BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016819
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003565610.1| PREDICTED: putative F-box/LRR-repeat protein...    67   2e-09
ref|XP_003565630.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    65   6e-09
ref|NP_001176770.1| Os12g0127400 [Oryza sativa Japonica Group] g...    62   5e-08
gb|EAY82142.1| hypothetical protein OsI_37336 [Oryza sativa Indi...    62   5e-08
dbj|BAC83334.1| hypothetical protein [Oryza sativa Japonica Grou...    60   1e-07

>ref|XP_003565610.1| PREDICTED: putative F-box/LRR-repeat protein At5g54820-like
           [Brachypodium distachyon]
          Length = 522

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/91 (38%), Positives = 54/91 (59%)
 Frame = -1

Query: 324 NLPIDFTGFSSLQTLCLSQVSITDDTLESIVSKCPLLTNLYLRYCNNLGSIKVAGPNLQL 145
           ++P    G + L +L LS V +TDD L   VS CP+L  L LR C+ L ++++AG   +L
Sbjct: 178 HVPPGAAGLAGLTSLSLSHVDVTDDALRDAVSGCPVLEFLSLRSCDLLSNVRIAGG--RL 235

Query: 144 KTLSVIVTDAYAVDIFAPNLKSVHFHGDILY 52
           + L V+      + + AP L+S  FHGD++Y
Sbjct: 236 RGLEVVRCQVRQLQVAAPALESFAFHGDLMY 266


>ref|XP_003565630.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like
           [Brachypodium distachyon]
          Length = 520

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
 Frame = -1

Query: 324 NLPIDFTGFSSLQTLCLSQVSITDDTLESIVSKCPLLTNLYLRYCNNLGSIKVAGPNLQL 145
           N+P    G + L +L L+ V ITDD +   V+ C LL  L LR C+ L  +++AG N  L
Sbjct: 169 NVPPGAPGLAGLTSLSLTHVDITDDAVRDTVACCRLLEFLSLRNCHLLKFVRIAGEN--L 226

Query: 144 KTLSVI-VTDAYAVDIFAPNLKSVHFHGDILYGYDFRNVSALE 19
           + L V+   D   + + AP L+S  FHGDILY + +R   +LE
Sbjct: 227 RGLEVVGCLDVRQLQVAAPALESFAFHGDILY-FKYREDESLE 268


>ref|NP_001176770.1| Os12g0127400 [Oryza sativa Japonica Group]
           gi|77553566|gb|ABA96362.1| F-box domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|125578377|gb|EAZ19523.1| hypothetical protein
           OsJ_35088 [Oryza sativa Japonica Group]
           gi|255670007|dbj|BAH95498.1| Os12g0127400 [Oryza sativa
           Japonica Group]
          Length = 358

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/97 (34%), Positives = 56/97 (57%)
 Frame = -1

Query: 348 LRTSHIELNLPIDFTGFSSLQTLCLSQVSITDDTLESIVSKCPLLTNLYLRYCNNLGSIK 169
           LR   + LN P+DF GF++L+ L L  V +    LE ++SKC +L  L ++ CN L ++ 
Sbjct: 213 LRLDSVTLNPPLDFCGFANLKLLALDNVRLQH--LEQLISKCHVLEWLSIQSCNQLHNLH 270

Query: 168 VAGPNLQLKTLSVIVTDAYAVDIFAPNLKSVHFHGDI 58
           V+ P  +L+ LS+       +++ APNL +  + G +
Sbjct: 271 VSEPLCRLQCLSIQGCHLQRMELHAPNLTTFEYDGSL 307


>gb|EAY82142.1| hypothetical protein OsI_37336 [Oryza sativa Indica Group]
          Length = 446

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/97 (34%), Positives = 56/97 (57%)
 Frame = -1

Query: 348 LRTSHIELNLPIDFTGFSSLQTLCLSQVSITDDTLESIVSKCPLLTNLYLRYCNNLGSIK 169
           LR   + LN P+DF GF++L+ L L  V +    LE ++SKC +L  L ++ CN L ++ 
Sbjct: 213 LRLDSVTLNPPLDFCGFANLKLLALDNVRLQH--LEQLISKCHVLEWLSIQSCNQLHNLH 270

Query: 168 VAGPNLQLKTLSVIVTDAYAVDIFAPNLKSVHFHGDI 58
           V+ P  +L+ LS+       +++ APNL +  + G +
Sbjct: 271 VSEPLCRLQCLSIQGCHLQRMELHAPNLTTFEYDGSL 307


>dbj|BAC83334.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|125600679|gb|EAZ40255.1| hypothetical protein
           OsJ_24698 [Oryza sativa Japonica Group]
          Length = 534

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
 Frame = -1

Query: 327 LNLPIDFTGFSSLQTLCLSQVSITDDTLESIVSKCPLLTNLYLRYCNNLGSIKVAGPNLQ 148
           L++P+ F GF SL  L  +++ I++D +++++  CP L    LR C+    +K+A P+LQ
Sbjct: 235 LSIPVGFAGFKSLVELSFTEMHISEDMIQTLIENCPNLECFRLRLCSGARHLKIASPHLQ 294

Query: 147 LKTLSV-IVTDAYAVDIFAPNLKSVHFHG 64
           L+ + V        +++FAP L+   + G
Sbjct: 295 LREIMVKSCLQITHMELFAPKLQQFTYRG 323