BLASTX nr result
ID: Coptis24_contig00016750
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00016750
(1738 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein lig... 649 0.0
emb|CBI19874.3| unnamed protein product [Vitis vinifera] 649 0.0
emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera] 644 0.0
gb|ACL14424.1| putative E3 ubiquitin ligase [Lotus japonicus] 578 e-162
sp|D1FP57.1|LIN2_LOTJA RecName: Full=Putative E3 ubiquitin-prote... 578 e-162
>ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
vinifera]
Length = 1494
Score = 649 bits (1674), Expect = 0.0
Identities = 352/580 (60%), Positives = 423/580 (72%), Gaps = 5/580 (0%)
Frame = -1
Query: 1732 SEYRDDDK--ESEAKTLKAPPNN-MKMNEGVGSRTKVKQSDKKDRIHSPPLFSPPIVXXX 1562
S+Y D +SE KT + ++ MKMN KV+ + ++ S FS
Sbjct: 344 SDYEPDSAYMDSEDKTYQVVSHSSMKMNIYKEMGPKVQPPKIRSQLPSSTSFSSTDSPKT 403
Query: 1561 XXXXXXXXXSLQCRRDSEPLLRLLSER-ITTTVSASLPVTPQLLNDSSISPADSDGETTE 1385
C + +LRLLS R + +TVS SLPV+P+L DSSIS ADSDGE E
Sbjct: 404 SLKISSPKSDSHCHKGPTSVLRLLSSRAMDSTVSTSLPVSPRLYKDSSISSADSDGEVIE 463
Query: 1384 RKKSCRKNSSFGRTSSFGN-NTQILENSYHNESEDEGXXXXXXXXXSGKLTPLNRPPKDY 1208
+SCRKN ++ S N N Q+ ENS NE+ DEG S KLTP +RPPKD+
Sbjct: 464 LPRSCRKNHGHNQSISHQNLNRQVSENSSLNEN-DEGSQSCISLPLSDKLTPRSRPPKDF 522
Query: 1207 ICPITSQLLSDPVTLETGQTYERKAIQEWLQRGNTTCPITRQPLSANALPKTNYVLKRLI 1028
+CPIT Q+ SD VTLETGQTYERKAIQEWL+RGNTTCPITRQPLSA++LPKTNYVLKRLI
Sbjct: 523 VCPITGQIFSDAVTLETGQTYERKAIQEWLKRGNTTCPITRQPLSASSLPKTNYVLKRLI 582
Query: 1027 TSWRDQYPDIAQEFSYSETPRASISSTSSREPQLESYISSAYSRPTPPLVDHCIIKKSNR 848
T+W++QYPD+AQEFSY ETPR S S S++E L S S + + P D C +K R
Sbjct: 583 TTWKEQYPDVAQEFSYPETPRNSFSPPSTKEIMLAS--SPSCNPPDHKKSDDCTNQKCKR 640
Query: 847 FANGRQAVVSMSPTSVITQAAAEAIINGIKPYTSCLCTSEDLQECEAAVLKIARAWKDSK 668
F Q VVS SPTSVI+QAA EA+ING+KPY CLC S+DLQECEAAVL IA+ WKDSK
Sbjct: 641 FM---QTVVSTSPTSVISQAATEAVINGLKPYVLCLCNSDDLQECEAAVLAIAKMWKDSK 697
Query: 667 GDPGLHSLLSKPTVVNGFAEILLASVNREVLRTSVYVLSDLIFADERVGETLTSVDSDFD 488
