BLASTX nr result
ID: Coptis24_contig00016707
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00016707
(943 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273418.1| PREDICTED: uncharacterized protein LOC100267... 62 6e-19
ref|XP_002515247.1| conserved hypothetical protein [Ricinus comm... 63 2e-17
ref|XP_002312314.1| predicted protein [Populus trichocarpa] gi|2... 63 2e-16
emb|CBI36974.3| unnamed protein product [Vitis vinifera] 62 2e-15
emb|CBI39610.3| unnamed protein product [Vitis vinifera] 69 3e-15
>ref|XP_002273418.1| PREDICTED: uncharacterized protein LOC100267130 [Vitis vinifera]
gi|296083220|emb|CBI22856.3| unnamed protein product
[Vitis vinifera]
Length = 223
Score = 62.0 bits (149), Expect(2) = 6e-19
Identities = 38/66 (57%), Positives = 41/66 (62%)
Frame = +2
Query: 224 LDAADQKLVREISELAMLKRARVERXXXXXXXXXXXXLXXXXXXXXXXLCALVVTVLFCL 403
LDAADQKLVREI+ELAMLKRARVER + L A+V TV FCL
Sbjct: 97 LDAADQKLVREIAELAMLKRARVER------RKALRKMKVAKASSNSSLFAMVFTVFFCL 150
Query: 404 VILFQG 421
VILFQG
Sbjct: 151 VILFQG 156
Score = 58.9 bits (141), Expect(2) = 6e-19
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +1
Query: 496 FCRRFVAIGLFSRSNSHASFEGSPESARATRGPLISVQYYKNPAAGNINP-SSESPNLAE 672
FC + GL SR NS +F GSPESA T G LISVQYY + + ++ SESP+L E
Sbjct: 148 FCLVILFQGLSSRRNSAITFHGSPESAAPTEGGLISVQYYHSISPSDVKEHGSESPSLVE 207
Query: 673 QISRSDPQEENSRVAG 720
Q+ + +E+ + G
Sbjct: 208 QLPGLEAKEKAGKAPG 223
>ref|XP_002515247.1| conserved hypothetical protein [Ricinus communis]
gi|223545727|gb|EEF47231.1| conserved hypothetical
protein [Ricinus communis]
Length = 252
Score = 63.2 bits (152), Expect(2) = 2e-17
Identities = 47/145 (32%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Frame = +2
Query: 2 KYLGRVWSGVINVDGLIKD-EYGVRASNSVLNFSEKS----SGSEENVGLMXXXXXXXXX 166
K L VWSG + DGL+ ++G A+ +V K+ G ++N+G
Sbjct: 52 KLLNSVWSGRLGFDGLVNSSKFGDIANENVELLLGKNIEGKEGQQQNMGFGNKKVVEDKH 111
Query: 167 XXXXXXXXXXXXXXXXXXXLDAADQKLVREISELAMLKRARVERXXXXXXXXXXXXLXXX 346
LDAADQKLV+EI+ELAM KRAR+ER
Sbjct: 112 KKKNSRKAPKPPRPPKGPSLDAADQKLVQEITELAMRKRARMERIKALKKMR-----AAK 166
Query: 347 XXXXXXXLCALVVTVLFCLVILFQG 421
+ A+++T LFCLV++FQG
Sbjct: 167 SSSWNSSVYAMIITFLFCLVLIFQG 191
Score = 52.4 bits (124), Expect(2) = 2e-17
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +1
Query: 496 FCRRFVAIGLFSRSNSHASFEGSPESARATRGPLISVQYYKNPAAGNINPSSESPNLAE- 672
FC + G+ ++S+ +GSPE A A LIS+Q+YKNPA G P S SP+L+E
Sbjct: 183 FCLVLIFQGICAKSSRSMFLQGSPEPAVAASEDLISIQFYKNPAFGIDGPGSGSPSLSEG 242
Query: 673 QISRS 687
Q+S S
Sbjct: 243 QVSGS 247
>ref|XP_002312314.1| predicted protein [Populus trichocarpa] gi|222852134|gb|EEE89681.1|
predicted protein [Populus trichocarpa]
Length = 235
