BLASTX nr result

ID: Coptis24_contig00016728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016728
         (1323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282849.2| PREDICTED: uncharacterized protein LOC100257...   179   2e-42
ref|XP_002316801.1| predicted protein [Populus trichocarpa] gi|2...   174   4e-41
ref|XP_002523264.1| hypothetical protein RCOM_0649410 [Ricinus c...   168   3e-39
ref|XP_002300403.1| predicted protein [Populus trichocarpa] gi|2...   164   5e-38
ref|XP_002333950.1| predicted protein [Populus trichocarpa] gi|2...   164   5e-38

>ref|XP_002282849.2| PREDICTED: uncharacterized protein LOC100257171 [Vitis vinifera]
          Length = 741

 Score =  179 bits (453), Expect = 2e-42
 Identities = 121/284 (42%), Positives = 138/284 (48%), Gaps = 14/284 (4%)
 Frame = -1

Query: 1200 PGR-NREQQPSIXXXXXXXXXXXSNGSMKGGGQASPMFPXXXXXXXXSFETAEPSSPKVT 1024
            PGR ++ ++P I           SNGSMKGG Q+SPMFP        +FE  EPSSPKVT
Sbjct: 47   PGRTDKLREPQISLSSSLSRRLRSNGSMKGG-QSSPMFPAAGKKRGCAFENPEPSSPKVT 105

Query: 1023 CIGQVXXXXXXXXXXXXXXXRSLRKGEVSFRKNEQAQDGIHHSQQQECLPHRNQRWVHLP 844
            CIGQV                S R+GEVSFRK +   +G       ECLPHRNQRWVHLP
Sbjct: 106  CIGQVRVKTKKQGKKMRSR--SKRRGEVSFRKLDHTAEG------GECLPHRNQRWVHLP 157

Query: 843  LSICETLRGFGSEFNCFTPCXXXXXXXXXXSCLCTS---------EXXXXXXXXXXXXXX 691
            L+ICE LR FG+EFNCF PC             CTS                        
Sbjct: 158  LTICEALRAFGAEFNCFLPCRSS----------CTSGEREKEEKGTGESGCGGGGGGGAS 207

Query: 690  XXSCGAVFARWLFAMEESEEKGKDREIQSVC----XXXXXXXXXXXXXXXXXXXXXXXXX 523
              SCGAVFARWL A++E E   K REI+ V                              
Sbjct: 208  TSSCGAVFARWLVALQEGE---KGREIELVVGEDERAMEGFQRRHVLDDIEIKLEEGEVK 264

Query: 522  XXXXXXXXXXESICVPPKNALLLMRSRSAPFRMSSLANRFWESP 391
                       SIC+PPKNALLLMR RS P RM++LANRFWESP
Sbjct: 265  DEAVGGEEARVSICIPPKNALLLMRCRSDPMRMAALANRFWESP 308


>ref|XP_002316801.1| predicted protein [Populus trichocarpa] gi|222859866|gb|EEE97413.1|
            predicted protein [Populus trichocarpa]
          Length = 773

 Score =  174 bits (442), Expect = 4e-41
 Identities = 120/306 (39%), Positives = 145/306 (47%), Gaps = 27/306 (8%)
 Frame = -1

Query: 1200 PGRNREQQPSIXXXXXXXXXXXSNGSMKGGGQASPMFPXXXXXXXXSFETAEPSSPKVTC 1021
            PGR+R+    I           S+GSMKGG QASPMFP        +FE  EPSSPKVTC
Sbjct: 52   PGRHRDSS-QISLSNSLSRRLRSSGSMKGG-QASPMFPTNGKKRGCAFENPEPSSPKVTC 109

Query: 1020 IGQVXXXXXXXXXXXXXXXRSLRKGEVSFRKNEQAQDGI-----HHS-----------QQ 889
            IGQV                S R+GE+SFR+ +Q  +       HH            QQ
Sbjct: 110  IGQVRVKTKKQGKKLRTR--SKRRGEISFRRVDQNSNTFEGSNNHHDLINNQFLNQQQQQ 167

