BLASTX nr result

ID: Coptis24_contig00016643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016643
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001067634.1| Os11g0256200 [Oryza sativa Japonica Group] g...   112   3e-23
gb|EEC67966.1| hypothetical protein OsI_35718 [Oryza sativa Indi...   112   3e-23
ref|XP_002449223.1| hypothetical protein SORBIDRAFT_05g006580 [S...   111   7e-23
ref|XP_002269805.1| PREDICTED: protein FAM136A [Vitis vinifera] ...   111   7e-23
ref|XP_003577636.1| PREDICTED: pentatricopeptide repeat-containi...   109   2e-22

>ref|NP_001067634.1| Os11g0256200 [Oryza sativa Japonica Group]
           gi|62734754|gb|AAX96863.1| expressed protein [Oryza
           sativa Japonica Group] gi|77549626|gb|ABA92423.1|
           expressed protein [Oryza sativa Japonica Group]
           gi|113644856|dbj|BAF27997.1| Os11g0256200 [Oryza sativa
           Japonica Group] gi|215765972|dbj|BAG98200.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222635564|gb|EEE65696.1| hypothetical protein
           OsJ_21320 [Oryza sativa Japonica Group]
          Length = 148

 Score =  112 bits (280), Expect = 3e-23
 Identities = 51/76 (67%), Positives = 69/76 (90%)
 Frame = +3

Query: 6   PVMQANNVVEAEMAKFQERMNRSMMVCQDKFEAAKLQQQKTGAMTELESCVDQAIQESVQ 185
           PV+ ANNVVE EMAKFQER+NRS+MVCQDKFEAAKLQ+ KT A  ELE+CV+++I +S++
Sbjct: 73  PVLTANNVVETEMAKFQERLNRSLMVCQDKFEAAKLQKMKTHATEELEACVNRSIDDSIR 132

Query: 186 LLPHIVDKLKASLSIN 233
           +LPH+VD++K++LS+N
Sbjct: 133 VLPHLVDQIKSTLSMN 148


>gb|EEC67966.1| hypothetical protein OsI_35718 [Oryza sativa Indica Group]
          Length = 142

 Score =  112 bits (280), Expect = 3e-23
 Identities = 51/76 (67%), Positives = 69/76 (90%)
 Frame = +3

Query: 6   PVMQANNVVEAEMAKFQERMNRSMMVCQDKFEAAKLQQQKTGAMTELESCVDQAIQESVQ 185
           PV+ ANNVVE EMAKFQER+NRS+MVCQDKFEAAKLQ+ KT A  ELE+CV+++I +S++
Sbjct: 67  PVLTANNVVETEMAKFQERLNRSLMVCQDKFEAAKLQKMKTHATEELEACVNRSIDDSIR 126

Query: 186 LLPHIVDKLKASLSIN 233
           +LPH+VD++K++LS+N
Sbjct: 127 VLPHLVDQIKSTLSMN 142


>ref|XP_002449223.1| hypothetical protein SORBIDRAFT_05g006580 [Sorghum bicolor]
           gi|241935066|gb|EES08211.1| hypothetical protein
           SORBIDRAFT_05g006580 [Sorghum bicolor]
          Length = 142

 Score =  111 bits (277), Expect = 7e-23
 Identities = 51/76 (67%), Positives = 69/76 (90%)
 Frame = +3

Query: 6   PVMQANNVVEAEMAKFQERMNRSMMVCQDKFEAAKLQQQKTGAMTELESCVDQAIQESVQ 185
           PV+ ANNVVE EMAKFQER+NRS+MVCQDK+EAAKLQ+ KT A  ELESCV+++I +S++
Sbjct: 67  PVLTANNVVENEMAKFQERLNRSLMVCQDKYEAAKLQKLKTDATQELESCVNRSIDDSIR 126

Query: 186 LLPHIVDKLKASLSIN 233
           +LPH+V+++K++LSIN
Sbjct: 127 VLPHVVEQIKSALSIN 142


>ref|XP_002269805.1| PREDICTED: protein FAM136A [Vitis vinifera]
           gi|147838243|emb|CAN73933.1| hypothetical protein
           VITISV_042801 [Vitis vinifera]
           gi|296083351|emb|CBI22987.3| unnamed protein product
           [Vitis vinifera]
          Length = 149

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/76 (69%), Positives = 66/76 (86%)
 Frame = +3

Query: 6   PVMQANNVVEAEMAKFQERMNRSMMVCQDKFEAAKLQQQKTGAMTELESCVDQAIQESVQ 185
           PV+ A  +VE EMAKFQER+NRS+MVCQDKFE+AKLQQ +T AM ++ESCVDQ+IQES++
Sbjct: 73  PVVNAQALVENEMAKFQERLNRSLMVCQDKFESAKLQQIRTDAMKDMESCVDQSIQESIK 132

Query: 186 LLPHIVDKLKASLSIN 233
            LPH+V +LK SLSIN
Sbjct: 133 TLPHVVARLKTSLSIN 148


>ref|XP_003577636.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Brachypodium distachyon]
          Length = 710

 Score =  109 bits (273), Expect = 2e-22
 Identities = 50/73 (68%), Positives = 65/73 (89%)
 Frame = +3

Query: 6   PVMQANNVVEAEMAKFQERMNRSMMVCQDKFEAAKLQQQKTGAMTELESCVDQAIQESVQ 185
           PV+ ANNVVE EMAKFQER+NRS+MVCQDKFEAAKLQ+ KT A  ELESCV ++I +S++
Sbjct: 73  PVLSANNVVETEMAKFQERLNRSLMVCQDKFEAAKLQKMKTDATQELESCVHRSIDDSIR 132

Query: 186 LLPHIVDKLKASL 224
           +LPH+VD++K++L
Sbjct: 133 VLPHVVDQIKSTL 145


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