Score = 63.2 bits (152), Expect(2) = 2e-16
Identities = 36/66 (54%), Positives = 43/66 (65%)
Frame = +2
Query: 224 LDAADQKLVREISELAMLKRARVERXXXXXXXXXXXXLXXXXXXXXXXLCALVVTVLFCL 403
LDAADQKL++EISELAMLKRAR+ER L + A+V+T+LFCL
Sbjct: 111 LDAADQKLIKEISELAMLKRARIER------MKALKKLKATKPSSNNNIFAIVLTILFCL 164
Query: 404 VILFQG 421
VILFQG
Sbjct: 165 VILFQG 170
Score = 48.9 bits (115), Expect(2) = 2e-16
Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +1
Query: 496 FCRRFVAIGLFSRSNSHASFEGSPESARATRGPLISVQYYKNPAAGNIN-PSSESPNLAE 672
FC + G+ SR+ S AS GSP S+ LISVQY+ NP+A N P S PN E
Sbjct: 162 FCLVILFQGMSSRATS-ASSMGSPVSSETAGDGLISVQYFGNPSASESNGPGSGYPNFIE 220
Query: 673 QISRSDP 693
I+ SDP
Sbjct: 221 TIAGSDP 227
>emb|CBI36974.3| unnamed protein product [Vitis vinifera]
Length = 255
Score = 62.4 bits (150), Expect(2) = 2e-15
Identities = 49/154 (31%), Positives = 62/154 (40%), Gaps = 14/154 (9%)
Frame = +2
Query: 2 KYLGRVWSGVINVDGLIKDEYGVRASNSVLNF--------------SEKSSGSEENVGLM 139
K RV S V N DG +KDE GV +++ + S + S EN L
Sbjct: 40 KLFSRVGSEVWNFDGSVKDENGVNLIKNLVKYGNTADVNVELLIDISSRGEESRENSNLA 99
Query: 140 XXXXXXXXXXXXXXXXXXXXXXXXXXXXLDAADQKLVREISELAMLKRARVERXXXXXXX 319
LDAADQK VREISELAM +RAR+ER
Sbjct: 100 MKQYVNEKHKKTNSRKPPKPPRPPQGPLLDAADQKFVREISELAMRRRARIER----IKE 155
Query: 320 XXXXXLXXXXXXXXXXLCALVVTVLFCLVILFQG 421
L A+++T LF ++ILFQG
Sbjct: 156 MKKKKAAKASSMSSSSLSAMIITFLFFIIILFQG 189
Score = 47.0 bits (110), Expect(2) = 2e-15
Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +1
Query: 520 GLFSRSNSHASFEGSPESARATRGPLISVQYYKN-PAAGNINPSSESPNLAEQ 675
G+ SR++SH F+GSPE +R LISVQYYKN P + P S S + EQ
Sbjct: 189 GICSRASSHEGFQGSPEPVVNSRKSLISVQYYKNLPPNESNEPGSNSLDSVEQ 241
>emb|CBI39610.3| unnamed protein product [Vitis vinifera]
Length = 252
Score = 68.6 bits (166), Expect(2) = 3e-15
Identities = 46/149 (30%), Positives = 62/149 (41%), Gaps = 9/149 (6%)
Frame = +2
Query: 2 KYLGRVWSGVINVDGLIKDEYGVRASNSVLNFSEKSSGS---------EENVGLMXXXXX 154
K LGR WSG++ DG I+ V S LN+ S EE + +
Sbjct: 40 KTLGRAWSGIVGFDGCIRSADSVSICKSELNYGGACGNSVDSLVGGLGEEQMEFVGKKMN 99
Query: 155 XXXXXXXXXXXXXXXXXXXXXXXLDAADQKLVREISELAMLKRARVERXXXXXXXXXXXX 334
LDAAD K+VREI+ELAM+KRARVER
Sbjct: 100 KEKRKKIGSKKPSKPPRAPRGPSLDAADMKMVREITELAMMKRARVER-----MKALKMK 154
Query: 335 LXXXXXXXXXXLCALVVTVLFCLVILFQG 421
A+++T+LFC +++FQG
Sbjct: 155 TEKASSLSCSNFIAMIITILFCFILIFQG 183
Score = 39.7 bits (91), Expect(2) = 3e-15
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +1
Query: 496 FCRRFVAIGLFSRSNS-HASFEGSPESARATRGPLISVQYYKNPAAGNIN-PSSESPNLA 669
FC + G+ SRS+S + SF GSPE+ A G +IS+++ NP A N P S P+ A
Sbjct: 175 FCFILIFQGICSRSSSSNMSFHGSPET--AGDGGMISIEHSMNPPATETNGPGSGFPSYA 232
Query: 670 EQISRSDPQEENSR 711
E S ++ R
Sbjct: 233 ESASLQQAALQDGR 246