BLASTX nr result

ID: Coptis24_contig00016716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016716
         (1189 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276721.1| PREDICTED: phosphatidylinositol glycan ancho...   336   8e-90
ref|XP_002299558.1| predicted protein [Populus trichocarpa] gi|2...   330   4e-88
ref|XP_003525538.1| PREDICTED: phosphatidylinositol glycan ancho...   326   8e-87
ref|XP_003550876.1| PREDICTED: phosphatidylinositol glycan ancho...   325   1e-86
ref|XP_002509716.1| conserved hypothetical protein [Ricinus comm...   313   5e-83

>ref|XP_002276721.1| PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U
            protein [Vitis vinifera] gi|297742569|emb|CBI34718.3|
            unnamed protein product [Vitis vinifera]
          Length = 474

 Score =  336 bits (861), Expect = 8e-90
 Identities = 171/268 (63%), Positives = 192/268 (71%), Gaps = 14/268 (5%)
 Frame = -3

Query: 1187 WVTASHLSXXXXXXXXXXXXXXXXGPDAPSRKLFLQKGSRTNGNKP-------------- 1050
            WV A+HLS                GPD+P RKLF Q+ S   G  P              
Sbjct: 201  WVIATHLSLYPAILIVPLILILGYGPDSPRRKLFQQRASSKVGENPSTDIRYQQKELASQ 260

Query: 1049 PLAGRSFSWRPVIYFLLWAAIWAVYVLFLCSISLKQYGGLSEMFKRTHGFILTVEDLSPN 870
            P+    FSWR V++F+LWA++W+ YVL LC IS+++YGGL EMFK T+GFILTV DLSPN
Sbjct: 261  PMLPFRFSWRLVVHFILWASLWSCYVLLLCGISVRRYGGLGEMFKSTYGFILTVPDLSPN 320

Query: 869  IGVLWYXXXXXXXXXXXXXXXXXXVNILFMILPLAIRLNHRPCFLAFVYIAISSMLKSYP 690
            IGVLWY                  VNILFMILPLAIRLNHRPCFLAFVYIAISS+LKSYP
Sbjct: 321  IGVLWYFFAEVFDYFRNFFLIVFHVNILFMILPLAIRLNHRPCFLAFVYIAISSLLKSYP 380

Query: 689  SVGDPALYLALLGWFVTELAEMKFSFFLFCGYVGVTLLSPVMHNLWIWRGTGNANFYFAT 510
            SVGD ALYL LLG FV ELA+M+FSFFLFCGYVG++ LSPVMHNLWIWRGTGNANFYFAT
Sbjct: 381  SVGDSALYLGLLGLFVKELADMQFSFFLFCGYVGISFLSPVMHNLWIWRGTGNANFYFAT 440

Query: 509  AIGYACLQIILVVESVSAMLQHDRMIRK 426
            A+ YAC QIILVVESVSAML HDRM+RK
Sbjct: 441  AMAYACFQIILVVESVSAMLNHDRMLRK 468


>ref|XP_002299558.1| predicted protein [Populus trichocarpa] gi|222846816|gb|EEE84363.1|
            predicted protein [Populus trichocarpa]
          Length = 467

 Score =  330 bits (846), Expect = 4e-88
 Identities = 167/266 (62%), Positives = 192/266 (72%), Gaps = 12/266 (4%)
 Frame = -3

Query: 1187 WVTASHLSXXXXXXXXXXXXXXXXGPDAPSRKLFLQKGSRTNGNK------------PPL 1044
            WV ++HLS                GPD P RKLFLQKG   NG+                
Sbjct: 191  WVMSTHLSLYPAILIIPVILLLGYGPDTPPRKLFLQKGYGKNGDNHSSDNCGQQETNQSK 250

Query: 1043 AGRSFSWRPVIYFLLWAAIWAVYVLFLCSISLKQYGGLSEMFKRTHGFILTVEDLSPNIG 864
            A  +FSWRPVI+FL W+++W+ YVL LCSIS+K +G L EMF+RT+GFILT+ED+SPNIG
Sbjct: 251  AEVTFSWRPVIHFLFWSSLWSAYVLVLCSISVKPHGSLWEMFQRTYGFILTMEDMSPNIG 310