Query: 888  QECLPHRNQRWVHLPLSICETLRGFGSEFNCFTPCXXXXXXXXXXSCLCT-SEXXXXXXX 712
            QE L HRNQRWVH P++ICE LR FG+EFNCF PC          SC+ +  E       
Sbjct: 168  QEGLSHRNQRWVHFPVTICEALRAFGAEFNCFLPC--------RSSCMASEKEKEENTAA 219

Query: 711  XXXXXXXXXSCGAVFARWLFAMEESEEKGKDREI----------QSVCXXXXXXXXXXXX 562
                     SCGAVFARWL A++E E KGK+ E+          +               
Sbjct: 220  AGSNNNGSSSCGAVFARWLVAVQEGEGKGKEIELVVGEEVVEEERDERRRSYRRHIFEDI 279

Query: 561  XXXXXXXXXXXXXXXXXXXXXXXESICVPPKNALLLMRSRSAPFRMSSLANRFWESPATQ 382
                                    SIC+PPKNALLLMR RS P +M++LAN+FWESPA Q
Sbjct: 280  EFKEEEGHVFEGGNAGLQEEEARVSICIPPKNALLLMRCRSDPVKMAALANKFWESPAPQ 339

Query: 381  HNGSQE 364
                +E
Sbjct: 340  DEEDEE 345


>ref|XP_002523264.1| hypothetical protein RCOM_0649410 [Ricinus communis]
            gi|223537477|gb|EEF39103.1| hypothetical protein
            RCOM_0649410 [Ricinus communis]
          Length = 731

 Score =  168 bits (425), Expect = 3e-39
 Identities = 123/324 (37%), Positives = 145/324 (44%), Gaps = 45/324 (13%)
 Frame = -1

Query: 1200 PGRNREQQPSIXXXXXXXXXXXSNGSMKGGGQASPMFPXXXXXXXXS-FETAEPSSPKVT 1024
            PGR+RE    I           +NGSMKGG QASPMFP          FE  EPSSPKVT
Sbjct: 11   PGRSREPTSQISLSNSLSRRLRTNGSMKGG-QASPMFPTNNSGKKRGSFENPEPSSPKVT 69

Query: 1023 CIGQVXXXXXXXXXXXXXXXRSLRKG-EVSFRKNEQA-----------------QDGIHH 898
            CIGQV                  R G EVSFR+ +Q                  QD  H 
Sbjct: 70   CIGQVRVKTKKQGRKMRSSRSQRRGGGEVSFRRVDQTNNSNNTGNNFQVSSSTHQDFSHT 129

Query: 897  SQ---QQECLPHRNQRWVHLPLSICETLRGFGSEFNCFTPCXXXXXXXXXXSCLCTSE-- 733
             Q   Q ECLPHRNQRWVHLPL+ICE LR FG+EFNCF PC          SC+ + +  
Sbjct: 130  HQGNNQPECLPHRNQRWVHLPLTICEALRAFGAEFNCFLPC--------RSSCMASEKEK 181

Query: 732  -----XXXXXXXXXXXXXXXXSCGAVFARWLFAM----------------EESEEKGKDR 616
                                 SCGAVFARWL A+                EE EE+ ++ 
Sbjct: 182  QEKAAAGDGGGGGGGGSSEGSSCGAVFARWLMAVQEGDDRKRREIELVVGEEVEEEEEEE 241

Query: 615  EIQSVCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESICVPPKNALLLMRSRSA 436
            E +                                       SIC+PPKNALLLMR RS 
Sbjct: 242  EEEDFTERRRSYRRHVFEEIEFNEEKFGVGNESIQDEEAARVSICIPPKNALLLMRCRSD 301

Query: 435  PFRMSSLANRFWESPATQHNGSQE 364
            P +M++LAN+FWE+PA  +N +QE
Sbjct: 302  PVKMAALANKFWEAPA-PNNENQE 324


>ref|XP_002300403.1| predicted protein [Populus trichocarpa] gi|222847661|gb|EEE85208.1|
            predicted protein [Populus trichocarpa]
          Length = 730