DPG+HS LS+PT+VNG EIL AS+NREVLRTS+++LS LIFADE VGETLT+VDSDFD
Sbjct: 698 ADPGIHSYLSEPTIVNGLVEILSASMNREVLRTSIHILSVLIFADESVGETLTNVDSDFD 757
Query: 487 CLAALLKNGLAEAVVLIYQLRPSYAQLSVQDLVPSLVQVILNRTEELDDFQLVMNPKDAA 308
CLAALLK GLAEA VLIYQLRP++ QLS ++ +PSLV +ILN+ +E D+ LVM PKDAA
Sbjct: 758 CLAALLKKGLAEAAVLIYQLRPAFTQLSARNFIPSLVHLILNKNDESDNLLLVMEPKDAA 817
Query: 307 VALLEQILIGGDENSRSLNALGVISTNGLPYLIKCLDRFEARRSVVSILLCCMRTDRSSR 128
+ALLEQIL+GGDENSRSLNA+ VIS NG+P LIKCLD+ E R+++VSILLCC+ DRS R
Sbjct: 818 IALLEQILMGGDENSRSLNAMSVISANGIPALIKCLDKVEGRQAIVSILLCCIHADRSCR 877
Query: 127 NLIASRVQLAPVLELFHSGDDCVRGICIDFLSELVCLNRR 8
NLIA+R+ L+ VLELFH+GDD VRGIC FLSELV LNRR
Sbjct: 878 NLIANRIDLSSVLELFHTGDDYVRGICTKFLSELVQLNRR 917
>emb|CBI19874.3| unnamed protein product [Vitis vinifera]
Length = 1510
Score = 649 bits (1674), Expect = 0.0
Identities = 352/580 (60%), Positives = 423/580 (72%), Gaps = 5/580 (0%)
Frame = -1
Query: 1732 SEYRDDDK--ESEAKTLKAPPNN-MKMNEGVGSRTKVKQSDKKDRIHSPPLFSPPIVXXX 1562
S+Y D +SE KT + ++ MKMN KV+ + ++ S FS
Sbjct: 360 SDYEPDSAYMDSEDKTYQVVSHSSMKMNIYKEMGPKVQPPKIRSQLPSSTSFSSTDSPKT 419
Query: 1561 XXXXXXXXXSLQCRRDSEPLLRLLSER-ITTTVSASLPVTPQLLNDSSISPADSDGETTE 1385
C + +LRLLS R + +TVS SLPV+P+L DSSIS ADSDGE E
Sbjct: 420 SLKISSPKSDSHCHKGPTSVLRLLSSRAMDSTVSTSLPVSPRLYKDSSISSADSDGEVIE 479
Query: 1384 RKKSCRKNSSFGRTSSFGN-NTQILENSYHNESEDEGXXXXXXXXXSGKLTPLNRPPKDY 1208
+SCRKN ++ S N N Q+ ENS NE+ DEG S KLTP +RPPKD+
Sbjct: 480 LPRSCRKNHGHNQSISHQNLNRQVSENSSLNEN-DEGSQSCISLPLSDKLTPRSRPPKDF 538
Query: 1207 ICPITSQLLSDPVTLETGQTYERKAIQEWLQRGNTTCPITRQPLSANALPKTNYVLKRLI 1028
+CPIT Q+ SD VTLETGQTYERKAIQEWL+RGNTTCPITRQPLSA++LPKTNYVLKRLI
Sbjct: 539 VCPITGQIFSDAVTLETGQTYERKAIQEWLKRGNTTCPITRQPLSASSLPKTNYVLKRLI 598
Query: 1027 TSWRDQYPDIAQEFSYSETPRASISSTSSREPQLESYISSAYSRPTPPLVDHCIIKKSNR 848
T+W++QYPD+AQEFSY ETPR S S S++E L S S + + P D C +K R
Sbjct: 599 TTWKEQYPDVAQEFSYPETPRNSFSPPSTKEIMLAS--SPSCNPPDHKKSDDCTNQKCKR 656
