BLASTX nr result

ID: Coptis24_contig00016825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016825
         (1677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325713.1| nbs-lrr resistance protein [Populus trichoca...   239   1e-60
ref|XP_002325299.1| BED finger-nbs resistance protein [Populus t...   230   1e-57
ref|XP_002325714.1| BED finger-nbs-lrr resistance protein [Popul...   223   9e-56
ref|XP_002283414.1| PREDICTED: probable disease resistance prote...   222   2e-55
ref|XP_002333267.1| BED finger-nbs-lrr resistance protein [Popul...   222   3e-55

>ref|XP_002325713.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222862588|gb|EEF00095.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 929

 Score =  239 bits (611), Expect = 1e-60
 Identities = 188/579 (32%), Positives = 294/579 (50%), Gaps = 20/579 (3%)
 Frame = +1

Query: 1    LIDYWINEALIKE-RHRQEENDKGQFILNKLKNCCMLQSHHAAMVYYRSYVQMHDLLRDL 177
            LI Y I+E +IK  + R+ E +KG  ILNKL+  C+L+S          YV+MHDL+RD+
Sbjct: 313  LIAYLIDEGVIKGLKSREAEFNKGHSILNKLERVCLLESAE------EGYVKMHDLIRDM 366

Query: 178  ALKITATSQNVLVRAGTKLEEISDVSDWVENLEKASLMYNEIDAIYVS--PKCPGLSTLL 351
            A++I   +   +V+AG +L E+    +W E+L + SLM+N+I  I  S  P+CP LSTLL
Sbjct: 367  AIQILQENSQGMVKAGAQLRELPGEEEWTEHLMRVSLMHNQIKEIPSSHSPRCPSLSTLL 426

Query: 352  LQRNP-LQSIPRDFFVYLQGLRVLDLSETKLEVLPDSISELVNLRVLLLSSCNELKRIPS 528
            L+ N  LQ I   FF  L+GL+VLDLS T +  LPDS+SELV+L  LLL  C  L+ +PS
Sbjct: 427  LRGNSELQFIADSFFEQLRGLKVLDLSYTGITKLPDSVSELVSLTALLLIDCKMLRHVPS 486

Query: 529  VAKLQLLEVLKLNSS-ALAELPEGMEALVKLKILDLWKTCLREIPTGLISKFFLLQELRL 705
            + KL+ L+ L L+ + AL ++P+GME L  L+ L +     +E P+GL+ K   LQ   L
Sbjct: 487  LEKLRALKRLDLSGTRALEKIPQGMECLCNLRYLRMNGCGEKEFPSGLLPKLSHLQVFVL 546

Query: 706  EQHHVEKESGITSVEDLLGLRQVENLTVHFPCLSNFII---SSQIPKGLNNFNFMVAGPN 876
            E+       G    +++  LR++E+L  HF   S+++    S    K L  +  +V GP 
Sbjct: 547  EEWIPITVKG----KEVAWLRKLESLECHFEGYSDYVEYLKSRDETKSLTTYQILV-GPL 601

Query: 877  ELSEMVAKMHILEITQSHWKRLVSISNKIHRIPDSALVLPQNTQYLHIQQFNDITRFSE- 1053
            +        +  +      K +V  +  I R     ++ P++ Q L I   +D T   + 
Sbjct: 602  D-KYRYGYGYDYDHDGCRRKTIVWGNLSIDRDGGFQVMFPKDIQQLTIHNNDDATSLCDC 660

Query: 1054 LSCLKEARDLRMCCISACRKMECIMSSED------ETEKKGHLLQHVEMLEIEKCPNVKF 1215
            LS +K A +L +  I  C  ME  +SS         +     +   ++      C ++K 
Sbjct: 661  LSLIKNATELEVINIRCCNSMESFVSSSWFRSAPLPSPSYNGIFSGLKRFNCSGCKSMKK 720

Query: 1216 LFSSKLFKQLQKLAEVRVTDCGKFKEIIIAT--EDEETQGEESCTS--APXXXXXXXXXX 1383
            LF   L   L  L ++ V  C + +EII  T  ++E   G  S      P          
Sbjct: 721  LFPLVLLPSLVNLEDITVRRCVRMEEIIGGTRPDEEGVMGSSSNIEFKLPKLRYLKLEGL 780

