BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016677
         (1157 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   102   2e-19
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    99   3e-18
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...    99   3e-18
gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japo...    98   4e-18
ref|XP_002438972.1| hypothetical protein SORBIDRAFT_10g029210 [S...    97   6e-18

>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  102 bits (254), Expect = 2e-19
 Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 2/169 (1%)
 Frame = -3

Query: 729  FAYLVDRVHNNVRGWKPSVLLQAG*TVMVESVAQALPIYAMSAYA*PISLCNEILLDVY* 550
            F  L+DR+   +RGWK  +L +AG  V++++V QALP Y M  Y  P+++  EI   +  
Sbjct: 772  FRELLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYLMGVYKLPVAVIQEIHSAMAR 831

Query: 549  FRDF*GQGVDRNPIHTQSWDKLCRPKCTGGLGFRTSCDMNRALLAKH*WKLNLEQNSLWV 370
            F  + G+G D   +H  SW+K+C+PKC GG+GF+     N ALL K  W+L   + SL  
Sbjct: 832  FW-WGGKG-DERKMHWLSWEKMCKPKCMGGMGFKDLAVFNDALLGKQVWRLLHNKESLLS 889

Query: 369  QTFEAA*GKWWPNGHWNSSLPSYI-PYYWRSLCKSR-LVTQFSFWRIHD 229
            +   A   K++P+G    +   Y   Y WRS+  ++ LV +   WR+ D
Sbjct: 890  RVMSA---KYYPHGDVRYARLGYSHSYSWRSIWGAKSLVLEGLIWRVGD 935


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 62/175 (35%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
 Frame = -3

Query: 729  FAYLVDRVHNNVRGWKPSVLLQAG*TVMVESVAQALPIYAMSAYA*PISLCNEILLDVY* 550
            F+++ DR+ + + GW    L + G  VM++SVA  LP Y MS +  P ++ +++   V  
Sbjct: 549  FSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMSCFRLPKAITSKLTSAVAK 608

Query: 549  FRDF*GQGVDRNPIHTQSWDKLCRPKCTGGLGFRTSCDMNRALLAKH*WKLNLEQNSLWV 370
            F  +     D   +H  +WDKLC  K  GGLGFR   D N ALLAK  W+L    +SL+ 
Sbjct: 609  F--WWSSNGDSRGMHWMAWDKLCSSKSDGGLGFRNVDDFNSALLAKQLWRLITAPDSLFA 666

Query: 369  QTFEAA*GKWWPNGHWNSSLPSYIPYY-WRSLCKSR-LVTQFSFWRIHDMATFSV 211
            + F+   G+++   +   S+ SY P Y WRS+  +R LV +    R+   A+ SV
Sbjct: 667  KVFK---GRYFRKSNPLDSIKSYSPSYGWRSMISARSLVYKGLIKRVGSGASISV 718


>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 65/179 (36%), Positives = 97/179 (54%), Gaps = 2/179 (1%)
 Frame = -3

Query: 723 YLVDRVHNNVRGWKPSVLLQAG*TVMVESVAQALPIYAMSAYA*PISLCNEILLDVY*FR 544
           ++ +RV + + GWK   L  AG  V+++SVAQA+P Y MS +  P  +C EI   V  F 
Sbjct: 16  FVKERVWSRLNGWKEKSLSVAGREVLIKSVAQAIPTYIMSCFRLPDGVCXEIESMVCNF- 74

Query: 543 DF*GQGVDRNPIHTQSWDKLCRPKCTGGLGFRTSCDMNRALLAKH*WKLNLEQNSLWVQT 364
            + GQ  +   IH  SW +LC+ K  GG+GFR     N ALLAK  W+L     SL  + 
Sbjct: 75  -WWGQKEETRKIHWTSWKQLCKSKLRGGMGFRCLQHFNSALLAKQCWRLXQRPQSLVARV 133

Query: 363 FEAA*GKWWPNGHWNSSLPSYIP-YYWRSLCKS-RLVTQFSFWRIHDMATFSVCCTRYV 193
           F+A   +++P   +  +L    P + WRS+  S RL+     WR+ + A+ SV   ++V
Sbjct: 134 FKA---RYFPQTSFLDALVGSNPSFTWRSIVGSRRLLNAGLRWRVGNGASISVKYDKWV 189


>gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japonica Group]
          Length = 615

 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 61/169 (36%), Positives = 93/169 (55%), Gaps = 2/169 (1%)
 Frame = -3

Query: 729 FAYLVDRVHNNVRGWKPSVLLQAG*TVMVESVAQALPIYAMSAYA*PISLCNEILLDVY* 550
           F+YL DRV   ++GWK  +L +AG  ++++SV Q++P YAMS +    +LCNE  L    
Sbjct: 221 FSYLKDRVWKRLQGWKERLLSKAGKEILIKSVVQSIPTYAMSCFDLTKTLCNE--LGSLV 278

Query: 549 FRDF*GQGVDRNPIHTQSWDKLCRPKCTGGLGFRTSCDMNRALLAKH*WKLNLEQNSLWV 370
            R +  Q  + N +H  SW+ LCR K  GG+G+R     N A+LA+  W+L +E  SL  
Sbjct: 279 CRFWWAQQENENKVHWVSWELLCRRKEQGGIGYRDLHLFNLAMLARQGWRLIMEPMSLCA 338

Query: 369 QTFEAA*GKWWPNGHWNSSLPS-YIPYYWRSLCKS-RLVTQFSFWRIHD 229
           Q   A   K++P G   +      I Y WRS+ +  + + +   WR+ D
Sbjct: 339 QVLRA---KYFPTGDLMAVREKPGISYSWRSIVRGIQALKKGLIWRVGD 384


>ref|XP_002438972.1| hypothetical protein SORBIDRAFT_10g029210 [Sorghum bicolor]
           gi|241917195|gb|EER90339.1| hypothetical protein
           SORBIDRAFT_10g029210 [Sorghum bicolor]
          Length = 240

 Score = 97.4 bits (241), Expect = 6e-18
 Identities = 59/154 (38%), Positives = 90/154 (58%), Gaps = 1/154 (0%)
 Frame = -3

Query: 729 FAYLVDRVHNNVRGWKPSVLLQAG*TVMVESVAQALPIYAMSAYA*PISLCNEILLDVY* 550
           FAYL DRV   ++GWK  +L +AG  +++++VAQA+P YAMS +    +LC+EI   +  
Sbjct: 9   FAYLKDRVWKRIQGWKEKLLSKAGKEILIKAVAQAIPTYAMSCFDLTKTLCDEISTMICC 68

Query: 549 FRDF*GQGVDRNPIHTQSWDKLCRPKCTGGLGFRTSCDMNRALLAKH*WKLNLEQNSLWV 370
           +     Q  ++N +H  SWD +CR K  GGLGFR     N A+LA+  W+L +  +SL  
Sbjct: 69  Y--LWSQQDNKNKMHWISWDTMCRRKEEGGLGFRDLHLFNLAMLARQAWRLLMTPDSLCG 126

Query: 369 QTFEAA*GKWWPN-GHWNSSLPSYIPYYWRSLCK 271
           Q  +A   K++ N G  ++     I Y WRS+ +
Sbjct: 127 QVLKA---KYYRNCGLLDAKEAPGISYTWRSILR 157