BLASTX nr result

ID: Coptis24_contig00016681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016681
         (1323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285361.1| PREDICTED: uncharacterized protein LOC100262...   333   5e-89
emb|CAN69699.1| hypothetical protein VITISV_001515 [Vitis vinifera]   333   5e-89
ref|XP_002515453.1| conserved hypothetical protein [Ricinus comm...   275   2e-71
ref|XP_003603315.1| hypothetical protein MTR_3g106250 [Medicago ...   267   5e-69
ref|XP_002324318.1| predicted protein [Populus trichocarpa] gi|2...   265   2e-68

>ref|XP_002285361.1| PREDICTED: uncharacterized protein LOC100262872 [Vitis vinifera]
          Length = 371

 Score =  333 bits (855), Expect = 5e-89
 Identities = 177/338 (52%), Positives = 219/338 (64%), Gaps = 5/338 (1%)
 Frame = +2

Query: 200  SGNPNLATCLYNTDLGLAALTWCKNIFGRALHIDLHFEEQEDEEXXXXXXXXXXXXX--H 373
            SGNPNLATC+Y+TDLG+  LTW +N FGR+LH+ LH     +                 H
Sbjct: 39   SGNPNLATCVYHTDLGIFTLTWSRNFFGRSLHLQLHPSAAANLSPLSLSNPLSLSTPAFH 98

Query: 374  LHLKPFLFWRKHGVKRFDAKTS--SKSIEIYWDLTKAKFFSSSEPQSSFYVAVVVNSEMI 547
            LH+KPF+FW+K+G K+     +   + I ++WDLT+AKF S  EPQ  FYVAVV + EMI
Sbjct: 99   LHIKPFVFWKKYGSKKLHVAGAPGGRDIRVFWDLTRAKFGSWPEPQHGFYVAVVADGEMI 158

Query: 548  LLVGDLSEEAYERTKARKLEKIQSLVLRREHVFGNKLYTTKARVGGKVRDISIDCSVCDE 727
            LLVGD  +EAY +T+A+K E+ Q LVLRREHVFGNK+YTT+A  GGK R+ISIDCSV D+
Sbjct: 159  LLVGDSEKEAYNKTRAKKAERTQVLVLRREHVFGNKVYTTRASFGGKTREISIDCSVGDD 218

Query: 728  PKLSFSVDSKRVLVIKRLKWKFRGNEKIEVDGVPIQVSWDVFNWLFEDTDDGHAVXXXXX 907
            P+LSFSVD KRVL IKRLKWKFRGNEKIEVDG+PIQVSWDV+NWLF+D  + HAV     
Sbjct: 219  PRLSFSVDRKRVLQIKRLKWKFRGNEKIEVDGIPIQVSWDVYNWLFDDVMESHAVFMFKF 278

Query: 908  XXXXXXXXXXXXXLKLKQNGEMICWQQQQGYNGYLGMNGFERKKLKR-XXXXXXXXXXXX 1084
                          +L+Q  + +  +      G+ GMNG ERKK+K+             
Sbjct: 279  ERVGFEEEDE----ELQQQQQHLNEKNGMALCGF-GMNGIERKKMKKSLLKTTRSSSSSS 333

Query: 1085 XXXXXXXXXXXIMEWASKEENELQSQSGFSLLVYAWKS 1198
                       +MEWAS EE EL+S SGFSLLVYAWKS
Sbjct: 334  LSSASSGCSSSVMEWASTEEMELKSPSGFSLLVYAWKS 371


>emb|CAN69699.1| hypothetical protein VITISV_001515 [Vitis vinifera]
          Length = 372

 Score =  333 bits (855), Expect = 5e-89
 Identities = 178/345 (51%), Positives = 219/345 (63%), Gaps = 12/345 (3%)
 Frame = +2

Query: 200  SGNPNLATCLYNTDLGLAALTWCKNIFGRALHIDLHFEEQEDEEXXXXXXXXXXXXX--H 373
            SGNPNLATC+Y+TDLG+  LTW +N FGR+LH+ LH     +                 H
Sbjct: 39   SGNPNLATCVYHTDLGIFTLTWSRNFFGRSLHLQLHPSAAANLSPLSLSNPLSLSTPAFH 98

Query: 374  LHLKPFLFWRKHGVKRFDAKTS--SKSIEIYWDLTKAKFFSSSEPQSSFYVAVVVNSEMI 547
            LH+KPF+FW+K+G K+     +   + I ++WDLT+AKF S  EPQ  FYV VV + EMI
Sbjct: 99   LHIKPFVFWKKYGSKKLHVAGAPGGRDIRVFWDLTRAKFGSXPEPQHGFYVXVVADGEMI 158

