BLASTX nr result

ID: Coptis24_contig00016641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016641
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272130.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   259   1e-67
ref|XP_002513074.1| Ubiquitin ligase SINAT5, putative [Ricinus c...   258   5e-67
ref|XP_004142422.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   257   8e-67
ref|XP_002303919.1| predicted protein [Populus trichocarpa] gi|1...   257   8e-67
gb|ADN34198.1| ubiquitin ligase SINAT5 [Cucumis melo subsp. melo]     256   1e-66

>ref|XP_002272130.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5 [Vitis vinifera]
           gi|147807603|emb|CAN68850.1| hypothetical protein
           VITISV_003067 [Vitis vinifera]
           gi|297742680|emb|CBI35133.3| unnamed protein product
           [Vitis vinifera]
          Length = 305

 Score =  259 bits (663), Expect = 1e-67
 Identities = 113/122 (92%), Positives = 117/122 (95%)
 Frame = +3

Query: 3   PIHQCINGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYESFGCLGIY 182
           PIHQC NGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKY+SFGCLGIY
Sbjct: 67  PIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSFGCLGIY 126

Query: 183 PYYSKLKHESQCTFRPYNCPYAGSECTAAGDIPFLVTHLKDDHKVDMHSGSTFNHRYVKS 362
           PYYSKLKHESQC +RPYNCPYAGSECT  GDIP+LV HLKDDHKVDMH+GSTFNHRYVKS
Sbjct: 127 PYYSKLKHESQCVYRPYNCPYAGSECTVIGDIPYLVAHLKDDHKVDMHNGSTFNHRYVKS 186

Query: 363 NP 368
           NP
Sbjct: 187 NP 188


>ref|XP_002513074.1| Ubiquitin ligase SINAT5, putative [Ricinus communis]
           gi|223548085|gb|EEF49577.1| Ubiquitin ligase SINAT5,
           putative [Ricinus communis]
          Length = 305

 Score =  258 bits (658), Expect = 5e-67
 Identities = 112/122 (91%), Positives = 116/122 (95%)
 Frame = +3

Query: 3   PIHQCINGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYESFGCLGIY 182
           PIHQC NGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKY SFGC+GIY
Sbjct: 67  PIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYHSFGCVGIY 126

Query: 183 PYYSKLKHESQCTFRPYNCPYAGSECTAAGDIPFLVTHLKDDHKVDMHSGSTFNHRYVKS 362
           PYYSKLKHESQC +RPYNCPYAGSECT  GDIP+LV HLKDDHKVDMH+GSTFNHRYVKS
Sbjct: 127 PYYSKLKHESQCVYRPYNCPYAGSECTVIGDIPYLVAHLKDDHKVDMHNGSTFNHRYVKS 186

Query: 363 NP 368
           NP
Sbjct: 187 NP 188


>ref|XP_004142422.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Cucumis
           sativus] gi|449524030|ref|XP_004169026.1| PREDICTED: E3
           ubiquitin-protein ligase SINAT5-like [Cucumis sativus]
          Length = 304

 Score =  257 bits (656), Expect = 8e-67
 Identities = 111/122 (90%), Positives = 118/122 (96%)
 Frame = +3

Query: 3   PIHQCINGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYESFGCLGIY 182
           PIHQC NGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKY++FGC+GIY
Sbjct: 66  PIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFGCVGIY 125

Query: 183 PYYSKLKHESQCTFRPYNCPYAGSECTAAGDIPFLVTHLKDDHKVDMHSGSTFNHRYVKS 362
           PYYSKLKHESQC +RPYNCPYAGSEC+  GDIPFLV+HLKDDHKVDMH+GSTFNHRYVKS
Sbjct: 126 PYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFNHRYVKS 185

Query: 363 NP 368
           NP
Sbjct: 186 NP 187


>ref|XP_002303919.1| predicted protein [Populus trichocarpa] gi|118483454|gb|ABK93626.1|
           unknown [Populus trichocarpa]
           gi|222841351|gb|EEE78898.1| predicted protein [Populus
           trichocarpa]
          Length = 305

 Score =  257 bits (656), Expect = 8e-67
 Identities = 112/122 (91%), Positives = 116/122 (95%)
 Frame = +3

Query: 3   PIHQCINGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYESFGCLGIY 182
           PIHQC NGHTLCSGCKPRV NRCPTCRHELGNIRCLALEKVAASLELPCKY+SFGC+GIY
Sbjct: 67  PIHQCSNGHTLCSGCKPRVQNRCPTCRHELGNIRCLALEKVAASLELPCKYQSFGCIGIY 126

Query: 183 PYYSKLKHESQCTFRPYNCPYAGSECTAAGDIPFLVTHLKDDHKVDMHSGSTFNHRYVKS 362
           PYYSKLKHESQC FRPYNCPYAGSECT  GDIP+LV HLKDDHKVDMH+GSTFNHRYVKS
Sbjct: 127 PYYSKLKHESQCVFRPYNCPYAGSECTVIGDIPYLVAHLKDDHKVDMHNGSTFNHRYVKS 186

Query: 363 NP 368
           NP
Sbjct: 187 NP 188


>gb|ADN34198.1| ubiquitin ligase SINAT5 [Cucumis melo subsp. melo]
          Length = 304

 Score =  256 bits (655), Expect = 1e-66
 Identities = 111/122 (90%), Positives = 117/122 (95%)
 Frame = +3

Query: 3   PIHQCINGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYESFGCLGIY 182
           PIHQC NGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKY++FGC+GIY
Sbjct: 66  PIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFGCVGIY 125

Query: 183 PYYSKLKHESQCTFRPYNCPYAGSECTAAGDIPFLVTHLKDDHKVDMHSGSTFNHRYVKS 362
           PYYSKLKHESQC +RPYNCPYAGSEC+  GDIPFLV HLKDDHKVDMH+GSTFNHRYVKS
Sbjct: 126 PYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVAHLKDDHKVDMHNGSTFNHRYVKS 185

Query: 363 NP 368
           NP
Sbjct: 186 NP 187


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