BLASTX nr result

ID: Coptis24_contig00016826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016826
         (1016 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277138.1| PREDICTED: uncharacterized protein LOC100252...   156   7e-36
ref|XP_002520002.1| conserved hypothetical protein [Ricinus comm...   152   1e-34
ref|XP_004143661.1| PREDICTED: uncharacterized protein LOC101216...   146   7e-33
ref|XP_002325807.1| predicted protein [Populus trichocarpa] gi|2...   144   3e-32
ref|XP_003557165.1| PREDICTED: uncharacterized protein LOC100840...   137   8e-32

>ref|XP_002277138.1| PREDICTED: uncharacterized protein LOC100252883 [Vitis vinifera]
           gi|297737365|emb|CBI26566.3| unnamed protein product
           [Vitis vinifera]
          Length = 217

 Score =  156 bits (395), Expect = 7e-36
 Identities = 85/166 (51%), Positives = 102/166 (61%), Gaps = 1/166 (0%)
 Frame = -1

Query: 968 MENKVIVVCVTVXXXXXXXXXXXXXXXXXXIKGSQVQITALNTCTYPRSPXXXXXXXASV 789
           ME + +V+C  V                  IKGSQVQ ++   CTYPRSP       A+V
Sbjct: 1   MERRSLVLCTFVGFLGLLSAALGFAAEAKRIKGSQVQFSSSTACTYPRSPALPLGLTAAV 60

Query: 788 SLMIAQMMINVAAGCICCERNRQPSNSRRTVALFSYVFSWFTFVIAFLLLLSGASLNDQH 609
           +LMIAQ+MIN+A GCICC R   PSNS  T+AL  +V SWFTFVIAFLLLL+GA+LNDQH
Sbjct: 61  ALMIAQVMINIATGCICCRRGPHPSNSNWTLALICFVVSWFTFVIAFLLLLTGAALNDQH 120

Query: 608 GEDGTYFGN-YCYVLKXXXXXXXXXXXXXXXXXGIVYYLTLSSGKK 474
           GE+  YFGN YCYV+K                 GI+YYLTLSS K+
Sbjct: 121 GEESMYFGNYYCYVVKPGVFAGAAVLSLASVTLGILYYLTLSSAKE 166


>ref|XP_002520002.1| conserved hypothetical protein [Ricinus communis]
           gi|223540766|gb|EEF42326.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 210

 Score =  152 bits (384), Expect = 1e-34
 Identities = 81/165 (49%), Positives = 101/165 (61%), Gaps = 1/165 (0%)
 Frame = -1

Query: 968 MENKVIVVCVTVXXXXXXXXXXXXXXXXXXIKGSQVQITALNTCTYPRSPXXXXXXXASV 789
           ME    V+C  V                  IKGS+VQ T+   CTYPRSP       ++V
Sbjct: 1   MERNAFVLCCVVGFLGLLSAATGFGAEATRIKGSEVQFTSATQCTYPRSPALALGLTSAV 60

Query: 788 SLMIAQMMINVAAGCICCERNRQPSNSRRTVALFSYVFSWFTFVIAFLLLLSGASLNDQH 609
           +LMIAQ++INVA GCICC+R+  PSNS  T+AL  +V SWFTFVI+FLLLL+GA+LNDQH
Sbjct: 61  ALMIAQVLINVATGCICCKRSPHPSNSNWTIALVCFVVSWFTFVISFLLLLTGAALNDQH 120

Query: 608 GEDGTYFGN-YCYVLKXXXXXXXXXXXXXXXXXGIVYYLTLSSGK 477
           GE+  YFG+ YCYV+K                 GI+YYLTL+S K
Sbjct: 121 GEESMYFGSYYCYVVKPGVFAGGAVLALASVTLGILYYLTLNSSK 165


>ref|XP_004143661.1| PREDICTED: uncharacterized protein LOC101216661 [Cucumis sativus]
          Length = 211

 Score =  146 bits (369), Expect = 7e-33
 Identities = 79/167 (47%), Positives = 99/167 (59%), Gaps = 3/167 (1%)
 Frame = -1

Query: 968 MENKVIVVCVTVXXXXXXXXXXXXXXXXXXIKGSQVQITALNTCTYPRSPXXXXXXXASV 789
           ME KV+VVC  V                  IKGSQVQ  + + C YPRSP       A++
Sbjct: 1   MERKVLVVCSVVGLLGILSAVTGFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAI 60

