BLASTX nr result

ID: Coptis24_contig00016696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016696
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80487.1| hypothetical protein VITISV_043198 [Vitis vinifera]    74   1e-11
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]    73   3e-11
emb|CAN69087.1| hypothetical protein VITISV_031061 [Vitis vinifera]    69   5e-10
emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera]    67   2e-09
gb|AAP43914.1| integrase [Gossypium raimondii]                         62   4e-08

>emb|CAN80487.1| hypothetical protein VITISV_043198 [Vitis vinifera]
          Length = 1499

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/70 (51%), Positives = 54/70 (77%)
 Frame = +2

Query: 17   LRYLNTQKDVSARYIK*NSFLQKYTFHLQFQAGKDNRVVDALSRRSHLLVTLRSSLFGFD 196
            LRYLN+QK +++R+ K +SFLQ +TF+L+  AG +N+VVDALSR++ LLV + ++  GF+
Sbjct: 881  LRYLNSQKKLNSRHAKWSSFLQLFTFNLKHCAGIENKVVDALSRKALLLVNMSTTTIGFE 940

Query: 197  ELRDLYAQDA 226
            EL+  Y  DA
Sbjct: 941  ELKHCYDNDA 950


>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/71 (49%), Positives = 54/71 (76%)
 Frame = +2

Query: 14   SLRYLNTQKDVSARYIK*NSFLQKYTFHLQFQAGKDNRVVDALSRRSHLLVTLRSSLFGF 193
            +LRYLN+QK +++R+ K +SFLQ +TF+L+  AG +N+V DALSR++ LLV + ++  GF
Sbjct: 988  ALRYLNSQKKLNSRHAKWSSFLQLFTFNLKHCAGIENKVADALSRKALLLVNMSTTTIGF 1047

Query: 194  DELRDLYAQDA 226
            +EL+  Y  DA
Sbjct: 1048 EELKHCYDNDA 1058


>emb|CAN69087.1| hypothetical protein VITISV_031061 [Vitis vinifera]
          Length = 611

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/72 (41%), Positives = 54/72 (75%)
 Frame = +2

Query: 14  SLRYLNTQKDVSARYIK*NSFLQKYTFHLQFQAGKDNRVVDALSRRSHLLVTLRSSLFGF 193
           +L++LN+Q+ ++ R+ K  ++LQKYTF L+++AG  NRV DAL RR +LL T+ +S+ G 
Sbjct: 367 ALKFLNSQQKLNHRHAKWVAYLQKYTFTLRYKAGSQNRVADALCRRVYLLQTMTNSVVGL 426

Query: 194 DELRDLYAQDAY 229
           + +++ Y +D++
Sbjct: 427 EAIKEQYMKDSF 438


>emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera]
          Length = 1323

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/70 (47%), Positives = 50/70 (71%)
 Frame = +2

Query: 17  LRYLNTQKDVSARYIK*NSFLQKYTFHLQFQAGKDNRVVDALSRRSHLLVTLRSSLFGFD 196
           LRYLN+QK +++R  K +SFLQ +TF+L+  A  +N+V DALS++  LLV + ++  GF+
Sbjct: 775 LRYLNSQKKLNSRXAKWSSFLQLFTFNLKHCAXIENKVXDALSKKXFLLVNMSTTTIGFE 834

Query: 197 ELRDLYAQDA 226
           EL+  Y  DA
Sbjct: 835 ELKHCYDNDA 844


>gb|AAP43914.1| integrase [Gossypium raimondii]
          Length = 340

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/71 (42%), Positives = 48/71 (67%)
 Frame = +2

Query: 14  SLRYLNTQKDVSARYIK*NSFLQKYTFHLQFQAGKDNRVVDALSRRSHLLVTLRSSLFGF 193
           SL++L  Q  ++ R+ +   F++ + + ++++ GKDN V DALSRR  LL TL + L GF
Sbjct: 55  SLKHLKGQGKLNKRHARWVEFIESFPYGIRYKKGKDNIVADALSRRYTLLSTLHTKLLGF 114

Query: 194 DELRDLYAQDA 226
           + L+DLYA D+
Sbjct: 115 EYLKDLYATDS 125


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