Query: 548  LLVGDLSEEAYERTKARKLEKIQSLVLRREHVFGNKLYTTKARVGGKVRDISIDCSVCDE 727
            LLVGD  +EAY +T+A+K E+ Q LVLRREHVFGNK+YTT+A  GGK R+ISIDCSV D+
Sbjct: 159  LLVGDSEKEAYNKTRAKKAERTQVLVLRREHVFGNKVYTTRASFGGKTREISIDCSVGDD 218

Query: 728  PKLSFSVDSKRVLVIKRLKWKFRGNEKIEVDGVPIQVSWDVFNWLFEDTDDGHAVXXXXX 907
            P+LSFSVD KRVL IKRLKWKFRGNEKIEVDG+PIQVSWDV+NWLF+D  + HAV     
Sbjct: 219  PRLSFSVDRKRVLQIKRLKWKFRGNEKIEVDGIPIQVSWDVYNWLFDDVMESHAV----- 273

Query: 908  XXXXXXXXXXXXXLKLKQNGEMICWQQQQGYNGY-------LGMNGFERKKLKR-XXXXX 1063
                         +  ++  E +  QQQQ  N          GMNG ERKK+K+      
Sbjct: 274  ------FMFKFERVGFEEEDEELQQQQQQHLNEKNGMALCGFGMNGIERKKMKKSLLKTT 327

Query: 1064 XXXXXXXXXXXXXXXXXXIMEWASKEENELQSQSGFSLLVYAWKS 1198
                              +MEWAS EE +L+S SGFSLLVYAWKS
Sbjct: 328  RSSSSSSLSSASSGCSSSVMEWASTEEMDLKSPSGFSLLVYAWKS 372


>ref|XP_002515453.1| conserved hypothetical protein [Ricinus communis]
            gi|223545397|gb|EEF46902.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 336

 Score =  275 bits (703), Expect = 2e-71
 Identities = 148/294 (50%), Positives = 193/294 (65%), Gaps = 19/294 (6%)
 Frame = +2

Query: 371  HLHLKPFLFWRKHGVKRFD---------AKTSSKSIEIYWDLTKAKFFSSSEPQSSFYVA 523
            HL +KP++FW+KHG K+           +  S+ +I+I+WDL++AKF S  EPQS FY+A
Sbjct: 45   HLDIKPYIFWKKHGSKKLQIINHQDYHTSTASTPAIQIFWDLSRAKFGSGPEPQSGFYIA 104

Query: 524  VVVNSEMILLVGDLSEEAYERTKARKLEKIQSLVLRREHVFGNKLYTTKARVGGKVRDIS 703
            VVV  E++LLVGD +++A+ +T+ARK E+ Q LVLRREHV+GN+++TTKAR GGK RDIS
Sbjct: 105  VVVEREIVLLVGDSTKQAFAKTRARKQERNQVLVLRREHVYGNRVFTTKARFGGKNRDIS 164

Query: 704  IDCSVCDEPKLSFSVDSKRVLVIKRLKWKFRGNEKIEVDGVPIQVSWDVFNWLFEDTDDG 883
            IDC+V  + +LSFSVD+KRVL IK+LKWKFRGNEKIEVDGVPIQVSWDV+NWLFED ++G
Sbjct: 165  IDCTVNGDARLSFSVDNKRVLHIKQLKWKFRGNEKIEVDGVPIQVSWDVYNWLFEDINNG 224

Query: 884  HAV------XXXXXXXXXXXXXXXXXXLKLKQNGEMICWQQQQGYNGYLGMNGFE----R 1033
            HAV                        ++ ++NG ++ WQQ    N   GM+G E    R
Sbjct: 225  HAVFMFRFESTDIEDDQEQEQEEECAGVQDEKNG-VVPWQQVSFNN--FGMSGIEWRRMR 281

Query: 1034 KKLKRXXXXXXXXXXXXXXXXXXXXXXXIMEWASKEENELQSQSGFSLLVYAWK 1195
            + L R                       IMEWAS EENEL + +GFSLLVYAW+
Sbjct: 282  RSLMRTGRSSSSSSISMSSASSGGGSSSIMEWASTEENELSAPNGFSLLVYAWR 335


>ref|XP_003603315.1| hypothetical protein MTR_3g106250 [Medicago truncatula]
            gi|355492363|gb|AES73566.1| hypothetical protein
            MTR_3g106250 [Medicago truncatula]
          Length = 346

 Score =  267 bits (682), Expect = 5e-69
 Identities = 143/334 (42%), Positives = 199/334 (59%), Gaps = 2/334 (0%)
 Frame = +2