Query: 788 SLMIAQMMINVAAGCICCERNRQPSNSRRTVALFSYVFSWFTFVIAFLLLLSGASLNDQH 609
           SL+IAQ+++NV++GCICC+R+  PSN    +AL S+V SWF+FVIAFLLLL+GA+LNDQH
Sbjct: 61  SLLIAQLIVNVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQH 120

Query: 608 GEDGTYFGN---YCYVLKXXXXXXXXXXXXXXXXXGIVYYLTLSSGK 477
           G    YFGN   YCYV+K                  IVYYLTL+  K
Sbjct: 121 GGGTMYFGNYYYYCYVVKPGVFAGGAILSLASVLLAIVYYLTLNLAK 167


>ref|XP_002325807.1| predicted protein [Populus trichocarpa] gi|222862682|gb|EEF00189.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  144 bits (363), Expect = 3e-32
 Identities = 79/165 (47%), Positives = 99/165 (60%), Gaps = 1/165 (0%)
 Frame = -1

Query: 968 MENKVIVVCVTVXXXXXXXXXXXXXXXXXXIKGSQVQITALNTCTYPRSPXXXXXXXASV 789
           ME K +V+C  V                  IKGS+VQ T+   CTYPRSP       A+V
Sbjct: 1   MERKALVLCSVVGLLGLLSVATGFGAEATRIKGSEVQFTSATQCTYPRSPALGLGLTAAV 60

Query: 788 SLMIAQMMINVAAGCICCERNRQPSNSRRTVALFSYVFSWFTFVIAFLLLLSGASLNDQH 609
           +L IAQ++INVA GC+CC+R++  SNS  T A   +V SWFTFVIAFLLLL+GA+LN+QH
Sbjct: 61  ALTIAQVIINVATGCVCCKRSQHSSNSNWTTAFVCFVISWFTFVIAFLLLLTGAALNNQH 120

Query: 608 GEDGTYFGN-YCYVLKXXXXXXXXXXXXXXXXXGIVYYLTLSSGK 477
           GE+  YFGN YCYV+K                 GI+ YLTL+S K
Sbjct: 121 GEETMYFGNYYCYVVKPGVFAGGAVLAFASVALGILCYLTLNSAK 165


>ref|XP_003557165.1| PREDICTED: uncharacterized protein LOC100840758 [Brachypodium
           distachyon]
          Length = 205

 Score =  137 bits (345), Expect(2) = 8e-32
 Identities = 70/164 (42%), Positives = 95/164 (57%)
 Frame = -1

Query: 968 MENKVIVVCVTVXXXXXXXXXXXXXXXXXXIKGSQVQITALNTCTYPRSPXXXXXXXASV 789
           ME KV+VVC  V                  +K S VQ  +   C YPRSP       ++V
Sbjct: 1   MERKVVVVCAVVGFLGVLSAALGFAAEGTRVKVSDVQTNSPGECIYPRSPALGLGLISAV 60

Query: 788 SLMIAQMMINVAAGCICCERNRQPSNSRRTVALFSYVFSWFTFVIAFLLLLSGASLNDQH 609
           +L++AQ +IN  AGCICC+R+  PS++  +VAL S++ SW TF+IAFLLLL+GA+LNDQ 
Sbjct: 61  TLVVAQCIINTVAGCICCKRHPVPSDTNWSVALISFIVSWVTFIIAFLLLLTGAALNDQR 120

Query: 608 GEDGTYFGNYCYVLKXXXXXXXXXXXXXXXXXGIVYYLTLSSGK 477
           GE+  YFG++CYV+K                  IVYY+ L+S K
Sbjct: 121 GEENMYFGSFCYVVKPGVFSGGAVLSLASVALAIVYYVALTSSK 164



 Score = 26.9 bits (58), Expect(2) = 8e-32
 Identities = 15/34 (44%), Positives = 16/34 (47%)
 Frame = -2

Query: 367 PNHGIAMXXXXXXXXXXXXXXXXPEDTYNRQQYP 266
           PN GIAM                 EDTYNRQQ+P
Sbjct: 173 PNQGIAMGQPVIPPQSSEPVFVH-EDTYNRQQFP 205


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