BLASTX nr result
ID: Coptis24_contig00016752
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00016752 (465 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002320979.1| predicted protein [Populus trichocarpa] gi|2... 143 1e-32 ref|XP_002275655.1| PREDICTED: uncharacterized protein LOC100258... 143 2e-32 ref|XP_002301506.1| multidrug resistance protein ABC transporter... 142 2e-32 ref|XP_002515299.1| conserved hypothetical protein [Ricinus comm... 142 4e-32 ref|XP_003591419.1| Multidrug resistance protein ABC transporter... 128 4e-28 >ref|XP_002320979.1| predicted protein [Populus trichocarpa] gi|222861752|gb|EEE99294.1| predicted protein [Populus trichocarpa] Length = 194 Score = 143 bits (361), Expect = 1e-32 Identities = 77/136 (56%), Positives = 99/136 (72%), Gaps = 1/136 (0%) Frame = +2 Query: 53 MGNYISQEKFDMS-GKVVLSNGTVHEFDHPLTVAELMLEHPQEVVVEFHSLVAGNKLTPL 229 MGN I+ S G+V+LS+G V EFD PLTVAELMLE+PQ+VVVEFHS + + PL Sbjct: 1 MGNCITYHNSSNSAGRVILSDGRVCEFDKPLTVAELMLEYPQQVVVEFHSYLTEKRPPPL 60 Query: 230 PADKKLDMKKVYLMIPMKIGRAGTLPVNEARRILQDANNVLRSRALLASTRILPLFFQGC 409 PADKKL+M K+YLM+PMK G+ +L EARR+L AN+VLRSR+ L+S+R LPLF C Sbjct: 61 PADKKLEM-KLYLMLPMKPGKPASLSSEEARRVLLSANSVLRSRSSLSSSRFLPLFAMMC 119 Query: 410 KTGVGVESNVVLHRKD 457 GVG E +V+ +K+ Sbjct: 120 PAGVGEEQKLVMRKKE 135 >ref|XP_002275655.1| PREDICTED: uncharacterized protein LOC100258949 [Vitis vinifera] Length = 196 Score = 143 bits (360), Expect = 2e-32 Identities = 76/137 (55%), Positives = 100/137 (72%), Gaps = 2/137 (1%) Frame = +2 Query: 53 MGNYISQEKFDMSGKVVLSNGTVHEFDHPLTVAELMLEHPQEVVVEFHSLVA--GNKLTP 226 MGNY+S +GK+VLS+G+VHEF P+TVAELMLEHPQ+VVVE +S G + +P Sbjct: 1 MGNYVSFRSCSAAGKIVLSDGSVHEFIKPVTVAELMLEHPQQVVVELNSGKGSGGKRPSP 60 Query: 227 LPADKKLDMKKVYLMIPMKIGRAGTLPVNEARRILQDANNVLRSRALLASTRILPLFFQG 406 LPAD KL+M KVYLM+PMK GRA TL EARR+L A++VL+S++ L+S+R+LP F + Sbjct: 61 LPADMKLEMGKVYLMLPMKRGRAVTLSSEEARRVLLRASSVLQSQSFLSSSRLLPFFAKI 120 Query: 407 CKTGVGVESNVVLHRKD 457 C G G VL+RK+ Sbjct: 121 CPAGTGDGPGYVLNRKE 137 >ref|XP_002301506.1| multidrug resistance protein ABC transporter family protein [Populus trichocarpa] gi|222843232|gb|EEE80779.1| multidrug resistance protein ABC transporter family protein [Populus trichocarpa] Length = 197 Score = 142 bits (359), Expect = 2e-32 Identities = 75/139 (53%), Positives = 98/139 (70%), Gaps = 4/139 (2%) Frame = +2 Query: 53 MGNYI----SQEKFDMSGKVVLSNGTVHEFDHPLTVAELMLEHPQEVVVEFHSLVAGNKL 220 MGNYI S +G+V+L +G V EFD PLT AELMLE+PQ+VVVEFHS + Sbjct: 1 MGNYITFPNSSNSAAGTGRVILWDGKVFEFDTPLTAAELMLEYPQQVVVEFHSDFTEKRP 60 Query: 221 TPLPADKKLDMKKVYLMIPMKIGRAGTLPVNEARRILQDANNVLRSRALLASTRILPLFF 400 PLPADK+LD+KKVYLM+P+K G+ +L EARR+L AN+VLRSR+LL+S+R PLF Sbjct: 61 APLPADKRLDLKKVYLMLPIKRGKPASLSSGEARRVLLSANSVLRSRSLLSSSRFFPLFA 120 Query: 401 QGCKTGVGVESNVVLHRKD 457 + C +G G E V+ +K+ Sbjct: 121 RICPSGTGEEQIFVMQKKE 139 >ref|XP_002515299.1| conserved hypothetical protein [Ricinus communis] gi|223545779|gb|EEF47283.1| conserved hypothetical protein [Ricinus communis] Length = 191 Score = 142 bits (357), Expect = 4e-32 Identities = 76/136 (55%), Positives = 97/136 (71%) Frame = +2 Query: 53 MGNYISQEKFDMSGKVVLSNGTVHEFDHPLTVAELMLEHPQEVVVEFHSLVAGNKLTPLP 232 MGNYI+ + +GKV+L +GTVH FD LTVAELMLE+PQ+VVVEF ++ + PLP Sbjct: 1 MGNYITSRSSNATGKVILPDGTVHAFDKSLTVAELMLEYPQQVVVEFQQNLSEKRPAPLP 60 Query: 233 ADKKLDMKKVYLMIPMKIGRAGTLPVNEARRILQDANNVLRSRALLASTRILPLFFQGCK 412 ADKKL+ KKVYL++PMK G+ L EAR++L AN+VLRSR+LL+S+R LPLF + C Sbjct: 61 ADKKLEAKKVYLILPMKRGKILPLSSEEARQVLSGANSVLRSRSLLSSSRFLPLFARICP 120 Query: 413 TGVGVESNVVLHRKDG 460 GV VL KDG Sbjct: 121 AGVEGGHKFVL-EKDG 135 >ref|XP_003591419.1| Multidrug resistance protein ABC transporter family protein [Medicago truncatula] gi|355480467|gb|AES61670.1| Multidrug resistance protein ABC transporter family protein [Medicago truncatula] Length = 192 Score = 128 bits (322), Expect = 4e-28 Identities = 66/126 (52%), Positives = 85/126 (67%) Frame = +2 Query: 53 MGNYISQEKFDMSGKVVLSNGTVHEFDHPLTVAELMLEHPQEVVVEFHSLVAGNKLTPLP 232 MGN +S D +GKVV +G+VHEFD +TVAELM++HPQ+VVVEFHS V + TPLP Sbjct: 1 MGNQVSFRPSDPTGKVVFLDGSVHEFDEAITVAELMMDHPQKVVVEFHSAVNQKRPTPLP 60 Query: 233 ADKKLDMKKVYLMIPMKIGRAGTLPVNEARRILQDANNVLRSRALLASTRILPLFFQGCK 412 ADKKLDM K+YLM+P+K G+ L E RR+L N++L S +L S++ LP F C Sbjct: 61 ADKKLDMNKIYLMLPVKQGKPIGLSGEETRRVLLMVNSILNSNYVLCSSKFLPWFSSLCH 120 Query: 413 TGVGVE 430 VE Sbjct: 121 NSEIVE 126