Query: 1384 XXXXXXFSRRSVQHFQNLELISVYNCGELEELMEGKQEKSEGSCSSNSDFNNSTIITLPS 1563
                   S + +    ++E+I V NC ++EE++ G +   EG     S+  + T + L  
Sbjct: 781  PELKSICSAKLI--CDSIEVIVVSNCEKMEEIISGTRSDEEGVKGEESNSCSITDLKLTK 838

Query: 1564 LQFICLDEV-NLKRLWSGIVVCKSLRKLEVYDCHELKTL 1677
            L+ + L E+  LKR+ S  ++C SL+ + V DC  LK +
Sbjct: 839  LRSLTLSELPELKRICSAKLICNSLQVIAVADCENLKRM 877


>ref|XP_002325299.1| BED finger-nbs resistance protein [Populus trichocarpa]
            gi|222862174|gb|EEE99680.1| BED finger-nbs resistance
            protein [Populus trichocarpa]
          Length = 1288

 Score =  230 bits (586), Expect = 1e-57
 Identities = 185/593 (31%), Positives = 296/593 (49%), Gaps = 34/593 (5%)
 Frame = +1

Query: 1    LIDYWINEALIKE-RHRQEENDKGQFILNKLKNCCMLQSHHAAMVYYRSYVQMHDLLRDL 177
            LIDY I+E +I+    RQE  D+G  +LN+L+N                 V+MHDL+RD+
Sbjct: 443  LIDYLIDEGVIERVESRQEAVDEGHTMLNRLEN-----------------VKMHDLIRDM 485

Query: 178  ALKITATSQNVLVRAGTKLEEISDVSDWVENLEKASLMYNEIDAIYV--SPKCPGLSTLL 351
            A++I   +   +V+AG +L E+    +W ENL + SLM+N+I+ I    SP+CP LSTLL
Sbjct: 486  AIQILQENSQGMVKAGARLREVPGAEEWTENLTRVSLMHNQIEEIPSTHSPRCPSLSTLL 545

Query: 352  LQRNP-LQSIPRDFFVYLQGLRVLDLSETKLEVLPDSISELVNLRVLLLSSCNELKRIPS 528
            L  N  LQ I   FF  L  L+VLDLS T +  LPDS+SELV+L  LLL  C  L+ +PS
Sbjct: 546  LCDNSQLQFIADSFFEQLHWLKVLDLSRTGITKLPDSVSELVSLTALLLIDCKMLRHVPS 605

Query: 529  VAKLQLLEVLKLNSS-ALAELPEGMEALVKLKILDLWKTCLREIPTGLISKFFLLQELRL 705
            + KL+ L+ L L+ + AL ++P+GME L  L+ L +     +E P+GL+ K   LQ   L
Sbjct: 606  LEKLRALKRLDLSGTWALEKIPQGMECLGNLRYLRMNGCGEKEFPSGLLPKLSHLQVFVL 665

Query: 706  EQHHVEKESGITSV-------EDLLGLRQVENLTVHFPCLSNFI---ISSQIPKGLNNFN 855
            ++     E  ++         +++  LR++E+L  HF   S+++    S    K L  + 
Sbjct: 666  QEWIPFTEDIVSHYVPVTVKGKEVAWLRKLESLECHFEGYSDYVEYLKSRDETKSLTTYQ 725

Query: 856  FMVAGPNELSEMVAKMHILEITQSH----WKRLVSISNKIHRIPDSALVLPQNTQYLHIQ 1023
             +V   ++        +  +    +     K +V  +  I R     ++ P++ Q L I 
Sbjct: 726  ILVGPRDKYRYGYDYNYGYDYNYGYDGCRRKTIVWGNLSIDRDGGFQVMFPKDIQQLTID 785

Query: 1024 QFNDITRFSELSC-LKEARDLRMCCISACRKMECIMSSE------DETEKKGHLLQHVEM 1182
              +D T   ++S  +K A DL +  I +C  ME ++SS         +     +   ++ 
Sbjct: 786  NNDDATSLCDVSSQIKYATDLEVIKIFSCYSMESLVSSSWFRSAPLPSPSYNGIFSGLKR 845

