BLASTX nr result

ID: Coptis24_contig00016752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016752
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320979.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32
ref|XP_002275655.1| PREDICTED: uncharacterized protein LOC100258...   143   2e-32
ref|XP_002301506.1| multidrug resistance protein ABC transporter...   142   2e-32
ref|XP_002515299.1| conserved hypothetical protein [Ricinus comm...   142   4e-32
ref|XP_003591419.1| Multidrug resistance protein ABC transporter...   128   4e-28

>ref|XP_002320979.1| predicted protein [Populus trichocarpa] gi|222861752|gb|EEE99294.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score =  143 bits (361), Expect = 1e-32
 Identities = 77/136 (56%), Positives = 99/136 (72%), Gaps = 1/136 (0%)
 Frame = +2

Query: 53  MGNYISQEKFDMS-GKVVLSNGTVHEFDHPLTVAELMLEHPQEVVVEFHSLVAGNKLTPL 229
           MGN I+      S G+V+LS+G V EFD PLTVAELMLE+PQ+VVVEFHS +   +  PL
Sbjct: 1   MGNCITYHNSSNSAGRVILSDGRVCEFDKPLTVAELMLEYPQQVVVEFHSYLTEKRPPPL 60

Query: 230 PADKKLDMKKVYLMIPMKIGRAGTLPVNEARRILQDANNVLRSRALLASTRILPLFFQGC 409
           PADKKL+M K+YLM+PMK G+  +L   EARR+L  AN+VLRSR+ L+S+R LPLF   C
Sbjct: 61  PADKKLEM-KLYLMLPMKPGKPASLSSEEARRVLLSANSVLRSRSSLSSSRFLPLFAMMC 119

Query: 410 KTGVGVESNVVLHRKD 457
             GVG E  +V+ +K+
Sbjct: 120 PAGVGEEQKLVMRKKE 135


>ref|XP_002275655.1| PREDICTED: uncharacterized protein LOC100258949 [Vitis vinifera]
          Length = 196

 Score =  143 bits (360), Expect = 2e-32
 Identities = 76/137 (55%), Positives = 100/137 (72%), Gaps = 2/137 (1%)
 Frame = +2

Query: 53  MGNYISQEKFDMSGKVVLSNGTVHEFDHPLTVAELMLEHPQEVVVEFHSLVA--GNKLTP 226
           MGNY+S      +GK+VLS+G+VHEF  P+TVAELMLEHPQ+VVVE +S     G + +P
Sbjct: 1   MGNYVSFRSCSAAGKIVLSDGSVHEFIKPVTVAELMLEHPQQVVVELNSGKGSGGKRPSP 60

Query: 227 LPADKKLDMKKVYLMIPMKIGRAGTLPVNEARRILQDANNVLRSRALLASTRILPLFFQG 406
           LPAD KL+M KVYLM+PMK GRA TL   EARR+L  A++VL+S++ L+S+R+LP F + 
Sbjct: 61  LPADMKLEMGKVYLMLPMKRGRAVTLSSEEARRVLLRASSVLQSQSFLSSSRLLPFFAKI 120

Query: 407 CKTGVGVESNVVLHRKD 457
           C  G G     VL+RK+
Sbjct: 121 CPAGTGDGPGYVLNRKE 137


>ref|XP_002301506.1| multidrug resistance protein ABC transporter family protein
           [Populus trichocarpa] gi|222843232|gb|EEE80779.1|
           multidrug resistance protein ABC transporter family
           protein [Populus trichocarpa]
          Length = 197

 Score =  142 bits (359), Expect = 2e-32
 Identities = 75/139 (53%), Positives = 98/139 (70%), Gaps = 4/139 (2%)
 Frame = +2

Query: 53  MGNYI----SQEKFDMSGKVVLSNGTVHEFDHPLTVAELMLEHPQEVVVEFHSLVAGNKL 220
           MGNYI    S      +G+V+L +G V EFD PLT AELMLE+PQ+VVVEFHS     + 
Sbjct: 1   MGNYITFPNSSNSAAGTGRVILWDGKVFEFDTPLTAAELMLEYPQQVVVEFHSDFTEKRP 60

Query: 221 TPLPADKKLDMKKVYLMIPMKIGRAGTLPVNEARRILQDANNVLRSRALLASTRILPLFF 400
            PLPADK+LD+KKVYLM+P+K G+  +L   EARR+L  AN+VLRSR+LL+S+R  PLF 
Sbjct: 61  APLPADKRLDLKKVYLMLPIKRGKPASLSSGEARRVLLSANSVLRSRSLLSSSRFFPLFA 120

Query: 401 QGCKTGVGVESNVVLHRKD 457
           + C +G G E   V+ +K+
Sbjct: 121 RICPSGTGEEQIFVMQKKE 139


>ref|XP_002515299.1| conserved hypothetical protein [Ricinus communis]
           gi|223545779|gb|EEF47283.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 191

 Score =  142 bits (357), Expect = 4e-32
 Identities = 76/136 (55%), Positives = 97/136 (71%)
 Frame = +2

Query: 53  MGNYISQEKFDMSGKVVLSNGTVHEFDHPLTVAELMLEHPQEVVVEFHSLVAGNKLTPLP 232
           MGNYI+    + +GKV+L +GTVH FD  LTVAELMLE+PQ+VVVEF   ++  +  PLP
Sbjct: 1   MGNYITSRSSNATGKVILPDGTVHAFDKSLTVAELMLEYPQQVVVEFQQNLSEKRPAPLP 60

Query: 233 ADKKLDMKKVYLMIPMKIGRAGTLPVNEARRILQDANNVLRSRALLASTRILPLFFQGCK 412
           ADKKL+ KKVYL++PMK G+   L   EAR++L  AN+VLRSR+LL+S+R LPLF + C 
Sbjct: 61  ADKKLEAKKVYLILPMKRGKILPLSSEEARQVLSGANSVLRSRSLLSSSRFLPLFARICP 120

Query: 413 TGVGVESNVVLHRKDG 460
            GV      VL  KDG
Sbjct: 121 AGVEGGHKFVL-EKDG 135


>ref|XP_003591419.1| Multidrug resistance protein ABC transporter family protein
           [Medicago truncatula] gi|355480467|gb|AES61670.1|
           Multidrug resistance protein ABC transporter family
           protein [Medicago truncatula]
          Length = 192

 Score =  128 bits (322), Expect = 4e-28
 Identities = 66/126 (52%), Positives = 85/126 (67%)
 Frame = +2

Query: 53  MGNYISQEKFDMSGKVVLSNGTVHEFDHPLTVAELMLEHPQEVVVEFHSLVAGNKLTPLP 232
           MGN +S    D +GKVV  +G+VHEFD  +TVAELM++HPQ+VVVEFHS V   + TPLP
Sbjct: 1   MGNQVSFRPSDPTGKVVFLDGSVHEFDEAITVAELMMDHPQKVVVEFHSAVNQKRPTPLP 60

Query: 233 ADKKLDMKKVYLMIPMKIGRAGTLPVNEARRILQDANNVLRSRALLASTRILPLFFQGCK 412
           ADKKLDM K+YLM+P+K G+   L   E RR+L   N++L S  +L S++ LP F   C 
Sbjct: 61  ADKKLDMNKIYLMLPVKQGKPIGLSGEETRRVLLMVNSILNSNYVLCSSKFLPWFSSLCH 120

Query: 413 TGVGVE 430
               VE
Sbjct: 121 NSEIVE 126


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