Query: 847 FANGRQAVVSMSPTSVITQAAAEAIINGIKPYTSCLCTSEDLQECEAAVLKIARAWKDSK 668
F Q VVS SPTSVI+QAA EA+ING+KPY CLC S+DLQECEAAVL IA+ WKDSK
Sbjct: 657 FM---QTVVSTSPTSVISQAATEAVINGLKPYVLCLCNSDDLQECEAAVLAIAKMWKDSK 713
Query: 667 GDPGLHSLLSKPTVVNGFAEILLASVNREVLRTSVYVLSDLIFADERVGETLTSVDSDFD 488
DPG+HS LS+PT+VNG EIL AS+NREVLRTS+++LS LIFADE VGETLT+VDSDFD
Sbjct: 714 ADPGIHSYLSEPTIVNGLVEILSASMNREVLRTSIHILSVLIFADESVGETLTNVDSDFD 773
Query: 487 CLAALLKNGLAEAVVLIYQLRPSYAQLSVQDLVPSLVQVILNRTEELDDFQLVMNPKDAA 308
CLAALLK GLAEA VLIYQLRP++ QLS ++ +PSLV +ILN+ +E D+ LVM PKDAA
Sbjct: 774 CLAALLKKGLAEAAVLIYQLRPAFTQLSARNFIPSLVHLILNKNDESDNLLLVMEPKDAA 833
Query: 307 VALLEQILIGGDENSRSLNALGVISTNGLPYLIKCLDRFEARRSVVSILLCCMRTDRSSR 128
+ALLEQIL+GGDENSRSLNA+ VIS NG+P LIKCLD+ E R+++VSILLCC+ DRS R
Sbjct: 834 IALLEQILMGGDENSRSLNAMSVISANGIPALIKCLDKVEGRQAIVSILLCCIHADRSCR 893
Query: 127 NLIASRVQLAPVLELFHSGDDCVRGICIDFLSELVCLNRR 8
NLIA+R+ L+ VLELFH+GDD VRGIC FLSELV LNRR
Sbjct: 894 NLIANRIDLSSVLELFHTGDDYVRGICTKFLSELVQLNRR 933
>emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]
Length = 1494
Score = 644 bits (1660), Expect = 0.0
Identities = 350/580 (60%), Positives = 421/580 (72%), Gaps = 5/580 (0%)
Frame = -1
Query: 1732 SEYRDDDK--ESEAKTLKAPPNN-MKMNEGVGSRTKVKQSDKKDRIHSPPLFSPPIVXXX 1562
S+Y D +SE KT + ++ MKMN KV+ + ++ S FS
Sbjct: 344 SDYEPDSAYMDSEDKTYQVVSHSSMKMNIYKEMGPKVQPPKIRSQLPSSTSFSSTDSPKT 403
Query: 1561 XXXXXXXXXSLQCRRDSEPLLRLLSER-ITTTVSASLPVTPQLLNDSSISPADSDGETTE 1385
+ +LRLLS R + +TVS SLPV+P+L DSSIS ADSDGE E
Sbjct: 404 SLKISSPKSDSHXHKGPTSVLRLLSSRAMDSTVSTSLPVSPRLYKDSSISSADSDGEVIE 463
Query: 1384 RKKSCRKNSSFGRTSSFGN-NTQILENSYHNESEDEGXXXXXXXXXSGKLTPLNRPPKDY 1208
+SCRKN ++ S N N Q+ ENS NE+ DEG S KLTP +RPPKD+
Sbjct: 464 LPRSCRKNHGHNQSISHQNLNRQVSENSSLNEN-DEGSQSCISLPLSDKLTPRSRPPKDF 522
Query: 1207 ICPITSQLLSDPVTLETGQTYERKAIQEWLQRGNTTCPITRQPLSANALPKTNYVLKRLI 1028
+CPIT Q+ SD VTLETGQTYERKAIQEWL+RGNTTCPITRQPLSA++LPKTNYVLKRLI