Query: 1183 LEIEKCPNVKFLFSSKLFKQLQKLAEVRVTDCGKFKEIIIAT--EDEETQGEESCTS--- 1347
                 C ++K LF   L   L  L  +RV+DC K +EII  T  ++E   GEE+ +S   
Sbjct: 846  FNCSGCKSMKKLFPLVLLPSLVNLENIRVSDCEKMEEIIGGTRPDEEGVMGEETSSSNIE 905

Query: 1348 --APXXXXXXXXXXXXXXXXFSRRSVQHFQNLELISVYNCGELEELMEGKQEKSEGSCSS 1521
               P                 S + +    ++  I V NC ++EE++ G +   EG    
Sbjct: 906  FKLPKLTMLALEGLPELKRICSAKLI--CDSIGAIDVRNCEKMEEIIGGTRSDEEGVMGE 963

Query: 1522 NSDFNNSTIITLPSLQFICLDEV-NLKRLWSGIVVCKSLRKLEVYDCHELKTL 1677
             S    ST + LP L F+ L  +  LK ++S  ++C SL+ ++V +C +LK +
Sbjct: 964  ES----STDLKLPKLIFLQLIRLPELKSIYSAKLICDSLQLIQVRNCEKLKRM 1012


>ref|XP_002325714.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222862589|gb|EEF00096.1| BED finger-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1010

 Score =  223 bits (569), Expect = 9e-56
 Identities = 170/475 (35%), Positives = 256/475 (53%), Gaps = 26/475 (5%)
 Frame = +1

Query: 1    LIDYWINEALIKERH-RQEENDKGQFILNKLKNCCMLQSHHAAMVYYRSYVQMHDLLRDL 177
            LID  I+E +I+    RQE  D+G  +LN+L++ C+L+S       Y SYV+MHDL+RD+
Sbjct: 441  LIDNLIDEGIIERMESRQEAVDEGHSMLNRLESVCLLESAKKGYGGY-SYVKMHDLIRDM 499

Query: 178  ALKITATSQNVLVRAGTKLEEISDVSDWVENLEKASLMYNEIDAIYV--SPKCPGLSTLL 351
            A++    +   +V+AG +L E+ D  +W ENL + SLM N+I+ I    SP+CP LSTLL
Sbjct: 500  AIQTLQENSQCMVKAGARLSELPDAEEWTENLTRVSLMQNQIEEIPSTHSPRCPSLSTLL 559

Query: 352  LQRNP-LQSIPRDFFVYLQGLRVLDLSETKLEVLPDSISELVNLRVLLLSSCNELKRIPS 528
            L+ N  LQ I   FF  L GL+VLDLS T +  LPDS+SELV+L  LLL  C  L+ +PS
Sbjct: 560  LRYNSELQFIADSFFEQLHGLKVLDLSYTGITKLPDSVSELVSLTALLLIGCKMLRHVPS 619

Query: 529  VAKLQLLEVLKLNSS-ALAELPEGMEALVKLKILDLWKTCLREIPTGLISKFFLLQELRL 705
            + KL++L+ L L+ + AL ++P+GME L  L+ L +     +E P+GL+ K   LQ   L
Sbjct: 620  LEKLRVLKRLDLSGTRALEKIPQGMECLCNLRHLRMNGCGEKEFPSGLLPKLSHLQVFVL 679

Query: 706  EQ--------HHVEKESGITSVEDLLG-LRQVENLTVHFPCLSN---FIISSQIPKGLNN 849
            E+        +   + + +T     +G LR++E+L  HF   S+   FI S    K L  
Sbjct: 680  EEWIPPGTKDNRRGQPAPLTVKGKEVGCLRKLESLVCHFEGYSDYVEFIKSRDETKSLTT 739

Query: 850  FNFMVAGPNELSEMVAKMHILEITQSHWKRLVSISNKIHRIPDSALVLPQNTQYLHIQQF 1029
            +  +V GP +  +     +     +   K +V  S  I R     ++ P++ Q L I   
Sbjct: 740  YQTLV-GPLDKYDYDYDDYDYGCRR---KTIVWGSLSIDRDGGFQVMFPKDIQQLTIDNN 795

