BLASTX nr result

ID: Coptis24_contig00016660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016660
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509606.1| leucine rich repeat receptor kinase, putativ...   260   2e-67
ref|XP_002266682.2| PREDICTED: probable LRR receptor-like serine...   255   9e-66
emb|CBI22150.3| unnamed protein product [Vitis vinifera]              255   9e-66
ref|XP_002267632.1| PREDICTED: leucine-rich repeat receptor-like...   254   1e-65
emb|CAN72186.1| hypothetical protein VITISV_012898 [Vitis vinifera]   249   4e-64

>ref|XP_002509606.1| leucine rich repeat receptor kinase, putative [Ricinus communis]
           gi|223549505|gb|EEF50993.1| leucine rich repeat receptor
           kinase, putative [Ricinus communis]
          Length = 693

 Score =  260 bits (665), Expect = 2e-67
 Identities = 130/184 (70%), Positives = 146/184 (79%)
 Frame = -1

Query: 552 QHVSGTAELRALMEMKEALDPENRFLSSWTSDGDPCRGSFEGVACNEHGKVANISLQGKG 373
           QHV G  ELRAL+E+K ALDP N+FL SW +DGDPC GSFEGVACNEH KVANISLQG+G
Sbjct: 36  QHVCGNTELRALIELKSALDPTNKFLQSWAADGDPCSGSFEGVACNEHRKVANISLQGRG 95

Query: 372 LYGKVPSAVAGLKCLSGLYLHYNSLTGEIPKEISNLTELSDLYLNVNYLSGSIPQEIGNM 193
           L G +  AVA LKCLSGLYLHYNSL+GEIPKE++NLTELSD+YLNVN LSGSIP EIG M
Sbjct: 96  LSGSISPAVAKLKCLSGLYLHYNSLSGEIPKELANLTELSDVYLNVNNLSGSIPPEIGGM 155

Query: 192 ASLQVLQLCYNQLTGSIPRQLGSLKKLTVLALQCNHLTGAIPAXXXXXXXXXXXXXSYNN 13
           ASLQVL+LC NQLTGSIPR++ SLK+LTV+ALQ N LT  IPA              +NN
Sbjct: 156 ASLQVLELCCNQLTGSIPREMDSLKRLTVVALQYNRLTDQIPAGLGNLGMLRRLDLGFNN 215

Query: 12  LFGP 1
           L GP
Sbjct: 216 LSGP 219



 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 35/84 (41%), Positives = 45/84 (53%)
 Frame = -1

Query: 372 LYGKVPSAVAGLKCLSGLYLHYNSLTGEIPKEISNLTELSDLYLNVNYLSGSIPQEIGNM 193
           L G +P  +  LK L+ + L YN LT +IP  + NL  L  L L  N LSG IP  + N 
Sbjct: 168 LTGSIPREMDSLKRLTVVALQYNRLTDQIPAGLGNLGMLRRLDLGFNNLSGPIPITLANA 227

Query: 192 ASLQVLQLCYNQLTGSIPRQLGSL 121
             LQVL +  N L+G +P  L  L
Sbjct: 228 PQLQVLDVRNNSLSGMVPSALQKL 251


>ref|XP_002266682.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g36180 [Vitis vinifera]
          Length = 813

 Score =  255 bits (651), Expect = 9e-66
 Identities = 131/181 (72%), Positives = 147/181 (81%)
 Frame = -1

Query: 546 VSGTAELRALMEMKEALDPENRFLSSWTSDGDPCRGSFEGVACNEHGKVANISLQGKGLY 367
           V G +ELRALMEMK +LDP NRFLSSWTSD DPC GSFEGV CNEH KVANI+LQGKGL 
Sbjct: 25  VWGNSELRALMEMKASLDPVNRFLSSWTSDADPCSGSFEGVHCNEHRKVANITLQGKGLS 84

Query: 366 GKVPSAVAGLKCLSGLYLHYNSLTGEIPKEISNLTELSDLYLNVNYLSGSIPQEIGNMAS 187
           GKVP AVAGLKCLSGLYLHYNSL+GEIP+EIS+LTELSDLYL+ N LSG+IP EIGNMAS
Sbjct: 85  GKVPPAVAGLKCLSGLYLHYNSLSGEIPREISSLTELSDLYLDFNNLSGAIPPEIGNMAS 144

