BLASTX nr result
ID: Coptis24_contig00016696
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00016696 (231 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN80487.1| hypothetical protein VITISV_043198 [Vitis vinifera] 74 1e-11 emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera] 73 3e-11 emb|CAN69087.1| hypothetical protein VITISV_031061 [Vitis vinifera] 69 5e-10 emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera] 67 2e-09 gb|AAP43914.1| integrase [Gossypium raimondii] 62 4e-08 >emb|CAN80487.1| hypothetical protein VITISV_043198 [Vitis vinifera] Length = 1499 Score = 73.9 bits (180), Expect = 1e-11 Identities = 36/70 (51%), Positives = 54/70 (77%) Frame = +2 Query: 17 LRYLNTQKDVSARYIK*NSFLQKYTFHLQFQAGKDNRVVDALSRRSHLLVTLRSSLFGFD 196 LRYLN+QK +++R+ K +SFLQ +TF+L+ AG +N+VVDALSR++ LLV + ++ GF+ Sbjct: 881 LRYLNSQKKLNSRHAKWSSFLQLFTFNLKHCAGIENKVVDALSRKALLLVNMSTTTIGFE 940 Query: 197 ELRDLYAQDA 226 EL+ Y DA Sbjct: 941 ELKHCYDNDA 950 >emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera] Length = 1521 Score = 72.8 bits (177), Expect = 3e-11 Identities = 35/71 (49%), Positives = 54/71 (76%) Frame = +2 Query: 14 SLRYLNTQKDVSARYIK*NSFLQKYTFHLQFQAGKDNRVVDALSRRSHLLVTLRSSLFGF 193 +LRYLN+QK +++R+ K +SFLQ +TF+L+ AG +N+V DALSR++ LLV + ++ GF Sbjct: 988 ALRYLNSQKKLNSRHAKWSSFLQLFTFNLKHCAGIENKVADALSRKALLLVNMSTTTIGF 1047 Query: 194 DELRDLYAQDA 226 +EL+ Y DA Sbjct: 1048 EELKHCYDNDA 1058 >emb|CAN69087.1| hypothetical protein VITISV_031061 [Vitis vinifera] Length = 611 Score = 68.6 bits (166), Expect = 5e-10 Identities = 30/72 (41%), Positives = 54/72 (75%) Frame = +2 Query: 14 SLRYLNTQKDVSARYIK*NSFLQKYTFHLQFQAGKDNRVVDALSRRSHLLVTLRSSLFGF 193 +L++LN+Q+ ++ R+ K ++LQKYTF L+++AG NRV DAL RR +LL T+ +S+ G Sbjct: 367 ALKFLNSQQKLNHRHAKWVAYLQKYTFTLRYKAGSQNRVADALCRRVYLLQTMTNSVVGL 426 Query: 194 DELRDLYAQDAY 229 + +++ Y +D++ Sbjct: 427 EAIKEQYMKDSF 438 >emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera] Length = 1323 Score = 67.0 bits (162), Expect = 2e-09 Identities = 33/70 (47%), Positives = 50/70 (71%) Frame = +2 Query: 17 LRYLNTQKDVSARYIK*NSFLQKYTFHLQFQAGKDNRVVDALSRRSHLLVTLRSSLFGFD 196 LRYLN+QK +++R K +SFLQ +TF+L+ A +N+V DALS++ LLV + ++ GF+ Sbjct: 775 LRYLNSQKKLNSRXAKWSSFLQLFTFNLKHCAXIENKVXDALSKKXFLLVNMSTTTIGFE 834 Query: 197 ELRDLYAQDA 226 EL+ Y DA Sbjct: 835 ELKHCYDNDA 844 >gb|AAP43914.1| integrase [Gossypium raimondii] Length = 340 Score = 62.4 bits (150), Expect = 4e-08 Identities = 30/71 (42%), Positives = 48/71 (67%) Frame = +2 Query: 14 SLRYLNTQKDVSARYIK*NSFLQKYTFHLQFQAGKDNRVVDALSRRSHLLVTLRSSLFGF 193 SL++L Q ++ R+ + F++ + + ++++ GKDN V DALSRR LL TL + L GF Sbjct: 55 SLKHLKGQGKLNKRHARWVEFIESFPYGIRYKKGKDNIVADALSRRYTLLSTLHTKLLGF 114 Query: 194 DELRDLYAQDA 226 + L+DLYA D+ Sbjct: 115 EYLKDLYATDS 125