Sbjct: 523 VCPITGQIFSDAVTLETGQTYERKAIQEWLKRGNTTCPITRQPLSASSLPKTNYVLKRLI 582
Query: 1027 TSWRDQYPDIAQEFSYSETPRASISSTSSREPQLESYISSAYSRPTPPLVDHCIIKKSNR 848
T+W++QYPD+AQEFSY ETPR S S S++E L S S + + P D C +K R
Sbjct: 583 TTWKEQYPDVAQEFSYPETPRNSFSPPSTKEIMLAS--SPSCNPPDHKKSDDCTNQKCKR 640
Query: 847 FANGRQAVVSMSPTSVITQAAAEAIINGIKPYTSCLCTSEDLQECEAAVLKIARAWKDSK 668
F Q VVS SPTSVI+QAA EA+ING+KPY CLC S+DLQECE AVL IA+ WKDSK
Sbjct: 641 FM---QTVVSTSPTSVISQAATEAVINGLKPYVLCLCNSDDLQECEVAVLAIAKMWKDSK 697
Query: 667 GDPGLHSLLSKPTVVNGFAEILLASVNREVLRTSVYVLSDLIFADERVGETLTSVDSDFD 488
DPG+HS LS+PT+VNG EIL AS+NREVLRTS+++LS LIFADE VGETLT+VDSDFD
Sbjct: 698 ADPGIHSYLSEPTIVNGLVEILSASMNREVLRTSIHILSVLIFADESVGETLTNVDSDFD 757
Query: 487 CLAALLKNGLAEAVVLIYQLRPSYAQLSVQDLVPSLVQVILNRTEELDDFQLVMNPKDAA 308
CLAALLK GLAEA VLIYQLRP++ QLS ++ +PSLV +ILN+ +E D+ LVM PKDAA
Sbjct: 758 CLAALLKKGLAEAAVLIYQLRPAFTQLSARNFIPSLVHLILNKNDESDNLLLVMEPKDAA 817
Query: 307 VALLEQILIGGDENSRSLNALGVISTNGLPYLIKCLDRFEARRSVVSILLCCMRTDRSSR 128
+ALLEQIL+GGDENSRSLNA+ VIS NG+P LIKCLD+ E R+++VSILLCC+ DRS R
Sbjct: 818 IALLEQILMGGDENSRSLNAMSVISANGIPALIKCLDKVEGRQAIVSILLCCIHADRSCR 877
Query: 127 NLIASRVQLAPVLELFHSGDDCVRGICIDFLSELVCLNRR 8
NLIA+R+ L+ VLELFH+GDD VRGIC FLSELV LNRR
Sbjct: 878 NLIANRIDLSSVLELFHTGDDYVRGICTKFLSELVQLNRR 917
>gb|ACL14424.1| putative E3 ubiquitin ligase [Lotus japonicus]
Length = 1485
Score = 578 bits (1490), Expect = e-162
Identities = 321/580 (55%), Positives = 406/580 (70%), Gaps = 8/580 (1%)
Frame = -1
Query: 1720 DDDKESEAKTLKAPPNN------MKMNEGVGSRTKVKQSDKKDRIHSPPLFSPPIVXXXX 1559
D D E + +++ + N MKM + G TKV S ++++I SP +FSP
Sbjct: 342 DSDSELDNESVDSDDKNNIFSPGMKMMKYEGVETKVDLSCQRNQIPSPDIFSPLDSPRTA 401
Query: 1558 XXXXXXXXSLQCRRDSEPLLRLLSERITT-TVSASLPVTPQLLNDSSISPADSDGETTER 1382
+ +RDS+ LRL S RI T+S SL +P + D+ +++D E R
Sbjct: 402 PNNSSPNPDMHSKRDSK-FLRLSSSRIREPTISDSLTSSPDISIDNI---SNADNEVMVR 457
Query: 1381 KKSCRKNSSFGRTSSFGN-NTQILENSYHNESEDEGXXXXXXXXXSGKLTPLNRPPKDYI 1205
