKI     LR+ S I+LP 
Sbjct: 127  TWVSAAVNRNVKELCVNFYEGGESESFVSPLCLFTCATLTKLKITSHGVLRLSSSISLPC 186

Query: 1206 LKVLHLGHVCIYVDGDFQVSFRFPNLEELYLKECNWMEIDKANITAPALERLIIEDDPIC 1027
            LK+L L HV    +   Q       LE+L +   +W  +    I+AP L  L I +  + 
Sbjct: 187  LKILSLQHVVFPDEDSTQQILNLRTLEKLKISYYDWKNLKAITISAPKLRSLDICE--MH 244

Query: 1026 KND--GLHNCEIHIFAKSLISFKMKSNLSYQYYPHILSSLGDASVDVLHNLSSHSEEIDH 853
            +ND  G   C + IF  +L  F         Y     SSL +A   V +     S EI H
Sbjct: 245  RNDLRGSDACHVMIFGTALTFFSFSGGFWDDYCLFKSSSLVEAYFHV-YGCYERSREIAH 303

Query: 852  RLRNLLKVICNVRDLALSNHTIVALFRGDLLSHLHKFFNSFHLTVIVEFNDGKRIGWTIR 673
            R    +  +  V+ L L+          D+L                             
Sbjct: 304  RAYKHIVGLSTVKHLTLT---------PDVLK---------------------------- 326

Query: 672  HLIELLRHLPNIESLLLINTDGGCAFEKHFLIIETIPSIAR--LKSIEIQNFHGSRHELN 499
              IEL   LP             CA  K   I+E +P   +  LK IEI++F G   EL+
Sbjct: 327  --IELSEELPT-----------NCA--KDDWILEPVPPCFQSCLKCIEIRDFGGLIDELD 371

Query: 498  FLRILLKNARILEKLTIS 445
             + +LLKNA  L+ + I+
Sbjct: 372  AVALLLKNAIALDDMVIT 389


>ref|XP_003616769.1| F-box/LRR-repeat protein [Medicago truncatula]
            gi|355518104|gb|AES99727.1| F-box/LRR-repeat protein
            [Medicago truncatula]
          Length = 436

 Score = 80.9 bits (198), Expect = 7e-13
 Identities = 80/326 (24%), Positives = 138/326 (42%), Gaps = 10/326 (3%)
 Frame = -1

Query: 1380 VNSWITTAVMRKAKELXXXXXXXXXXVPRCLFTSESLTTLKIEMEHDLRMPSLINLPSLK 1201
            V+S +  A  +K +E+          +P  +F  E+L  LK+     L +PS ++LP LK
Sbjct: 100  VSSIVCMASKQKVEEIDLSLYSLKVYLPCEIFACETLVVLKLVGRFYLNLPSHLHLPLLK 159

Query: 1200 VLHLGHVCIYVD-GDFQVSFRFPNLEELYLKECNWMEIDKANITAPALERLIIEDDPICK 1024
            +LHL   CI  D    ++ +  P LEELY ++  +       I  P L+RL +       
Sbjct: 160  ILHLCISCIVEDKALMKLFYGCPVLEELYYEDVEFKCSSLFGICVPTLKRLHVRS----- 214

Query: 1023 NDGLHNCEIHIFAKSLISFKMKSNLSYQYYPHILSSLGDASVDVLHNLSSHSEEIDHRLR 844
                 + +IHI    L    ++   +  Y    L+ L +A + +       ++E+   + 
Sbjct: 215  ----FDEKIHINTPLLEYLVLEETKASNYEVENLNKLKEARIGIY--FDHENKEVKQNIS 268

Query: 843  NLLKVICNVRDLALSNHTIVALFRGDL-------LSHLHKFFNSFHLTVIVEFNDGKRIG 685
            NLL  I   R L L   +   L    L       L +L  +  +F+   +V+        
Sbjct: 269  NLLNGIHKTRFLCLDMDSTEVLTYACLEFPTFNNLGYLQLYLKTFNSHFLVKL------- 321

Query: 684  WTIRHLIELLRHLPNIESLLLINTDGGCAFEKHFLIIETIPSI--ARLKSIEIQNFHGSR 511
                    LL   PN++ L +I  D  C  E  +     +PS   + L +   +++ G+ 
Sbjct: 322  --------LLEKCPNLDVLEIIKVDDLCDNEIKWAEPTIVPSCLSSHLTTFIFRDYEGTD 373

Query: 510  HELNFLRILLKNARILEKLTISIVSS 433
             E   +R +LK+ ++LE+ TI   SS
Sbjct: 374  EEFELIRYILKSGKVLERTTIYFGSS 399