BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016808
         (1154 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002870349.1| hypothetical protein ARALYDRAFT_915515 [Arab...    68   4e-09
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    64   9e-08
emb|CBI40164.3| unnamed protein product [Vitis vinifera]               63   2e-07
gb|AAF30317.1|AC018907_17 hypothetical protein [Arabidopsis thal...    63   2e-07
ref|NP_566277.2| F-box/kelch-repeat protein [Arabidopsis thalian...    63   2e-07

>ref|XP_002870349.1| hypothetical protein ARALYDRAFT_915515 [Arabidopsis lyrata subsp.
            lyrata] gi|297316185|gb|EFH46608.1| hypothetical protein
            ARALYDRAFT_915515 [Arabidopsis lyrata subsp. lyrata]
          Length = 405

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 73/275 (26%), Positives = 119/275 (43%), Gaps = 20/275 (7%)
 Frame = -2

Query: 1141 GTVNGLICFSPETIDYLPSPYYICNPIT*DYVIAPDSPNIRYGH-----IASAFGFDSVG 977
            G+ NGL+C +      L +  ++ NP T +    PD P            +  FGFDS+ 
Sbjct: 148  GSSNGLLCMANIL---LLNDVFLYNPTTGESKKLPDLPESLRSKSTKTLFSYGFGFDSLN 204

Query: 976  NQYKWLFEMWE*GRSI*SGVR*LETDKHKYSLC*LHE-----LVSRTLNGCLHWIASSTV 812
            N +K +  +      + S    L+TD  +  +C +         S  LNG +HWI+    
Sbjct: 205  NDFKVVKFIDGNDNYVYS----LKTDSWR-RICNMPYKDVCFFTSVELNGAIHWISIPRR 259

Query: 811  NDKFATVILSLNVSTEEFSIIQMPSNINGLEFSCYY-----ELTVLREHLCVTFPDSMGY 647
             +    V+ + +++TE+F ++ +P     L   C +     ++ +L+  LCV +   M  
Sbjct: 260  GETSQKVVTAFDLTTEKFRVMSLPD----LAEECEHIYPKSKVGILKGRLCVVY-FCMKI 314

Query: 646  NGETWVMNEYGKLGSWAKENVFIQELSLRRGHEVMELSNNELFMIGKSHGLGYYNPEKKT 467
            +   WVMNEYG   SW+K  +     S +    +    NNE  ++     L  YN E+ T
Sbjct: 315  HDVIWVMNEYGLESSWSKIRI---SRSYKHMKPLCSTENNEEVLLVLDGHLVLYNFERNT 371

Query: 466  FDNILVLGVNGWEVGNAEFQIFLTG-----SLLSP 377
              N+ + GV        EF   L G     SL+SP
Sbjct: 372  RKNLKIRGV--------EFDKSLLGNTYVESLISP 398


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
            gi|147785390|emb|CAN68678.1| hypothetical protein
            VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 63.5 bits (153), Expect = 9e-08
 Identities = 80/294 (27%), Positives = 117/294 (39%), Gaps = 38/294 (12%)
 Frame = -2

Query: 1153 FEVVGTVNGLICFSPETIDYLPSPYYICNPIT*DYVIAPDSPNIRYGHIASAFGFDSVGN 974
            FEVVG+ NGL+C +           Y+ NP T D+   P S       +   FG+  +  
Sbjct: 122  FEVVGSCNGLLCLADSLFK---DAVYVHNPFTRDFKQLPKSLQYPDQEVVFGFGYHPMTE 178

Query: 973  QYKWLFEMW-E*GRSI*SGVR*LETDKHKYSLC*LHELVSRTL----------------N 845
             YK +  ++   G    S  R +   + +  +  L     R+L                N
Sbjct: 179  VYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPTWRSLGKVSYQLDRWPSEALVN 238