RKN S + + N N+ +L +S H ESED G KL+ ++PPKD++
Sbjct: 458 NNIKRKNDSQTPSMNQDNENSLVLNDSSHCESED-GYQSSSSLPKLEKLSMGSKPPKDFV 516
Query: 1204 CPITSQLLSDPVTLETGQTYERKAIQEWLQRGNTTCPITRQPLSANALPKTNYVLKRLIT 1025
CPIT Q+ DPVTLETGQTYERKAIQEWL+ GNTTCPITRQPLSA+ LPKTNYVLKRLIT
Sbjct: 517 CPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLSASILPKTNYVLKRLIT 576
Query: 1024 SWRDQYPDIAQEFSYSETPRASISSTSSREPQLESYISSAYSRPTPPLVDHCIIKKSNRF 845
SW++Q P++AQEFS TPR S S S+++ + S P D+ ++SNRF
Sbjct: 577 SWKEQNPELAQEFSNVNTPRGSSCSPSAKDIPMLSTRQRTTDSPNHKNKDYAR-QRSNRF 635
Query: 844 ANGRQAVVSMSPTSVITQAAAEAIINGIKPYTSCLCTSEDLQECEAAVLKIARAWKDSKG 665
A ++ SPTSV++QAA E I+N +KPY S LCTSE+L ECE AVLKIAR KDSK
Sbjct: 636 M---PAAITTSPTSVLSQAAVETIVNSLKPYISSLCTSENLPECEEAVLKIARLLKDSKT 692
Query: 664 DPGLHSLLSKPTVVNGFAEILLASVNREVLRTSVYVLSDLIFADERVGETLTSVDSDFDC 485
+P +HS LSKPT++NG EIL AS NREVLRTS+Y+LS+LIF D+ V ETL SVDSDFDC
Sbjct: 693 NPQIHSYLSKPTIINGLVEILSASRNREVLRTSIYILSELIFTDDSVAETLNSVDSDFDC 752
Query: 484 LAALLKNGLAEAVVLIYQLRPSYAQLSVQDLVPSLVQVILNRTEELDDFQLVMNPKDAAV 305
LA LLKNGLAEA +LIYQLRP +AQLS +L+PSLV VI N+ EELDDFQLV++PKDAA+
Sbjct: 753 LATLLKNGLAEAALLIYQLRPVFAQLSAHELIPSLVDVIQNKNEELDDFQLVIDPKDAAI 812
Query: 304 ALLEQILIGGDENSRSLNALGVISTNGLPYLIKCLDRFEARRSVVSILLCCMRTDRSSRN 125
A+LEQ L+GGDE SRSLNA VIS NG+P L+K L+R E RRSVVS+LLCCM+ ++S +N
Sbjct: 813 AILEQTLMGGDEYSRSLNASSVISANGIPTLVKYLERMEGRRSVVSVLLCCMQAEKSCKN 872
Query: 124 LIASRVQLAPVLELFHSGDDCVRGICIDFLSELVCLNRRT 5
LIA+R++L+PVLELFHSG+D VRG C++FLSELV LNRRT
Sbjct: 873 LIANRIELSPVLELFHSGNDSVRGTCVEFLSELVQLNRRT 912
>sp|D1FP57.1|LIN2_LOTJA RecName: Full=Putative E3 ubiquitin-protein ligase LIN-2; Short=LjLIN
gi|219522098|gb|ACL14423.1| putative E3 ubiquitin ligase
[Lotus japonicus]
Length = 1485
Score = 578 bits (1490), Expect = e-162
Identities = 321/580 (55%), Positives = 406/580 (70%), Gaps = 8/580 (1%)
Frame = -1
Query: 1720 DDDKESEAKTLKAPPNN------MKMNEGVGSRTKVKQSDKKDRIHSPPLFSPPIVXXXX 1559