Query: 863  VLWYXXXXXXXXXXXXXXXXXXVNILFMILPLAIRLNHRPCFLAFVYIAISSMLKSYPSV 684
            VLWY                  +NILFMILPLAIRL HRPCFLAF+YIAISSMLKSYPSV
Sbjct: 311  VLWYFFAEVFDFFRSFFMIVFHLNILFMILPLAIRLKHRPCFLAFIYIAISSMLKSYPSV 370

Query: 683  GDPALYLALLGWFVTELAEMKFSFFLFCGYVGVTLLSPVMHNLWIWRGTGNANFYFATAI 504
            GD ALYL LLG F+ ELA+MKFSFFL CGY+GV+LLSPVMHNLWIWRGTGNANFY+AT +
Sbjct: 371  GDSALYLGLLGLFLDELADMKFSFFLLCGYIGVSLLSPVMHNLWIWRGTGNANFYYATGM 430

Query: 503  GYACLQIILVVESVSAMLQHDRMIRK 426
             YACLQIILVVESVSA+L HDR +RK
Sbjct: 431  AYACLQIILVVESVSAVLNHDRKLRK 456


>ref|XP_003525538.1| PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U
            protein-like [Glycine max]
          Length = 464

 Score =  326 bits (835), Expect = 8e-87
 Identities = 168/271 (61%), Positives = 185/271 (68%), Gaps = 13/271 (4%)
 Frame = -3

Query: 1187 WVTASHLSXXXXXXXXXXXXXXXXGPDAPSRKLFLQKGSRTNGNKPPLAGRS-------- 1032
            WV A+HLS                GPDAP RKLF Q+ +   GN  P    S        
Sbjct: 187  WVMATHLSLYPAILIIPVILLLGYGPDAPPRKLFCQRKNLEVGNSTPSDSCSEEEAKNQL 246

Query: 1031 -----FSWRPVIYFLLWAAIWAVYVLFLCSISLKQYGGLSEMFKRTHGFILTVEDLSPNI 867
                 FSWRPV++FL W  +W+ YVL LC I ++QYGGL E+FKRT+GFILT +DLSPNI
Sbjct: 247  KVANVFSWRPVVFFLFWTLLWSSYVLVLCGICVQQYGGLHELFKRTYGFILTTQDLSPNI 306

Query: 866  GVLWYXXXXXXXXXXXXXXXXXXVNILFMILPLAIRLNHRPCFLAFVYIAISSMLKSYPS 687
            GVLWY                   NIL MI PLA+RLNHRPCFLAFVYI ISSMLKSYPS
Sbjct: 307  GVLWYFFAEVFDFFRNFFLIVFHGNILLMIAPLALRLNHRPCFLAFVYIVISSMLKSYPS 366

Query: 686  VGDPALYLALLGWFVTELAEMKFSFFLFCGYVGVTLLSPVMHNLWIWRGTGNANFYFATA 507
            VGD ALYL LLG F  EL +M+FSFFLF GYVGV+LLSPVMHNLWIWRGTGNANFYFATA
Sbjct: 367  VGDSALYLGLLGLFAYELKDMQFSFFLFSGYVGVSLLSPVMHNLWIWRGTGNANFYFATA 426

Query: 506  IGYACLQIILVVESVSAMLQHDRMIRKQYNA 414
            I YACLQIILVVESVSAML HDR + K Y A
Sbjct: 427  IAYACLQIILVVESVSAMLNHDRKLTKLYTA 457


>ref|XP_003550876.1| PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U
            protein-like [Glycine max]
          Length = 468

 Score =  325 bits (834), Expect = 1e-86
 Identities = 167/271 (61%), Positives = 185/271 (68%), Gaps = 13/271 (4%)
 Frame = -3

Query: 1187 WVTASHLSXXXXXXXXXXXXXXXXGPDAPSRKLFLQKGSRTNGNKPPLAGRS-------- 1032
            WV A+HLS                GPDAP RKLF Q+ +   GN  P    S        
Sbjct: 191  WVMATHLSLYPAILIIPVILLLGYGPDAPPRKLFCQRKNLEGGNSIPSDSCSEEEAKNQL 250

