BLASTX nr result
ID: Coptis24_contig00016641
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00016641 (370 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272130.1| PREDICTED: E3 ubiquitin-protein ligase SINAT... 259 1e-67 ref|XP_002513074.1| Ubiquitin ligase SINAT5, putative [Ricinus c... 258 5e-67 ref|XP_004142422.1| PREDICTED: E3 ubiquitin-protein ligase SINAT... 257 8e-67 ref|XP_002303919.1| predicted protein [Populus trichocarpa] gi|1... 257 8e-67 gb|ADN34198.1| ubiquitin ligase SINAT5 [Cucumis melo subsp. melo] 256 1e-66 >ref|XP_002272130.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5 [Vitis vinifera] gi|147807603|emb|CAN68850.1| hypothetical protein VITISV_003067 [Vitis vinifera] gi|297742680|emb|CBI35133.3| unnamed protein product [Vitis vinifera] Length = 305 Score = 259 bits (663), Expect = 1e-67 Identities = 113/122 (92%), Positives = 117/122 (95%) Frame = +3 Query: 3 PIHQCINGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYESFGCLGIY 182 PIHQC NGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKY+SFGCLGIY Sbjct: 67 PIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSFGCLGIY 126 Query: 183 PYYSKLKHESQCTFRPYNCPYAGSECTAAGDIPFLVTHLKDDHKVDMHSGSTFNHRYVKS 362 PYYSKLKHESQC +RPYNCPYAGSECT GDIP+LV HLKDDHKVDMH+GSTFNHRYVKS Sbjct: 127 PYYSKLKHESQCVYRPYNCPYAGSECTVIGDIPYLVAHLKDDHKVDMHNGSTFNHRYVKS 186 Query: 363 NP 368 NP Sbjct: 187 NP 188 >ref|XP_002513074.1| Ubiquitin ligase SINAT5, putative [Ricinus communis] gi|223548085|gb|EEF49577.1| Ubiquitin ligase SINAT5, putative [Ricinus communis] Length = 305 Score = 258 bits (658), Expect = 5e-67 Identities = 112/122 (91%), Positives = 116/122 (95%) Frame = +3 Query: 3 PIHQCINGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYESFGCLGIY 182 PIHQC NGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKY SFGC+GIY Sbjct: 67 PIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYHSFGCVGIY 126 Query: 183 PYYSKLKHESQCTFRPYNCPYAGSECTAAGDIPFLVTHLKDDHKVDMHSGSTFNHRYVKS 362 PYYSKLKHESQC +RPYNCPYAGSECT GDIP+LV HLKDDHKVDMH+GSTFNHRYVKS Sbjct: 127 PYYSKLKHESQCVYRPYNCPYAGSECTVIGDIPYLVAHLKDDHKVDMHNGSTFNHRYVKS 186 Query: 363 NP 368 NP Sbjct: 187 NP 188 >ref|XP_004142422.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Cucumis sativus] gi|449524030|ref|XP_004169026.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Cucumis sativus] Length = 304 Score = 257 bits (656), Expect = 8e-67 Identities = 111/122 (90%), Positives = 118/122 (96%) Frame = +3 Query: 3 PIHQCINGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYESFGCLGIY 182 PIHQC NGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKY++FGC+GIY Sbjct: 66 PIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFGCVGIY 125 Query: 183 PYYSKLKHESQCTFRPYNCPYAGSECTAAGDIPFLVTHLKDDHKVDMHSGSTFNHRYVKS 362 PYYSKLKHESQC +RPYNCPYAGSEC+ GDIPFLV+HLKDDHKVDMH+GSTFNHRYVKS Sbjct: 126 PYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFNHRYVKS 185 Query: 363 NP 368 NP Sbjct: 186 NP 187 >ref|XP_002303919.1| predicted protein [Populus trichocarpa] gi|118483454|gb|ABK93626.1| unknown [Populus trichocarpa] gi|222841351|gb|EEE78898.1| predicted protein [Populus trichocarpa] Length = 305 Score = 257 bits (656), Expect = 8e-67 Identities = 112/122 (91%), Positives = 116/122 (95%) Frame = +3 Query: 3 PIHQCINGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYESFGCLGIY 182 PIHQC NGHTLCSGCKPRV NRCPTCRHELGNIRCLALEKVAASLELPCKY+SFGC+GIY Sbjct: 67 PIHQCSNGHTLCSGCKPRVQNRCPTCRHELGNIRCLALEKVAASLELPCKYQSFGCIGIY 126 Query: 183 PYYSKLKHESQCTFRPYNCPYAGSECTAAGDIPFLVTHLKDDHKVDMHSGSTFNHRYVKS 362 PYYSKLKHESQC FRPYNCPYAGSECT GDIP+LV HLKDDHKVDMH+GSTFNHRYVKS Sbjct: 127 PYYSKLKHESQCVFRPYNCPYAGSECTVIGDIPYLVAHLKDDHKVDMHNGSTFNHRYVKS 186 Query: 363 NP 368 NP Sbjct: 187 NP 188 >gb|ADN34198.1| ubiquitin ligase SINAT5 [Cucumis melo subsp. melo] Length = 304 Score = 256 bits (655), Expect = 1e-66 Identities = 111/122 (90%), Positives = 117/122 (95%) Frame = +3 Query: 3 PIHQCINGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYESFGCLGIY 182 PIHQC NGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKY++FGC+GIY Sbjct: 66 PIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFGCVGIY 125 Query: 183 PYYSKLKHESQCTFRPYNCPYAGSECTAAGDIPFLVTHLKDDHKVDMHSGSTFNHRYVKS 362 PYYSKLKHESQC +RPYNCPYAGSEC+ GDIPFLV HLKDDHKVDMH+GSTFNHRYVKS Sbjct: 126 PYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVAHLKDDHKVDMHNGSTFNHRYVKS 185 Query: 363 NP 368 NP Sbjct: 186 NP 187