Query: 1030 NDITRFSELSC-LKEARDLRMCCISACRKMECIMSSE------DETEKKGHLLQHVEMLE 1188
            +D T   ++S  +K A DL +  I +C  ME ++SS         +     +   ++   
Sbjct: 796  DDATSLCDVSSQIKYATDLEVIKIFSCNSMESLVSSSWFRSTPPPSPSYNGIFSGLKKFF 855

Query: 1189 IEKCPNVKFLFSSKLFKQLQKLAEVRVTDCGKFKEIIIAT--EDEETQGEESCTS 1347
               C ++K LF   L   L KL E+ V DC K KEII  T  ++E   GEE+ +S
Sbjct: 856  CSGCSSMKKLFPLVLLPNLVKLEEIIVEDCEKMKEIIGGTRPDEEGVMGEETSSS 910


>ref|XP_002283414.1| PREDICTED: probable disease resistance protein At4g27220-like [Vitis
            vinifera]
          Length = 1016

 Score =  222 bits (566), Expect = 2e-55
 Identities = 161/479 (33%), Positives = 246/479 (51%), Gaps = 39/479 (8%)
 Frame = +1

Query: 1    LIDYWINEALIKER-HRQEENDKGQFILNKLKNCCMLQSHHAAMVYYRSYVQMHDLLRDL 177
            LI YWI E LI+E   RQ E D+G  ILNKL+N C+L+            V+MHD++RD+
Sbjct: 415  LIRYWIAEGLIEEMGSRQAERDRGHAILNKLENVCLLEKCENGKC-----VKMHDVIRDM 469

Query: 178  ALKITATSQNVLVRAGTKLEEISDVSDWVENLEKASLMYNEIDAIYVSPKCPGLSTLLLQ 357
            A+ IT  +   +V+    LE++ +  +W  N+E+ SLM + +  +   P CP LSTL LQ
Sbjct: 470  AINITRKNSRFMVKTRRNLEDLPNEIEWSNNVERVSLMDSHLSTLMFVPNCPKLSTLFLQ 529

Query: 358  RNPL--------QSIPRDFFVYLQGLRVLDLSETKLEVLPDSISELVNLRVLLLSSCNEL 513
            +           + +P  FFV++  LRVLDLS T + +LPDSI ++VNLR L+L  C EL
Sbjct: 530  KPKFSYPPKGLHEGLPNSFFVHMLSLRVLDLSCTNIALLPDSIYDMVNLRALILCECREL 589

Query: 514  KRIPSVAKLQLLEVLKLNSSALAELPEGMEALVKLKILDLWKTCLRE--IPTGLISKFFL 687
            K++ S+AKL+ L  L L+ + +  +P G+E LV LK         R+  +P  L      
Sbjct: 590  KQVGSLAKLKELRELDLSWNEMETIPNGIEELVLLKHFSWISYHSRQTILPNPLSKLLPN 649

Query: 688  LQELRLEQHHVEKESGITSVEDLLGLRQVENLTVHFPCLSNF--IISSQIPKGLNNFNFM 861
            L +L+  +H  EK   +  VE+L GLR++E L V+F  L NF   + +Q  + L ++   
Sbjct: 650  LLQLQCLRHDGEKFLDV-GVEELSGLRKLEVLDVNFSSLHNFNSYMKTQHYRRLTHYRVR 708

Query: 862  VAGPNELSEMVAKM---HILEITQSHWKRLVSISNKIHRIPDSALVLPQNTQYLHIQQFN 1032
            ++G  E S ++      H        W+  ++   K +   D  LVLP N Q+L I   N
Sbjct: 709  LSG-REYSRLLGSQRNRHGFCKEVEVWECKLTEGGKDN--DDYQLVLPTNVQFLQIYTCN 765

Query: 1033 DITRFSELS-CLKEARDLRMCCISACRKMECIMSSEDETEKKGHLL-------------- 1167
            D T   ++S  LK A DL+ C IS C  ++ +   ED  +    L               
Sbjct: 766  DPTSLLDVSPSLKIATDLKACLISKCEGIKYLWWVEDCIDSLNSLFLDLLPNLRVLFKLK 825

Query: 1168 -------QHVEMLEIEKCPNVKFLFSSKLFK-QLQKLAEVRVTDCGKFKEIIIATEDEE 1320
                     ++ L + KC N+K L + +L K  LQ L  + V  C + ++II+  E+E+
Sbjct: 826  PTDNVRCSSLKHLYVSKCHNLKHLLTLELVKNHLQNLQNIYVRSCSQMEDIIVGVEEED 884