Query: 1031 -----FSWRPVIYFLLWAAIWAVYVLFLCSISLKQYGGLSEMFKRTHGFILTVEDLSPNI 867
                 FSWRPV+ FL WA +W+ YVL LC I ++QYGGL E+FKRT+GFILT++DLSPNI
Sbjct: 251  KVANVFSWRPVVLFLFWALLWSSYVLVLCGIYVQQYGGLQELFKRTYGFILTIQDLSPNI 310

Query: 866  GVLWYXXXXXXXXXXXXXXXXXXVNILFMILPLAIRLNHRPCFLAFVYIAISSMLKSYPS 687
            GVLWY                   NIL MI PLA+RLNHRPCFLAFVYI ISSMLKSYPS
Sbjct: 311  GVLWYFFAEVFDFFRNFFLIVFHGNILLMIAPLALRLNHRPCFLAFVYIVISSMLKSYPS 370

Query: 686  VGDPALYLALLGWFVTELAEMKFSFFLFCGYVGVTLLSPVMHNLWIWRGTGNANFYFATA 507
            VGD ALYL LLG F  EL +M+FSFFLF GY+GV+LLSPVMHNLWIWRGTGNANFYFATA
Sbjct: 371  VGDSALYLGLLGLFAYELKDMQFSFFLFSGYIGVSLLSPVMHNLWIWRGTGNANFYFATA 430

Query: 506  IGYACLQIILVVESVSAMLQHDRMIRKQYNA 414
            I Y CLQIILVVESVSAML HDR + K Y A
Sbjct: 431  IAYVCLQIILVVESVSAMLNHDRKLTKLYTA 461


>ref|XP_002509716.1| conserved hypothetical protein [Ricinus communis]
            gi|223549615|gb|EEF51103.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 490

 Score =  313 bits (802), Expect = 5e-83
 Identities = 167/273 (61%), Positives = 188/273 (68%), Gaps = 19/273 (6%)
 Frame = -3

Query: 1187 WVTASHLSXXXXXXXXXXXXXXXXGPDAPSRKLFLQKGSRTN----------------GN 1056
            WV A+HLS                GPDAP +KLFLQK    N                 +
Sbjct: 207  WVMATHLSLYPTILIIPVILLLGCGPDAPPQKLFLQKEHCKNCDNFSSAPHEDEKIFNQS 266

Query: 1055 KPPLAGRSFSWRPVIYFLLWAAIWAVYVLFLCSISLKQYGGLSEM---FKRTHGFILTVE 885
            KP +     SWRPV+ FL WA +W++YVL LCSIS+KQYG L E      +T+GFILTVE
Sbjct: 267  KPQII---VSWRPVMLFLFWAFLWSIYVLVLCSISVKQYGSLWEXCFSHLQTYGFILTVE 323

Query: 884  DLSPNIGVLWYXXXXXXXXXXXXXXXXXXVNILFMILPLAIRLNHRPCFLAFVYIAISSM 705
            D+SPNIGVLWY                   NILFM+LPLAIRL HRPCFLAFVYIAISSM
Sbjct: 324  DMSPNIGVLWYFFAEVFDFFRNFFLIVFHTNILFMVLPLAIRLYHRPCFLAFVYIAISSM 383

Query: 704  LKSYPSVGDPALYLALLGWFVTELAEMKFSFFLFCGYVGVTLLSPVMHNLWIWRGTGNAN 525
            LKSYPSVGD ALY+ LLG F+ ELA+M+FSFF+FCGYVGV+LLSPVMHNLWIWRGTGNAN
Sbjct: 384  LKSYPSVGDSALYMGLLGLFLDELADMQFSFFIFCGYVGVSLLSPVMHNLWIWRGTGNAN 443

Query: 524  FYFATAIGYACLQIILVVESVSAMLQHDRMIRK 426
            FYFATAI YACLQIILVVESVSA+L HDR + K
Sbjct: 444  FYFATAIAYACLQIILVVESVSAVLNHDRKLTK 476


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