Query: 844  GCLHWIASSTVNDKFAT-VILSLNVSTEEFSIIQMPSNINGLEFSCYYELTVLREHLCVT 668
            G LHW+   T   ++ T  I+S +++ E+F  I  P +  GL   C Y L VL   L   
Sbjct: 239  GRLHWV---TRPRRYVTRFIVSFDLADEQFREIPKP-DCGGLS-RCNYHLLVLGGCLSAA 293

Query: 667  FPDSMGYNGETWVMNEYGKLGSWAKE-NVFIQ-----ELSLRRGHEVME----------- 539
               S G   E WVM EY    SW KE N+        +  + R H +             
Sbjct: 294  VHRSNG-KLEVWVMKEYDVKESWIKEFNIGAHLPKGLKQDVNRPHRIWRNAPKGRGVRLL 352

Query: 538  --LSNNELFMIGKSHGLGYYNPEKKTFDNILVLGVNGWEVGNAEFQIFL-TGSL 386
              L N E+ +  K   L  YNPE+  F ++ + G+  W      FQ F+  GSL
Sbjct: 353  CLLKNGEILLEYKGRVLVSYNPERGKFKDLTLKGLPNW------FQTFVHVGSL 400


>emb|CBI40164.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 73/267 (27%), Positives = 111/267 (41%), Gaps = 27/267 (10%)
 Frame = -2

Query: 1153 FEVVGTVNGLICFSPETI--DYLPSPYYICNPIT*DYVIAPD-------SPNIRYGHIAS 1001
            +++VG+ NGLIC +       YL    ++ NP   ++   P        SP +  G    
Sbjct: 110  YQIVGSSNGLICLTESNFKGSYLSLNLFLWNPAIREFQTLPKYHINNFTSPLMVVG---L 166

Query: 1000 AFGFDSVGNQYKWLFEMWE*GRSI*SGVR*LETDKHKYSL-------------C*LHELV 860
             F F  V N YK +  ++         +R   ++   YSL             C +H  V
Sbjct: 167  GFAFHPVINDYKVVRIVYF--------MRNKTSEADVYSLRTGSWRKVDANICCYIHSNV 218

Query: 859  SRT-LNGCLHWIASSTVN-DKFATVILSLNVSTEEFSIIQMPS-NINGLEFSCYYELTVL 689
            SRT +NG LHW+A      D    +ILS +++ + F  I +P    + L   C   L   
Sbjct: 219  SRTFINGALHWLAGKKNEMDNTDNLILSFDMAKDVFKEIMLPDFGYDELIRKC---LADY 275

Query: 688  REHLCVTFPDSM--GYNGETWVMNEYGKLGSWAKENVFIQELSLRRGHEVMELSNNELFM 515
            +  L V F D+     N + WVM EYG   SW K      E+ +    E  + +   +  
Sbjct: 276  KGSLSVLFYDAYHSNENCDVWVMEEYGVAKSWTKHFTIRHEIEIIIPFEFFD-NGEAILQ 334

Query: 514  IGKSHGLGYYNPEKKTFDNILVLGVNG 434
              KS G   +NP+   F +   LGV+G
Sbjct: 335  KKKSGGFISWNPDGIRFRD---LGVSG 358


>gb|AAF30317.1|AC018907_17 hypothetical protein [Arabidopsis thaliana]
            gi|21536665|gb|AAM60997.1| unknown [Arabidopsis thaliana]
          Length = 416

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 69/279 (24%), Positives = 119/279 (42%), Gaps = 17/279 (6%)
 Frame = -2

Query: 1150 EVVGTVNGLICFSPETIDYLPSPYYICNPIT*DYVIAPDS---PNIRY---GHIASAFGF 989
            E+VG+ NGL+C SP          ++ NP T D    P++    ++ Y         FGF
Sbjct: 153  EIVGSSNGLVCISPGE-----GAVFLYNPTTGDSKRLPENFRPKSVEYERDNFQTYGFGF 207