Query: 186 LQVLQLCYNQLTGSIPRQLGSLKKLTVLALQCNHLTGAIPAXXXXXXXXXXXXXSYNNLF 7
           LQVLQLC NQLTG+IP ++G LKKL+V++LQ N+LTG IP              S+N L 
Sbjct: 145 LQVLQLCSNQLTGAIPSEIGFLKKLSVVSLQKNNLTGKIPPSLGNLGMLRMLNLSFNRLS 204

Query: 6   G 4
           G
Sbjct: 205 G 205



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
 Frame = -1

Query: 438 SFEGVACNEHGKVANIS---LQGKGLYGKVPSAVAGLKCLSGLYLHYNSLTGEIPKEISN 268
           +  G    E G +A++    L    L G +PS +  LK LS + L  N+LTG+IP  + N
Sbjct: 130 NLSGAIPPEIGNMASLQVLQLCSNQLTGAIPSEIGFLKKLSVVSLQKNNLTGKIPPSLGN 189

Query: 267 LTELSDLYLNVNYLSGSIPQEIGNMASLQVLQLCYNQLTGSIPRQLGSLKK 115
           L  L  L L+ N LSG+IP  +    +L+ L +  N L G +P  L  LK+
Sbjct: 190 LGMLRMLNLSFNRLSGTIPANLAQAPALEFLDVRNNSLWGIVPSGLKKLKE 240


>emb|CBI22150.3| unnamed protein product [Vitis vinifera]
          Length = 680

 Score =  255 bits (651), Expect = 9e-66
 Identities = 131/181 (72%), Positives = 147/181 (81%)
 Frame = -1

Query: 546 VSGTAELRALMEMKEALDPENRFLSSWTSDGDPCRGSFEGVACNEHGKVANISLQGKGLY 367
           V G +ELRALMEMK +LDP NRFLSSWTSD DPC GSFEGV CNEH KVANI+LQGKGL 
Sbjct: 25  VWGNSELRALMEMKASLDPVNRFLSSWTSDADPCSGSFEGVHCNEHRKVANITLQGKGLS 84

Query: 366 GKVPSAVAGLKCLSGLYLHYNSLTGEIPKEISNLTELSDLYLNVNYLSGSIPQEIGNMAS 187
           GKVP AVAGLKCLSGLYLHYNSL+GEIP+EIS+LTELSDLYL+ N LSG+IP EIGNMAS
Sbjct: 85  GKVPPAVAGLKCLSGLYLHYNSLSGEIPREISSLTELSDLYLDFNNLSGAIPPEIGNMAS 144

Query: 186 LQVLQLCYNQLTGSIPRQLGSLKKLTVLALQCNHLTGAIPAXXXXXXXXXXXXXSYNNLF 7
           LQVLQLC NQLTG+IP ++G LKKL+V++LQ N+LTG IP              S+N L 
Sbjct: 145 LQVLQLCSNQLTGAIPSEIGFLKKLSVVSLQKNNLTGKIPPSLGNLGMLRMLNLSFNRLS 204

Query: 6   G 4
           G
Sbjct: 205 G 205



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
 Frame = -1

Query: 438 SFEGVACNEHGKVANIS---LQGKGLYGKVPSAVAGLKCLSGLYLHYNSLTGEIPKEISN 268
           +  G    E G +A++    L    L G +PS +  LK LS + L  N+LTG+IP  + N
Sbjct: 130 NLSGAIPPEIGNMASLQVLQLCSNQLTGAIPSEIGFLKKLSVVSLQKNNLTGKIPPSLGN 189

Query: 267 LTELSDLYLNVNYLSGSIPQEIGNMASLQVLQLCYNQLTGSIPRQLGSLKK 115
           L  L  L L+ N LSG+IP  +    +L+ L +  N L G +P  L  LK+
Sbjct: 190 LGMLRMLNLSFNRLSGTIPANLAQAPALEFLDVRNNSLWGIVPSGLKKLKE 240


>ref|XP_002267632.1| PREDICTED: leucine-rich repeat receptor-like
           serine/threonine-protein kinase At1g17230 [Vitis
           vinifera]
          Length = 681

