BLASTX nr result

ID: Coptis24_contig00016676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016676
         (773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313607.1| predicted protein [Populus trichocarpa] gi|2...    65   1e-08
gb|ABR18003.1| unknown [Picea sitchensis]                              65   1e-08
ref|XP_002530530.1| conserved hypothetical protein [Ricinus comm...    64   3e-08
ref|XP_002281777.1| PREDICTED: mRNA-decapping enzyme-like protei...    64   5e-08
ref|XP_002309413.1| predicted protein [Populus trichocarpa] gi|2...    62   1e-07

>ref|XP_002313607.1| predicted protein [Populus trichocarpa] gi|222850015|gb|EEE87562.1|
           predicted protein [Populus trichocarpa]
          Length = 369

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 47/136 (34%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
 Frame = +1

Query: 1   TTVPALEIPYAPSPRSGPSLPFPNFSET-----HVTNLVKPSVFLMQPPLSTYMIXXXXX 165
           +T+P L+IP  P   S P +P  + S+         NLVKPS F+  PP ST M+     
Sbjct: 231 STMPTLQIPSTPLSASIPLMPLLDVSDVSSSNNRTANLVKPSFFV--PPSSTRMMPPVSS 288

Query: 166 XXXXXXXXXXXXXXXXXYGAPLLQAFXXXXXXXXXXXXXXIN---GLGITRDKVRDTLMR 336
                            YGAPLLQ F               +   G  I++DKVRD L+ 
Sbjct: 289 SMPTAPPLNPPTSLHRPYGAPLLQPFPPPTPPPSLTPASVPSPNHGPVISKDKVRDALLA 348

Query: 337 LVQNNRFVDMFYEELL 384
           LVQ+++F+DM Y  LL
Sbjct: 349 LVQDDQFIDMVYRTLL 364


>gb|ABR18003.1| unknown [Picea sitchensis]
          Length = 368

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 50/137 (36%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
 Frame = +1

Query: 1   TTVPALEIPYAPSPRSGPSL--------PFPNFSETHVTNLVKPSVFLMQPPLSTYMIXX 156
           TT+  + +   P P S  SL             S +    LVKPS F+ QP LST M   
Sbjct: 228 TTLTPMSVSSPPLPASSVSLVHMAARPLDVTEVSSSSHATLVKPSFFVPQPSLSTSM-PL 286

Query: 157 XXXXXXXXXXXXXXXXXXXXYGAPLLQAFXXXXXXXXXXXXXXIN-GLGITRDKVRDTLM 333
                               YGAPLLQ F              ++ G  ITRDKVRDTL 
Sbjct: 287 SLSNAPMAPPLNPLPPLQPSYGAPLLQPFPPPAPSQSLAPASTVSQGPIITRDKVRDTLA 346

Query: 334 RLVQNNRFVDMFYEELL 384
           RLVQN  F+DM Y E+L
Sbjct: 347 RLVQNEHFIDMVYREML 363


>ref|XP_002530530.1| conserved hypothetical protein [Ricinus communis]
           gi|223529934|gb|EEF31862.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 366

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 41/127 (32%), Positives = 54/127 (42%)
 Frame = +1

Query: 7   VPALEIPYAPSPRSGPSLPFPNFSETHVTNLVKPSVFLMQPPLSTYMIXXXXXXXXXXXX 186
           +P L +   P+  +    P P  S   VTNLVKPS F   P  S  +             
Sbjct: 236 IPTLSLSPLPASVTIRETPDPISSSNRVTNLVKPSSFFTPPSSSAPVAPPISSAVPTAPS 295

Query: 187 XXXXXXXXXXYGAPLLQAFXXXXXXXXXXXXXXINGLGITRDKVRDTLMRLVQNNRFVDM 366
                     YG P+LQ F                   I RDKVRD L+ LVQ+++F+D+
Sbjct: 296 LHPPLNLQRPYGTPMLQPFPPPTPPPSLTPSSATTMPVINRDKVRDALLTLVQDDQFIDL 355

Query: 367 FYEELLK 387
           FY+ LLK
Sbjct: 356 FYQALLK 362


>ref|XP_002281777.1| PREDICTED: mRNA-decapping enzyme-like protein [Vitis vinifera]
           gi|297740156|emb|CBI30338.3| unnamed protein product
           [Vitis vinifera]
          Length = 370

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 47/136 (34%), Positives = 60/136 (44%), Gaps = 9/136 (6%)
 Frame = +1

Query: 7   VPALEIPYAP-SPRSGPSLPF-----PNFSETHVTNLVKPSVFLMQPPLSTYMIXXXXXX 168
           VP L++P  P S  S P LP      P  S    TNLVKPS F   P  S+ +I      
Sbjct: 231 VPTLQVPSLPRSASSTPPLPIHETPDPISSSNLATNLVKPSSFFAPPSSSSALIMPPMPS 290

Query: 169 XXXXXXXXXXXXXXXXYGAPLLQAFXXXXXXXXXXXXXXIN---GLGITRDKVRDTLMRL 339
                           YGAP+LQ F               +   G  I RDKVRD L+ L
Sbjct: 291 SMPTAGLHPPLNLQRPYGAPMLQPFPPPAPPASLTPTSSPSPNYGPVINRDKVRDALLLL 350

Query: 340 VQNNRFVDMFYEELLK 387
            Q+N+F+D+ ++ LLK
Sbjct: 351 AQDNQFIDLVHQALLK 366


>ref|XP_002309413.1| predicted protein [Populus trichocarpa] gi|222855389|gb|EEE92936.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
 Frame = +1

Query: 7   VPALEIPYAPSPRSGPSLPFPNFSETHVTNLVKPSVF--------LMQPPLSTYMIXXXX 162
           +P+L +    + ++    P P  S +HVTNLVKPS F        L+ PP+S+ +     
Sbjct: 152 IPSLPLSSLSTSKTIHGTPDPISSGSHVTNLVKPSFFAPLSSSSVLLPPPISSPLTSAPA 211

Query: 163 XXXXXXXXXXXXXXXXXXYGAPLLQAFXXXXXXXXXXXXXXINGLGITRDKVRDTLMRLV 342
                             YG P+LQ F                   I+RDKVRD L+ L+
Sbjct: 212 LQPPLNLQRP--------YGTPMLQPFPPPTPPPSLTPSSTATTPLISRDKVRDALLMLI 263

Query: 343 QNNRFVDMFYEELLK 387
           Q+++F+DMF++ LLK
Sbjct: 264 QDDQFIDMFHQALLK 278


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