Query: 988  DSVGNQYKWLFEMWE*GRSI*SGVR*LETDKHKYSLC*L---HELVSRT----LNGCLHW 830
            D + + YK +  +      + + V  L+ D  +  +C L   H   S T     NG +HW
Sbjct: 208  DGLTDDYKLVKLVATSEDILDASVYSLKADSWR-RICNLNYEHNDGSYTSGVHFNGAIHW 266

Query: 829  IASSTVNDKFATVILSLNVSTEEFSIIQMPSNINGLEFS-CYYELTVLREHLCVTFPDSM 653
            + + + +++   V+++ ++ TEEF  + +P            + +  L   LCV      
Sbjct: 267  VFTESRHNQ--RVVVAFDIQTEEFREMPVPDEAEDCSHRFSNFVVGSLNGRLCVV-NSCY 323

Query: 652  GYNGETWVMNEYGKLGSWAKENVFIQELSLRRGHEVMELSNNELFMIGKSHGLGYYNPEK 473
              + + WVM+EYG+  SW++  +    L  R    +    N+E  ++     L  YN E 
Sbjct: 324  DVHDDIWVMSEYGEAKSWSRIRI---NLLYRSMKPLCSTKNDEEVLLELDGDLVLYNFET 380

Query: 472  KTFDNILVLGV---NGWEVGNAEFQIFLTGSLLSPRIIG 365
                N+ + GV   +G+E            SL+SP   G
Sbjct: 381  NASSNLGICGVKLSDGFEANT------YVESLISPNSYG 413


>ref|NP_566277.2| F-box/kelch-repeat protein [Arabidopsis thaliana]
            gi|75151183|sp|Q8GXC7.1|FBK50_ARATH RecName:
            Full=F-box/kelch-repeat protein At3g06240
            gi|26451648|dbj|BAC42921.1| unknown protein [Arabidopsis
            thaliana] gi|29824145|gb|AAP04033.1| putative F-box
            protein family [Arabidopsis thaliana]
            gi|332640843|gb|AEE74364.1| F-box/kelch-repeat protein
            [Arabidopsis thaliana]
          Length = 427

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 69/279 (24%), Positives = 119/279 (42%), Gaps = 17/279 (6%)
 Frame = -2

Query: 1150 EVVGTVNGLICFSPETIDYLPSPYYICNPIT*DYVIAPDS---PNIRY---GHIASAFGF 989
            E+VG+ NGL+C SP          ++ NP T D    P++    ++ Y         FGF
Sbjct: 164  EIVGSSNGLVCISPGE-----GAVFLYNPTTGDSKRLPENFRPKSVEYERDNFQTYGFGF 218

Query: 988  DSVGNQYKWLFEMWE*GRSI*SGVR*LETDKHKYSLC*L---HELVSRT----LNGCLHW 830
            D + + YK +  +      + + V  L+ D  +  +C L   H   S T     NG +HW
Sbjct: 219  DGLTDDYKLVKLVATSEDILDASVYSLKADSWR-RICNLNYEHNDGSYTSGVHFNGAIHW 277

Query: 829  IASSTVNDKFATVILSLNVSTEEFSIIQMPSNINGLEFS-CYYELTVLREHLCVTFPDSM 653
            + + + +++   V+++ ++ TEEF  + +P            + +  L   LCV      
Sbjct: 278  VFTESRHNQ--RVVVAFDIQTEEFREMPVPDEAEDCSHRFSNFVVGSLNGRLCVV-NSCY 334

Query: 652  GYNGETWVMNEYGKLGSWAKENVFIQELSLRRGHEVMELSNNELFMIGKSHGLGYYNPEK 473
              + + WVM+EYG+  SW++  +    L  R    +    N+E  ++     L  YN E 
Sbjct: 335  DVHDDIWVMSEYGEAKSWSRIRI---NLLYRSMKPLCSTKNDEEVLLELDGDLVLYNFET 391

Query: 472  KTFDNILVLGV---NGWEVGNAEFQIFLTGSLLSPRIIG 365
                N+ + GV   +G+E            SL+SP   G
Sbjct: 392  NASSNLGICGVKLSDGFEANT------YVESLISPNSYG 424