 Score =  254 bits (650), Expect = 1e-65
 Identities = 131/181 (72%), Positives = 146/181 (80%)
 Frame = -1

Query: 546 VSGTAELRALMEMKEALDPENRFLSSWTSDGDPCRGSFEGVACNEHGKVANISLQGKGLY 367
           V GT+ELR+LM +K  LDP N FLSSWT +GDPC GSFEGVACNE G+VANISLQGKGL 
Sbjct: 22  VHGTSELRSLMVIKSTLDPHNLFLSSWTINGDPCDGSFEGVACNERGQVANISLQGKGLT 81

Query: 366 GKVPSAVAGLKCLSGLYLHYNSLTGEIPKEISNLTELSDLYLNVNYLSGSIPQEIGNMAS 187
           GK+  A+AGLK L+GLYLHYNSL GEIP EI+NLT+LSDLYLNVN LSG+IP E+G MA+
Sbjct: 82  GKLSPAIAGLKHLTGLYLHYNSLYGEIPVEIANLTQLSDLYLNVNNLSGTIPAELGKMAT 141

Query: 186 LQVLQLCYNQLTGSIPRQLGSLKKLTVLALQCNHLTGAIPAXXXXXXXXXXXXXSYNNLF 7
           LQVLQLCYNQLTGSIP QLGSLKKL+VLALQ N LTGAIPA             S+N LF
Sbjct: 142 LQVLQLCYNQLTGSIPTQLGSLKKLSVLALQSNQLTGAIPASLGDLGMLVRLDLSFNRLF 201

Query: 6   G 4
           G
Sbjct: 202 G 202



 Score = 62.8 bits (151), Expect = 8e-08
 Identities = 42/109 (38%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
 Frame = -1

Query: 438 SFEGVACNEHGKVANIS---LQGKGLYGKVPSAVAGLKCLSGLYLHYNSLTGEIPKEISN 268
           +  G    E GK+A +    L    L G +P+ +  LK LS L L  N LTG IP  + +
Sbjct: 127 NLSGTIPAELGKMATLQVLQLCYNQLTGSIPTQLGSLKKLSVLALQSNQLTGAIPASLGD 186

Query: 267 LTELSDLYLNVNYLSGSIPQEIGNMASLQVLQLCYNQLTGSIPRQLGSL 121
           L  L  L L+ N L GSIP+ + ++ SL+VL +  N L+G IP  L  L
Sbjct: 187 LGMLVRLDLSFNRLFGSIPRRLADVVSLEVLDIRNNTLSGKIPPALKRL 235


>emb|CAN72186.1| hypothetical protein VITISV_012898 [Vitis vinifera]
          Length = 702

 Score =  249 bits (637), Expect = 4e-64
 Identities = 129/184 (70%), Positives = 142/184 (77%)
 Frame = -1

Query: 552 QHVSGTAELRALMEMKEALDPENRFLSSWTSDGDPCRGSFEGVACNEHGKVANISLQGKG 373
           Q +S   ELR LM MK +LDPENRFLSSWTSD DPC  SFEGVACNE+G V NISLQGKG
Sbjct: 20  QALSSNPELRVLMAMKASLDPENRFLSSWTSDNDPCSDSFEGVACNEYGHVVNISLQGKG 79

Query: 372 LYGKVPSAVAGLKCLSGLYLHYNSLTGEIPKEISNLTELSDLYLNVNYLSGSIPQEIGNM 193
           L G++P  +A LK LSGL+LH+NSL GEIPKEIS L ELSDLYLNVN LSG I   IGNM
Sbjct: 80  LMGQIPKEIAELKSLSGLFLHFNSLXGEIPKEISALAELSDLYLNVNNLSGVIHPGIGNM 139

Query: 192 ASLQVLQLCYNQLTGSIPRQLGSLKKLTVLALQCNHLTGAIPAXXXXXXXXXXXXXSYNN 13
           ++LQVLQLCYN+LTG IP QLGSLKKL+VLALQ N LTGAIPA             S+NN
Sbjct: 140 SNLQVLQLCYNKLTGGIPTQLGSLKKLSVLALQSNELTGAIPASLGDLEMLTRLDLSFNN 199

Query: 12  LFGP 1
           LFGP
Sbjct: 200 LFGP 203


Top