Query: 200  SGNPNLATCLYNTDLGLAALTWCKNIFGRALHIDLHFEEQEDEEXXXXXXXXXXXXXHLH 379
            S NPNL T LY +++GL +LTW ++I GR+LH+ LH    +                HLH
Sbjct: 32   STNPNLTTYLYQSNVGLVSLTWSRSILGRSLHVQLHHHPFDSPPTNPSSSSSSF---HLH 88

Query: 380  LKPFLFWRKHGVKRFDAKTSSKSIEIYWDLTKAKFFSSSEPQSSFYVAVVVNSEMILLVG 559
            +KPF+FW+KHG K+  + T      ++W+L+KAKF S  EP S FY AVVV++EM LLVG
Sbjct: 89   IKPFIFWKKHGTKKLSSNT-----HLFWNLSKAKFGSGPEPDSGFYFAVVVDNEMTLLVG 143

Query: 560  DLSEEAYERTKARKLEK-IQSLVLRREHVFGNKLYTTKARVGGKVRDISIDCSVCDEPKL 736
            D +++AY ++K+++ +   Q LV++REHV+ NK+Y T+AR GGK+R+I IDC   D  +L
Sbjct: 144  DSNKDAYAKSKSKEHKNNFQYLVMKREHVYANKIYNTRARFGGKMREIQIDCGGRDHSRL 203

Query: 737  SFSVDSKRVLVIKRLKWKFRGNEKIEVDGVPIQVSWDVFNWLF-EDTDDGHAVXXXXXXX 913
             FSVD ++VL IKRLKWKFRGNE++E+DGVP+Q+SWDV+NWLF +D  DGHA+       
Sbjct: 204  CFSVDGQKVLQIKRLKWKFRGNERVEIDGVPVQISWDVYNWLFVKDNSDGHAIFMFKFEE 263

Query: 914  XXXXXXXXXXXLKLKQNGEMICWQQQQGYNGYLGMNGFERKKLKRXXXXXXXXXXXXXXX 1093
                        K K    ++  Q        L +  +E  K+ +               
Sbjct: 264  EDEDEQQRG---KEKSLTNLLAQQN-------LNLGVYELGKMGK--SWSSSSVSMASSG 311

Query: 1094 XXXXXXXXIMEWASKEENELQSQSGFSLLVYAWK 1195
                    ++EW+S EENEL    GFSLLVYAWK
Sbjct: 312  GSFGASSSVLEWSSVEENELVVPVGFSLLVYAWK 345


>ref|XP_002324318.1| predicted protein [Populus trichocarpa] gi|222865752|gb|EEF02883.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score =  265 bits (677), Expect = 2e-68
 Identities = 131/236 (55%), Positives = 171/236 (72%), Gaps = 9/236 (3%)
 Frame = +2

Query: 212 NLATCLYNTDLGLAALTWCKNIFGRALHIDLHFEEQE----DEEXXXXXXXXXXXXXHLH 379
           NL TCLY TDLGL +LTW  ++ G +LH+ LH  +                      HL+
Sbjct: 1   NLTTCLYQTDLGLFSLTWSSSLLGHSLHLRLHPIDDNASYCSPVSLSNPLSLSTISFHLN 60

Query: 380 LKPFLFWRKHGVKRF-----DAKTSSKSIEIYWDLTKAKFFSSSEPQSSFYVAVVVNSEM 544
           +KPFLFW++HG K+      +  T +  I+I+WDL++A+F S  EPQS FY+AVVV  E+
Sbjct: 61  IKPFLFWKRHGSKKLHVINQEPDTPTPRIQIFWDLSRARFGSGPEPQSRFYIAVVVEREV 120

Query: 545 ILLVGDLSEEAYERTKARKLEKIQSLVLRREHVFGNKLYTTKARVGGKVRDISIDCSVCD 724
           +L+VGDL++EA+ +TKA K E+ Q LVLRREHVFGN++YTT+AR GG+ R ISIDCSV +
Sbjct: 121 VLVVGDLTKEAFAKTKALKQERPQVLVLRREHVFGNRVYTTRARFGGRNRVISIDCSVNN 180

Query: 725 EPKLSFSVDSKRVLVIKRLKWKFRGNEKIEVDGVPIQVSWDVFNWLFEDTDDGHAV 892
           + +L FSVD+KRVL IKRLKWKFRGNE+IEVDGVPIQVSWDV+NWLF+  ++ HAV
Sbjct: 181 DARLCFSVDNKRVLQIKRLKWKFRGNERIEVDGVPIQVSWDVYNWLFDGINNDHAV 236


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