>ref|XP_002333267.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222835868|gb|EEE74289.1| BED finger-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1077

 Score =  222 bits (565), Expect = 3e-55
 Identities = 177/525 (33%), Positives = 271/525 (51%), Gaps = 32/525 (6%)
 Frame = +1

Query: 1    LIDYWINEALIKERHRQE-ENDKGQFILNKLKNCCMLQSH--HAAMVYYRSYVQMHDLLR 171
            LI Y I+E +IK   R+E E DKG  +LNKL++ C+L+    ++     R+ V+MHDL+R
Sbjct: 508  LIAYLIDEGVIKGLTRREAEFDKGHTMLNKLESACLLEDAKLYSGRRCVRA-VKMHDLIR 566

Query: 172  DLALKITATSQNVLVRAGTKLEEISDVSDWVENLEKASLMYNEIDAIYVS--PKCPGLST 345
            D+A++I   +   +V+AG +L E+    +W ENL + SLM N+I  I  S  P+CP LST
Sbjct: 567  DMAIQILQENSQGMVKAGAQLRELPGAEEWTENLTRVSLMQNQIKEIPFSHSPRCPSLST 626

Query: 346  LLLQRNP-LQSIPRDFFVYLQGLRVLDLSETKLEVLPDSISELVNLRVLLLSSCNELKRI 522
            LLL RNP LQ I   FF  L GL+VLDLS T +  LPDS+SELV+L  LLL  C  L+ +
Sbjct: 627  LLLCRNPKLQFIADSFFEQLHGLKVLDLSYTGITKLPDSVSELVSLTALLLIDCKMLRHV 686

Query: 523  PSVAKLQLLEVLKLNSS-ALAELPEGMEALVKLKILDLWKTCLREIPTGLISKFFLLQEL 699
            PS+ KL+ L+ L L+ + AL ++P+GME L  L+ L +     +E P+GL+ K   LQ  
Sbjct: 687  PSLEKLRALKRLDLSGTWALEKIPQGMECLCNLRYLIMNGCGEKEFPSGLLPKLSHLQVF 746

Query: 700  RLEQ--------HHVEKESGITSVEDLLG-LRQVENLTVHFPCLSN---FIISSQIPKGL 843
             LE+        +   +++ IT     +G LR++E+L  HF   S+   ++ S    K L
Sbjct: 747  VLEEWIPRPTGDYRERQDAPITVKGKEVGCLRKLESLACHFEGCSDYMEYLKSQDETKSL 806

Query: 844  NNFNFMVAGPNELSEMVAKMHILEITQSHWKRLVSISNKIHRIPDSALVLPQNTQYLHIQ 1023
              +  +V GP +  +     +         K +V  +  I R     ++ P++ Q L I 
Sbjct: 807  TTYQILV-GPLDKYDY---CYCYGYDGCRRKAIVRGNLSIDRDGGFQVMFPKDIQQLSIH 862

Query: 1024 QFNDITRFSE-LSCLKEARDLRMCCISACRKMECIMSSE------DETEKKGHLLQHVEM 1182
              +D T   + LS +K   +L    I +C  ME ++SS         +     +   ++ 
Sbjct: 863  NNDDATSLCDFLSLIKSVTELEAITIFSCNSMESLVSSSWFRSAPLPSPSYNGIFSSLKK 922

Query: 1183 LEIEKCPNVKFLFSSKLFKQLQKLAEVRVTDCGKFKEIIIAT--EDEETQGEESCTSAPX 1356
                 C ++K LF   L   L KL E+ VT C K +EII  T  ++E   GEES +S+  
Sbjct: 923  FFCSGCSSMKKLFPLVLLPNLVKLEEITVTKCEKMEEIIGGTRSDEEGVMGEESSSSSIT 982

Query: 1357 XXXXXXXXXXXXXXXFSRRSVQHFQ----NLELISVYNCGELEEL 1479
                               S+   +    +L+ I+VYNC +L+ +
Sbjct: 983  DLKLTKLSSLTLIELPELESICSAKLICDSLKEIAVYNCKKLKRM 1027


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