 Score =  164 bits (415), Expect = 5e-38
 Identities = 108/274 (39%), Positives = 133/274 (48%), Gaps = 24/274 (8%)
 Frame = -1

Query: 1131 NGSMKGGGQASPMFPXXXXXXXXSFETAEPSSPKVTCIGQVXXXXXXXXXXXXXXXRSLR 952
            NGSMKGG  ASPMFP        +FE  EPSSPKVTCIGQV                S +
Sbjct: 31   NGSMKGG-HASPMFPTNGKKRGCAFENPEPSSPKVTCIGQVRVKTKKQGNKLRTR--SEK 87

Query: 951  KGEVSFRK---NEQAQDG------------IHHSQQQECLPHRNQRWVHLPLSICETLRG 817
            +GE+SFR+   N  A +G            ++  QQQE L  RN RWVHLP++ICE LR 
Sbjct: 88   RGEISFRRVDQNSNAFEGSNNHQDLINNQFLNQQQQQEDLSPRNPRWVHLPVTICEALRT 147

Query: 816  FGSEFNCFTPCXXXXXXXXXXSCLCTS---EXXXXXXXXXXXXXXXXSCGAVFARWLFAM 646
            FG+EFNCF PC             CT+   E                SCGAVFARWL A+
Sbjct: 148  FGAEFNCFLPCRSS----------CTASEKEKEEKAAAAGSNNNGSSSCGAVFARWLVAV 197

Query: 645  EESEEKGKD------REIQSVCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESI 484
            +E E KG++       E++                                       +I
Sbjct: 198  QEEEGKGREIELVVGEEVEEERDERRRSYRRHVYEEIEFKDEKFGGNEGLQEEEEARVNI 257

Query: 483  CVPPKNALLLMRSRSAPFRMSSLANRFWESPATQ 382
            C+PPKNALLLMR RS P +M++LAN+FWE+PA Q
Sbjct: 258  CIPPKNALLLMRCRSDPVKMAALANKFWEAPAPQ 291


>ref|XP_002333950.1| predicted protein [Populus trichocarpa] gi|222839181|gb|EEE77532.1|
            predicted protein [Populus trichocarpa]
          Length = 730

 Score =  164 bits (415), Expect = 5e-38
 Identities = 108/274 (39%), Positives = 133/274 (48%), Gaps = 24/274 (8%)
 Frame = -1

Query: 1131 NGSMKGGGQASPMFPXXXXXXXXSFETAEPSSPKVTCIGQVXXXXXXXXXXXXXXXRSLR 952
            NGSMKGG  ASPMFP        +FE  EPSSPKVTCIGQV                S +
Sbjct: 31   NGSMKGG-HASPMFPTNGKKRGCAFENPEPSSPKVTCIGQVRVKTKKQGNKLRTR--SEK 87

Query: 951  KGEVSFRK---NEQAQDG------------IHHSQQQECLPHRNQRWVHLPLSICETLRG 817
            +GE+SFR+   N  A +G            ++  QQQE L  RN RWVHLP++ICE LR 
Sbjct: 88   RGEISFRRVDQNSNAFEGSNNHQDLINNQFLNQQQQQEDLSPRNPRWVHLPVTICEALRT 147

Query: 816  FGSEFNCFTPCXXXXXXXXXXSCLCTS---EXXXXXXXXXXXXXXXXSCGAVFARWLFAM 646
            FG+EFNCF PC             CT+   E                SCGAVFARWL A+
Sbjct: 148  FGAEFNCFLPCRSS----------CTASEKEKEEKAAAAGSNNNGSSSCGAVFARWLVAV 197

Query: 645  EESEEKGKD------REIQSVCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESI 484
            +E E KG++       E++                                       +I
Sbjct: 198  QEEEGKGREIELVVGEEVEEERDERRRSYRRHVYEEIEFKDEKFGGNEGLQEEEEARVNI 257

Query: 483  CVPPKNALLLMRSRSAPFRMSSLANRFWESPATQ 382
            C+PPKNALLLMR RS P +M++LAN+FWE+PA Q
Sbjct: 258  CIPPKNALLLMRCRSDPVKMAALANKFWEAPAPQ 291


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