D D E + +++ + N MKM + G TKV S ++++I SP +FSP
Sbjct: 342 DSDSELDNESVDSDDKNNIFSPGMKMMKYEGVETKVDLSCQRNQIPSPDIFSPLDSPRTA 401
Query: 1558 XXXXXXXXSLQCRRDSEPLLRLLSERITT-TVSASLPVTPQLLNDSSISPADSDGETTER 1382
+ +RDS+ LRL S RI T+S SL +P + D+ +++D E R
Sbjct: 402 PNNSSPNPDMHSKRDSK-FLRLSSSRIREPTISDSLTSSPDISIDNI---SNADNEVMVR 457
Query: 1381 KKSCRKNSSFGRTSSFGN-NTQILENSYHNESEDEGXXXXXXXXXSGKLTPLNRPPKDYI 1205
RKN S + + N N+ +L +S H ESED G KL+ ++PPKD++
Sbjct: 458 NNIKRKNDSQTPSMNQDNENSLVLNDSSHCESED-GYQSSSSLPKLEKLSMGSKPPKDFV 516
Query: 1204 CPITSQLLSDPVTLETGQTYERKAIQEWLQRGNTTCPITRQPLSANALPKTNYVLKRLIT 1025
CPIT Q+ DPVTLETGQTYERKAIQEWL+ GNTTCPITRQPLSA+ LPKTNYVLKRLIT
Sbjct: 517 CPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLSASILPKTNYVLKRLIT 576
Query: 1024 SWRDQYPDIAQEFSYSETPRASISSTSSREPQLESYISSAYSRPTPPLVDHCIIKKSNRF 845
SW++Q P++AQEFS TPR S S S+++ + S P D+ ++SNRF
Sbjct: 577 SWKEQNPELAQEFSNVNTPRGSSCSPSAKDIPMLSTRQRTTDSPNHKNKDYAR-QRSNRF 635
Query: 844 ANGRQAVVSMSPTSVITQAAAEAIINGIKPYTSCLCTSEDLQECEAAVLKIARAWKDSKG 665
A ++ SPTSV++QAA E I+N +KPY S LCTSE+L ECE AVLKIAR KDSK
Sbjct: 636 M---PAAITTSPTSVLSQAAVETIVNSLKPYISSLCTSENLPECEEAVLKIARLLKDSKT 692
Query: 664 DPGLHSLLSKPTVVNGFAEILLASVNREVLRTSVYVLSDLIFADERVGETLTSVDSDFDC 485
+P +HS LSKPT++NG EIL AS NREVLRTS+Y+LS+LIF D+ V ETL SVDSDFDC
Sbjct: 693 NPQIHSYLSKPTIINGLVEILSASRNREVLRTSIYILSELIFTDDSVAETLNSVDSDFDC 752
Query: 484 LAALLKNGLAEAVVLIYQLRPSYAQLSVQDLVPSLVQVILNRTEELDDFQLVMNPKDAAV 305
LA LLKNGLAEA +LIYQLRP +AQLS +L+PSLV VI N+ EELDDFQLV++PKDAA+
Sbjct: 753 LATLLKNGLAEAALLIYQLRPVFAQLSAHELIPSLVDVIQNKNEELDDFQLVIDPKDAAI 812
Query: 304 ALLEQILIGGDENSRSLNALGVISTNGLPYLIKCLDRFEARRSVVSILLCCMRTDRSSRN 125
A+LEQ L+GGDE SRSLNA VIS NG+P L+K L+R E RRSVVS+LLCCM+ ++S +N
Sbjct: 813 AILEQTLMGGDEYSRSLNASSVISANGIPTLVKYLERMEGRRSVVSVLLCCMQAEKSCKN 872
Query: 124 LIASRVQLAPVLELFHSGDDCVRGICIDFLSELVCLNRRT 5
LIA+R++L+PVLELFHSG+D VRG C++FLSELV LNRRT
Sbjct: 873 LIANRIELSPVLELFHSGNDSVRGTCVEFLSELVQLNRRT 912