BLASTX nr result

ID: Coptis24_contig00016640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016640
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142422.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   174   9e-42
gb|ADN34198.1| ubiquitin ligase SINAT5 [Cucumis melo subsp. melo]     174   9e-42
ref|XP_003546723.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   173   1e-41
ref|XP_002513074.1| Ubiquitin ligase SINAT5, putative [Ricinus c...   173   2e-41
ref|XP_004143754.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   172   2e-41

>ref|XP_004142422.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Cucumis
           sativus] gi|449524030|ref|XP_004169026.1| PREDICTED: E3
           ubiquitin-protein ligase SINAT5-like [Cucumis sativus]
          Length = 304

 Score =  174 bits (440), Expect = 9e-42
 Identities = 80/86 (93%), Positives = 85/86 (98%)
 Frame = -2

Query: 258 VFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYNYSLEVGANGRKIVWQGVPR 79
           VFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNY+YSLEVG NGRK+VWQGVPR
Sbjct: 199 VFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPR 258

Query: 78  SIRDTHKKVRDSFDGLIIERNMALFF 1
           SIRD+H+KVRDSFDGLII+RNMALFF
Sbjct: 259 SIRDSHRKVRDSFDGLIIQRNMALFF 284


>gb|ADN34198.1| ubiquitin ligase SINAT5 [Cucumis melo subsp. melo]
          Length = 304

 Score =  174 bits (440), Expect = 9e-42
 Identities = 80/86 (93%), Positives = 85/86 (98%)
 Frame = -2

Query: 258 VFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYNYSLEVGANGRKIVWQGVPR 79
           VFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNY+YSLEVG NGRK+VWQGVPR
Sbjct: 199 VFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPR 258

Query: 78  SIRDTHKKVRDSFDGLIIERNMALFF 1
           SIRD+H+KVRDSFDGLII+RNMALFF
Sbjct: 259 SIRDSHRKVRDSFDGLIIQRNMALFF 284


>ref|XP_003546723.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Glycine max]
          Length = 304

 Score =  173 bits (439), Expect = 1e-41
 Identities = 79/86 (91%), Positives = 85/86 (98%)
 Frame = -2

Query: 258 VFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYNYSLEVGANGRKIVWQGVPR 79
           VFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNY+YSLEVG NGRK++WQGVPR
Sbjct: 199 VFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMIWQGVPR 258

Query: 78  SIRDTHKKVRDSFDGLIIERNMALFF 1
           SIRD+H+KVRDSFDGLII+RNMALFF
Sbjct: 259 SIRDSHRKVRDSFDGLIIQRNMALFF 284


>ref|XP_002513074.1| Ubiquitin ligase SINAT5, putative [Ricinus communis]
           gi|223548085|gb|EEF49577.1| Ubiquitin ligase SINAT5,
           putative [Ricinus communis]
          Length = 305

 Score =  173 bits (438), Expect = 2e-41
 Identities = 79/86 (91%), Positives = 84/86 (97%)
 Frame = -2

Query: 258 VFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYNYSLEVGANGRKIVWQGVPR 79
           VFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNY YSLEVG NGRK++WQGVPR
Sbjct: 200 VFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYTYSLEVGGNGRKMIWQGVPR 259

Query: 78  SIRDTHKKVRDSFDGLIIERNMALFF 1
           SIRD+H+KVRDSFDGLII+RNMALFF
Sbjct: 260 SIRDSHRKVRDSFDGLIIQRNMALFF 285


>ref|XP_004143754.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Cucumis
           sativus] gi|449516798|ref|XP_004165433.1| PREDICTED: E3
           ubiquitin-protein ligase SINAT5-like [Cucumis sativus]
          Length = 305

 Score =  172 bits (437), Expect = 2e-41
 Identities = 79/86 (91%), Positives = 85/86 (98%)
 Frame = -2

Query: 258 VFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYNYSLEVGANGRKIVWQGVPR 79
           VFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDN+AKNY+YSLEVG NGRK+VWQGVPR
Sbjct: 200 VFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNDAKNYSYSLEVGGNGRKMVWQGVPR 259

Query: 78  SIRDTHKKVRDSFDGLIIERNMALFF 1
           SIRD+H+KVRDSFDGLII+RNMALFF
Sbjct: 260 SIRDSHRKVRDSFDGLIIQRNMALFF 285


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